RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 LRRC41Q15345 812 aa11.42□□□□□ -0.58
PRKCSH-215ENST00000592435 IMMTQ16891 758 aaKnown RBP11.42□□□□□ -0.58
PRKCSH-215ENST00000592435 CCDC178Q5BJE1 867 aa11.42□□□□□ -0.58
PRKCSH-215ENST00000592435 TTC22Q5TAA0 569 aa11.42□□□□□ -0.58
PRKCSH-215ENST00000592435 ANO1Q5XXA6 986 aa11.42□□□□□ -0.58
PRKCSH-215ENST00000592435 CHMP4CQ96CF2 233 aa11.42□□□□□ -0.58
PRKCSH-215ENST00000592435 TRERF1Q96PN7 1200 aa11.42□□□□□ -0.58
PRKCSH-215ENST00000592435 GDF15Q99988 308 aa11.42□□□□□ -0.58
PRKCSH-215ENST00000592435 ACAD9Q9H845 621 aa11.42□□□□□ -0.58
PRKCSH-215ENST00000592435 XPNPEP3Q9NQH7 507 aa11.42□□□□□ -0.58
PRKCSH-215ENST00000592435 FAM184BQ9ULE4 1060 aa11.42□□□□□ -0.58
PRKCSH-215ENST00000592435 POTEB2H3BUK9 544 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 ICAM1P05362 532 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 SNHG28P0DPA3 235 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 PDHBP11177 359 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 GSPT1P15170 499 aaKnown RBP11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 ACVR2BQ13705 512 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 CCDC96Q2M329 555 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 TTBK2Q6IQ55 1244 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 SLC39A5Q6ZMH5 540 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 RNF180Q86T96 592 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 IQCA1Q86XH1 822 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 FAM133AQ8N9E0 248 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 ANKS1AQ92625 1134 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 RANBP17Q9H2T7 1088 aaKnown RBP11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 ABHD16BQ9H3Z7 469 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 A1CFQ9NQ94 594 aaKnown RBP11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 HOMER2Q9NSB8 354 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 RNF146Q9NTX7 359 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 PCDH10Q9P2E7 1040 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 PNMA2Q9UL42 364 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 ZMYND8Q9ULU4 1186 aaPredicted RBP11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 MTMR7Q9Y216 660 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 DNAH12Q6ZR08 3092 aa11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 RANBP2P49792 3224 aaKnown RBP11.41□□□□□ -0.58
PRKCSH-215ENST00000592435 NEDD4P46934 1319 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 CEP290O15078 2479 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 KDM4AO75164 1064 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 ALAS1P13196 640 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 SYN1P17600 705 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 SLC16A2P36021 539 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 ADCYAP1R1P41586 468 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 ATN1P54259 1190 aaPredicted RBP11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 SNAP25P60880 206 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 CNTN2Q02246 1040 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 ZNF543Q08ER8 600 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 GPATCH4Q5T3I0 446 aaKnown RBP11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 SYDE2Q5VT97 1194 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 C1orf53Q5VUE5 145 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 CCDC174Q6PII3 467 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 RASGRP2Q7LDG7 609 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 RUFY2Q8WXA3 655 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 FGD4Q96M96 766 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 CNNM2Q9H8M5 875 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 GPCPD1Q9NPB8 672 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 ZSWIM5Q9P217 1185 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 CCPG1Q9ULG6 757 aa11.4□□□□□ -0.58
PRKCSH-215ENST00000592435 FRMPD2Q68DX3 1309 aaPredicted RBP11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 RAD50Q92878 1312 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 ZNFX1Q9P2E3 1918 aaKnown RBP11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 ASB14A6NK59 587 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 DUSP11O75319 330 aaKnown RBP11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 PGK1P00558 417 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 CHMLP26374 656 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 SNX17Q15036 470 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 MUM1L1Q5H9M0 696 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 ARMCX2Q7L311 632 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 CCDC144CPQ8IYA2 1237 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 ZSCAN10Q96SZ4 725 aaPredicted RBP11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 ZKSCAN3Q9BRR0 538 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 TSEN34Q9BSV6 310 aaKnown RBP11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 KRT23Q9C075 422 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 IL25Q9H293 177 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 CYP39A1Q9NYL5 469 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 PHF24Q9UPV7 400 aa11.39□□□□□ -0.59
PRKCSH-215ENST00000592435 SOWAHBA6NEL2 793 aa11.38□□□□□ -0.59
PRKCSH-215ENST00000592435 B4E1Z4 1266 aa11.38□□□□□ -0.59
PRKCSH-215ENST00000592435 ADAMTS4O75173 837 aa11.38□□□□□ -0.59
PRKCSH-215ENST00000592435 MAGEA10P43363 369 aaPredicted RBP11.38□□□□□ -0.59
PRKCSH-215ENST00000592435 RTP1P59025 263 aa11.38□□□□□ -0.59
PRKCSH-215ENST00000592435 CCDC144BQ3MJ40 725 aa11.38□□□□□ -0.59
PRKCSH-215ENST00000592435 PNMA1Q8ND90 353 aa11.38□□□□□ -0.59
PRKCSH-215ENST00000592435 KLHDC9Q8NEP7 349 aa11.38□□□□□ -0.59
PRKCSH-215ENST00000592435 KAT14Q9H8E8 782 aa11.38□□□□□ -0.59
PRKCSH-215ENST00000592435 ZHX1Q9UKY1 873 aaPredicted RBP11.38□□□□□ -0.59
PRKCSH-215ENST00000592435 ALPK3Q96L96 1907 aa11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 LOC102724159A0A0B4J2E5 919 aa11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 MOXD2PA6NHM9 499 aa11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 CST5P28325 142 aaPredicted RBP11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 ACLYP53396 1101 aa11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 NKX3-2P78367 333 aa11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 PWP2Q15269 919 aaKnown RBP11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 CCSAPQ6IQ19 270 aaPredicted RBP11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 ENAHQ8N8S7 591 aaPredicted RBP11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 NUP133Q8WUM0 1156 aa11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 FERMT2Q96AC1 680 aa11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 LBHD1Q9BQE6 289 aaPredicted RBP11.37□□□□□ -0.59
PRKCSH-215ENST00000592435 UBE2OQ9C0C9 1292 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms