RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 KIF23Q02241 960 aaPredicted RBP14.06□□□□□ -0.16
DNMT1-228ENST00000592705 FAM47AQ5JRC9 791 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 TYW1BQ6NUM6 668 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 APOA5Q6Q788 366 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 CEP57Q86XR8 500 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 CMTR1Q8N1G2 835 aaKnown RBP14.06□□□□□ -0.16
DNMT1-228ENST00000592705 RNF169Q8NCN4 708 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 NACA2Q9H009 215 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 INPP5BP32019 993 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 STRN3Q13033 797 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 ARHGEF16Q5VV41 709 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 GSDMAQ96QA5 445 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.06□□□□□ -0.16
DNMT1-228ENST00000592705 MRPL11Q9Y3B7 192 aaKnown RBP14.06□□□□□ -0.16
DNMT1-228ENST00000592705 USP17L12C9JPN9 530 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 USP17L21D6R901 530 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 SCG2P13521 617 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 GJC1P36383 396 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 CCDC6Q16204 474 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 KRT26Q7Z3Y9 468 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 ABI1Q8IZP0 508 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 UBL4BQ8N7F7 174 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 KIFAP3Q92845 792 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 COA1Q9GZY4 146 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 KCNG1Q9UIX4 513 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 CHMP2AO43633 222 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 BIRC2Q13490 618 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 RPS6KA1Q15418 735 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 ZSCAN26Q16670 478 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 CEP128Q6ZU80 1094 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 RRAGAQ7L523 313 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 NT5C3AQ9H0P0 336 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 KCNK9Q9NPC2 374 aa14.06□□□□□ -0.16
DNMT1-228ENST00000592705 PALM3A6NDB9 673 aaPredicted RBP14.05□□□□□ -0.16
DNMT1-228ENST00000592705 SASH1O94885 1247 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 LONP1P36776 959 aaKnown RBP14.05□□□□□ -0.16
DNMT1-228ENST00000592705 MTMR3Q13615 1198 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 FAM207AQ9NSI2 230 aaPredicted RBP14.05□□□□□ -0.16
DNMT1-228ENST00000592705 ADD3Q9UEY8 706 aaKnown RBP14.05□□□□□ -0.16
DNMT1-228ENST00000592705 TRPC6Q9Y210 931 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 RNF17Q9BXT8 1623 aaKnown RBP14.05□□□□□ -0.16
DNMT1-228ENST00000592705 CEP104O60308 925 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 PDE8BO95263 885 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 RNASE9P60153 205 aaKnown RBP14.05□□□□□ -0.16
DNMT1-228ENST00000592705 SYMPKQ92797 1274 aaKnown RBP14.05□□□□□ -0.16
DNMT1-228ENST00000592705 PUS3Q9BZE2 481 aaKnown RBP14.05□□□□□ -0.16
DNMT1-228ENST00000592705 CEP83Q9Y592 693 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 PTPRMP28827 1452 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 PNPLA6Q8IY17 1366 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 ADORA1P30542 326 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 ARHGAP25P42331 645 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 PLCB3Q01970 1234 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 TBC1D10BQ4KMP7 808 aaPredicted RBP14.05□□□□□ -0.16
DNMT1-228ENST00000592705 ELMSAN1Q6PJG2 1045 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 DNM3Q9UQ16 869 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 RPN1P04843 607 aaKnown RBP14.05□□□□□ -0.16
DNMT1-228ENST00000592705 PTPN12Q05209 780 aaKnown RBP14.05□□□□□ -0.16
DNMT1-228ENST00000592705 SETDB1Q15047 1291 aa14.05□□□□□ -0.16
DNMT1-228ENST00000592705 SMCO2A6NFE2 343 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 SPOPO43791 374 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 SYNE4Q8N205 404 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 TSNARE1Q96NA8 513 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 SPTLC3Q9NUV7 552 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 SETBP1Q9Y6X0 1596 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 CCDC169A6NNP5 214 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 DMTNQ08495 405 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 SREK1Q8WXA9 508 aaKnown RBP14.04□□□□□ -0.16
DNMT1-228ENST00000592705 PDLIM2Q96JY6 352 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 FNBP1Q96RU3 617 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.04□□□□□ -0.16
DNMT1-228ENST00000592705 NKIRAS1Q9NYS0 192 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 HYOU1Q9Y4L1 999 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 APOBEC3FQ8IUX4 373 aaKnown RBP14.04□□□□□ -0.16
DNMT1-228ENST00000592705 RNF26Q9BY78 433 aaPredicted RBP14.04□□□□□ -0.16
DNMT1-228ENST00000592705 MED4Q9NPJ6 270 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 MYO1AQ9UBC5 1043 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 CDC23Q9UJX2 597 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 KDM3AQ9Y4C1 1321 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 SARM1Q6SZW1 724 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 SRGAP1Q7Z6B7 1085 aa14.04□□□□□ -0.16
DNMT1-228ENST00000592705 ARHGEF35A5YM69 484 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 ATP2A2P16615 1042 aaKnown RBP14.03□□□□□ -0.16
DNMT1-228ENST00000592705 TRAPPC10P48553 1259 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 COPB1P53618 953 aaKnown RBP14.03□□□□□ -0.16
DNMT1-228ENST00000592705 NCAPH2Q6IBW4 605 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 KLHL7Q8IXQ5 586 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 CSRNP2Q9H175 543 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 MAGEF1Q9HAY2 307 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 PSMB7Q99436 277 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 FTOQ9C0B1 505 aaKnown RBP eCLIP14.03□□□□□ -0.169e-7■■■□□ 15.1
DNMT1-228ENST00000592705 EPN1Q9Y6I3 576 aaPredicted RBP14.03□□□□□ -0.16
DNMT1-228ENST00000592705 QRICH2Q9H0J4 1663 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 TESPA1A2RU30 521 aaPredicted RBP14.03□□□□□ -0.16
DNMT1-228ENST00000592705 TMOD1P28289 359 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 PTGDRQ13258 359 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 SDR42E1Q8WUS8 393 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 LRFN2Q9ULH4 789 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 PRAMEF22A3QJZ6 481 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 ADD2P35612 726 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 ECE1P42892 770 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms