RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 Q6ZUG5 572 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 GPR142Q7Z601 462 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 PLEKHH3Q7Z736 793 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 CCAR1Q8IX12 1150 aaKnown RBP11.33□□□□□ -0.6
TPM4-215ENST00000592138 CTCFLQ8NI51 663 aaPredicted RBP11.33□□□□□ -0.6
TPM4-215ENST00000592138 MTMR8Q96EF0 704 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 LZTS2Q9BRK4 669 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 LRRC2Q9BYS8 371 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 MAF1Q9H063 256 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 RIOX1Q9H6W3 641 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 GPCPD1Q9NPB8 672 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 GPHNQ9NQX3 736 aaPredicted RBP11.33□□□□□ -0.6
TPM4-215ENST00000592138 ZNF536O15090 1300 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 ZBTB43O43298 467 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 PEX10O60683 326 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 GOLGA8HP0CJ92 632 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 CPA1P15085 419 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 ERCC3P19447 782 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 PTPREP23469 700 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 SLC16A2P36021 539 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 GRB14Q14449 540 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 MORN1Q5T089 497 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 SNRNP48Q6IEG0 339 aaKnown RBP11.32□□□□□ -0.6
TPM4-215ENST00000592138 ADGRF4Q8IZF3 695 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 STAG2Q8N3U4 1231 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 FANCBQ8NB91 859 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 BRF1Q92994 677 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 TCEANC2Q96MN5 208 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 SPZ1Q9BXG8 430 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 C22orf23Q9BZE7 217 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 RBM28Q9NW13 759 aaKnown RBP11.32□□□□□ -0.6
TPM4-215ENST00000592138 FBXO40Q9UH90 709 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 GJD2Q9UKL4 321 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 PTPN22Q9Y2R2 807 aa11.32□□□□□ -0.6
TPM4-215ENST00000592138 RANBP2P49792 3224 aaKnown RBP11.31□□□□□ -0.6
TPM4-215ENST00000592138 ZNF236Q9UL36 1845 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 KLF18A0A0U1RQI7 1052 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 SLC15A5A6NIM6 579 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 HOXC6P09630 235 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 XRCC5P13010 732 aaKnown RBP11.31□□□□□ -0.6
TPM4-215ENST00000592138 SOX10P56693 466 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 PRKCZQ05513 592 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 TRAF1Q13077 416 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 TOB2Q14106 344 aaPredicted RBP11.31□□□□□ -0.6
TPM4-215ENST00000592138 PLS1Q14651 629 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 ANKRD1Q15327 319 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 SAMD1Q6SPF0 538 aaPredicted RBP11.31□□□□□ -0.6
TPM4-215ENST00000592138 MICU3Q86XE3 530 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 NUP133Q8WUM0 1156 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 USP6NLQ92738 828 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 BACH2Q9BYV9 841 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 UPF3BQ9BZI7 483 aaKnown RBP11.31□□□□□ -0.6
TPM4-215ENST00000592138 JMJD4Q9H9V9 463 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 CWC22Q9HCG8 908 aaKnown RBP11.31□□□□□ -0.6
TPM4-215ENST00000592138 RAVER2Q9HCJ3 691 aaKnown RBP11.31□□□□□ -0.6
TPM4-215ENST00000592138 PDRG1Q9NUG6 133 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 BRPF3Q9ULD4 1205 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 IVNS1ABPQ9Y6Y0 642 aa11.31□□□□□ -0.6
TPM4-215ENST00000592138 CCDC196A0A1B0GTZ2 297 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 ZBTB5O15062 677 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 FCER1AP12319 257 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 FLT3LGP49771 235 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 CDC37Q16543 378 aaPredicted RBP11.3□□□□□ -0.6
TPM4-215ENST00000592138 TMTC3Q6ZXV5 915 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 NCAPG2Q86XI2 1143 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 TRMT44Q8IYL2 757 aaKnown RBP11.3□□□□□ -0.6
TPM4-215ENST00000592138 CPXCR1Q8N123 301 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 SLAIN1Q8ND83 568 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 PXYLP1Q8TE99 480 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 CHMP4CQ96CF2 233 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 ZNF274Q96GC6 653 aaPredicted RBP11.3□□□□□ -0.6
TPM4-215ENST00000592138 MYL10Q9BUA6 226 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 UBA5Q9GZZ9 404 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 ACAD9Q9H845 621 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 CCPG1Q9ULG6 757 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 RIPK3Q9Y572 518 aa11.3□□□□□ -0.6
TPM4-215ENST00000592138 CEP290O15078 2479 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 GOLGA8AA7E2F4 631 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 GOLGA8BA8MQT2 603 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 CYTH3O43739 400 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 ADORA2AP29274 412 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 RGS2P41220 211 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 METAP2P50579 478 aaKnown RBP eCLIP11.29□□□□□ -0.6
TPM4-215ENST00000592138 APOBRQ0VD83 1088 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 MAP2K5Q13163 448 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 KCTD2Q14681 263 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 RTN1Q16799 776 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 QRICH1Q2TAL8 776 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 CCDC174Q6PII3 467 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 RAET1EQ8TD07 263 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 AGBL1Q96MI9 1066 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 TBC1D32Q96NH3 1257 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 KIF2CQ99661 725 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 APBA2Q99767 749 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 CPVLQ9H3G5 476 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 SLC5A4Q9NY91 659 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 GABRQQ9UN88 632 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms