RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 SEPT7Q16181 437 aaKnown RBP3.92□□□□□ -1.78
VMP1-216ENST00000592790 SFMBT2Q5VUG0 894 aa3.92□□□□□ -1.78
VMP1-216ENST00000592790 PIK3AP1Q6ZUJ8 805 aa3.92□□□□□ -1.78
VMP1-216ENST00000592790 STOX1Q6ZVD7 989 aa3.92□□□□□ -1.78
VMP1-216ENST00000592790 METTL16Q86W50 562 aaKnown RBP3.92□□□□□ -1.78
VMP1-216ENST00000592790 BLIDQ8IZY5 108 aa3.92□□□□□ -1.78
VMP1-216ENST00000592790 TC2NQ8N9U0 490 aa3.92□□□□□ -1.78
VMP1-216ENST00000592790 EIF3CQ99613 913 aaKnown RBP3.92□□□□□ -1.78
VMP1-216ENST00000592790 NT5C3AQ9H0P0 336 aa3.92□□□□□ -1.78
VMP1-216ENST00000592790 PPP1R1BQ9UD71 204 aaPredicted RBP3.92□□□□□ -1.78
VMP1-216ENST00000592790 STK17AQ9UEE5 414 aa3.92□□□□□ -1.78
VMP1-216ENST00000592790 KCNJ14Q9UNX9 436 aa3.92□□□□□ -1.78
VMP1-216ENST00000592790 UTP11Q9Y3A2 253 aaKnown RBP3.92□□□□□ -1.78
VMP1-216ENST00000592790 NALCNQ8IZF0 1738 aa3.92□□□□□ -1.78
VMP1-216ENST00000592790 SPEF2Q9C093 1822 aa3.92□□□□□ -1.78
VMP1-216ENST00000592790 PSMD14O00487 310 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 KIF1CO43896 1103 aaKnown RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 CTDNEP1O95476 244 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 SSBP05455 408 aaKnown RBP eCLIP3.91□□□□□ -1.78
VMP1-216ENST00000592790 CCNE1P24864 410 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 RFX5P48382 616 aaPredicted RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 ITIH3Q06033 890 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 ST3GAL1Q11201 340 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CUL1Q13616 776 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 KRT31Q15323 416 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 ASIC2Q16515 512 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 NBPF9Q3BBW0 867 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 LRRC24Q50LG9 513 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 NT5DC1Q5TFE4 455 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CABP7Q86V35 215 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 MB21D1Q8N884 522 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 C3orf20Q8ND61 904 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 ZNF594Q96JF6 807 aaPredicted RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 PBKQ96KB5 322 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 FUT8Q9BYC5 575 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 TRIM7Q9C029 511 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 NYXQ9GZU5 481 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 ARMT1Q9H993 441 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 SAMSN1Q9NSI8 373 aaKnown RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 FEZ2Q9UHY8 353 aaPredicted RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 TNKSO95271 1327 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 GPTP24298 496 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 EIF3BP55884 814 aaKnown RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 PTGDRQ13258 359 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 BIRC3Q13489 604 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 RPS6KA1Q15418 735 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 E2F4Q16254 413 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 GKAP1Q5VSY0 366 aaPredicted RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 HEATR3Q7Z4Q2 680 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CACNA2D3Q8IZS8 1091 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CCHCR1Q8TD31 782 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 IFT81Q8WYA0 676 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 P2RX5Q93086 422 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 TUBGCP2Q9BSJ2 902 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CDCA7Q9BWT1 371 aaPredicted RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 ADD3Q9UEY8 706 aaKnown RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 FBXO2Q9UK22 296 aaPredicted RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 MTUS1Q9ULD2 1270 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 DIS3Q9Y2L1 958 aaKnown RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 NDUFB9Q9Y6M9 179 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 PNPLA7Q6ZV29 1317 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 LRRC37A3O60309 1634 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 TSPOAP1O95153 1857 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 ERVV-1B6SEH8 477 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CETN3O15182 167 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 RGPD1P0DJD0 1748 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 FDPSP14324 419 aaKnown RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 HSPA6P17066 643 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 ANXA13P27216 316 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CORO7P57737 925 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 LACTBP83111 547 aaPredicted RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 LRRC63Q05C16 580 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 TBX2Q13207 712 aaPredicted RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 NEDD9Q14511 834 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 NCAPHQ15003 741 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 MAN2A1Q16706 1144 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 UBN2Q6ZU65 1347 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 USP37Q86T82 979 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 DZIP3Q86Y13 1208 aaKnown RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 DRC1Q96MC2 740 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 WDR24Q96S15 920 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 STRBPQ96SI9 672 aaKnown RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 ZHX3Q9H4I2 956 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 LY9Q9HBG7 655 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 GOPCQ9HD26 462 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 FAM114A2Q9NRY5 505 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 ATP8A2Q9NTI2 1148 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 STIM2Q9P246 746 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CAPN11Q9UMQ6 739 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CAPN7Q9Y6W3 813 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 TOPAZ1Q8N9V7 1692 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 A0A1W2PQJ5 194 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 TMEM232C9JQI7 657 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CCDC188H7C350 402 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CHUKO15111 745 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 SLC26A4O43511 780 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CALUO43852 315 aaPredicted RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 TBCAO75347 108 aaKnown RBP3.91□□□□□ -1.78
VMP1-216ENST00000592790 PRLRP16471 622 aa3.91□□□□□ -1.78
VMP1-216ENST00000592790 CCT5P48643 541 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms