RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 RRP12Q5JTH9 1297 aaKnown RBP20.51■□□□□ 0.87
CIRBP-235ENST00000591935 KCTD1Q719H9 257 aa20.51■□□□□ 0.87
CIRBP-235ENST00000591935 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.51■□□□□ 0.87
CIRBP-235ENST00000591935 CHST13Q8NET6 341 aa20.51■□□□□ 0.87
CIRBP-235ENST00000591935 STAG1Q8WVM7 1258 aa20.51■□□□□ 0.87
CIRBP-235ENST00000591935 CNPY2Q9Y2B0 182 aa20.51■□□□□ 0.87
CIRBP-235ENST00000591935 PLA2G6O60733 806 aa20.5■□□□□ 0.87
CIRBP-235ENST00000591935 MYCNP04198 464 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-235ENST00000591935 RARBP10826 455 aa20.5■□□□□ 0.87
CIRBP-235ENST00000591935 RBM25P49756 843 aaKnown RBP20.5■□□□□ 0.87
CIRBP-235ENST00000591935 SNAP25P60880 206 aa20.5■□□□□ 0.87
CIRBP-235ENST00000591935 RCSD1Q6JBY9 416 aa20.5■□□□□ 0.87
CIRBP-235ENST00000591935 TOMM22Q9NS69 142 aa20.5■□□□□ 0.87
CIRBP-235ENST00000591935 MTMR7Q9Y216 660 aa20.5■□□□□ 0.87
CIRBP-235ENST00000591935 ZNF536O15090 1300 aa20.5■□□□□ 0.87
CIRBP-235ENST00000591935 ZMYM6O95789 1325 aa20.5■□□□□ 0.87
CIRBP-235ENST00000591935 SYNGAP1Q96PV0 1343 aa20.5■□□□□ 0.87
CIRBP-235ENST00000591935 ZNF865P0CJ78 1059 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-235ENST00000591935 GSPT1P15170 499 aaKnown RBP20.49■□□□□ 0.87
CIRBP-235ENST00000591935 MAGEA10P43363 369 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-235ENST00000591935 IKQ13123 557 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-235ENST00000591935 ZNF467Q7Z7K2 595 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-235ENST00000591935 ANKRD35Q8N283 1001 aa20.49■□□□□ 0.87
CIRBP-235ENST00000591935 FGD4Q96M96 766 aa20.49■□□□□ 0.87
CIRBP-235ENST00000591935 AGBL1Q96MI9 1066 aa20.49■□□□□ 0.87
CIRBP-235ENST00000591935 LAMA3Q16787 3333 aa20.48■□□□□ 0.87
CIRBP-235ENST00000591935 SNAI1O95863 264 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-235ENST00000591935 PCP11498 1178 aaKnown RBP20.48■□□□□ 0.87
CIRBP-235ENST00000591935 AKR1A1P14550 325 aa20.48■□□□□ 0.87
CIRBP-235ENST00000591935 LRRC41Q15345 812 aa20.48■□□□□ 0.87
CIRBP-235ENST00000591935 CWC27Q6UX04 472 aaKnown RBP20.48■□□□□ 0.87
CIRBP-235ENST00000591935 MAMDC4Q6UXC1 1216 aa20.48■□□□□ 0.87
CIRBP-235ENST00000591935 XPNPEP3Q9NQH7 507 aa20.48■□□□□ 0.87
CIRBP-235ENST00000591935 HOMER2Q9NSB8 354 aa20.48■□□□□ 0.87
CIRBP-235ENST00000591935 PRKAG2Q9UGJ0 569 aa20.48■□□□□ 0.87
CIRBP-235ENST00000591935 PRR12Q9ULL5 1215 aa20.48■□□□□ 0.87
CIRBP-235ENST00000591935 ADCYAP1R1P41586 468 aa20.47■□□□□ 0.87
CIRBP-235ENST00000591935 TKFCQ3LXA3 575 aa20.47■□□□□ 0.87
CIRBP-235ENST00000591935 TTBK2Q6IQ55 1244 aa20.47■□□□□ 0.87
CIRBP-235ENST00000591935 RNF180Q86T96 592 aa20.47■□□□□ 0.87
CIRBP-235ENST00000591935 TBC1D10CQ8IV04 446 aa20.47■□□□□ 0.87
CIRBP-235ENST00000591935 LENG1Q96BZ8 264 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-235ENST00000591935 TMEM47Q9BQJ4 181 aa20.47■□□□□ 0.87
CIRBP-235ENST00000591935 TCP11L1Q9NUJ3 509 aa20.47■□□□□ 0.87
CIRBP-235ENST00000591935 HIP1O00291 1037 aa20.46■□□□□ 0.87
CIRBP-235ENST00000591935 PGK1P00558 417 aa20.46■□□□□ 0.87
CIRBP-235ENST00000591935 AKNAD1Q5T1N1 836 aa20.46■□□□□ 0.87
CIRBP-235ENST00000591935 CASC1Q6TDU7 716 aa20.46■□□□□ 0.87
CIRBP-235ENST00000591935 SLC39A5Q6ZMH5 540 aa20.46■□□□□ 0.87
CIRBP-235ENST00000591935 FERMT2Q96AC1 680 aa20.46■□□□□ 0.87
CIRBP-235ENST00000591935 LBHD1Q9BQE6 289 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-235ENST00000591935 UBE2OQ9C0C9 1292 aaKnown RBP20.46■□□□□ 0.87
CIRBP-235ENST00000591935 LAMA4Q16363 1823 aa20.46■□□□□ 0.87
CIRBP-235ENST00000591935 SOX1O00570 391 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-235ENST00000591935 SLC16A2P36021 539 aa20.45■□□□□ 0.86
CIRBP-235ENST00000591935 NT5C2P49902 561 aa20.45■□□□□ 0.86
CIRBP-235ENST00000591935 RTP1P59025 263 aa20.45■□□□□ 0.86
CIRBP-235ENST00000591935 CNTN2Q02246 1040 aa20.45■□□□□ 0.86
CIRBP-235ENST00000591935 CCDC174Q6PII3 467 aa20.45■□□□□ 0.86
CIRBP-235ENST00000591935 MFSD6Q6ZSS7 791 aa20.45■□□□□ 0.86
CIRBP-235ENST00000591935 TDHQ8IZJ6 230 aa20.45■□□□□ 0.86
CIRBP-235ENST00000591935 DCAF4Q8WV16 495 aa20.45■□□□□ 0.86
CIRBP-235ENST00000591935 RNF41Q9H4P4 317 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-235ENST00000591935 ACAD9Q9H845 621 aa20.45■□□□□ 0.86
CIRBP-235ENST00000591935 DIAPH3Q9NSV4 1193 aa20.45■□□□□ 0.86
CIRBP-235ENST00000591935 FAM184BQ9ULE4 1060 aa20.45■□□□□ 0.86
CIRBP-235ENST00000591935 TOP1P11387 765 aaKnown RBP20.44■□□□□ 0.86
CIRBP-235ENST00000591935 CCDC96Q2M329 555 aa20.44■□□□□ 0.86
CIRBP-235ENST00000591935 C1orf53Q5VUE5 145 aa20.44■□□□□ 0.86
CIRBP-235ENST00000591935 TTC14Q96N46 770 aa20.44■□□□□ 0.86
CIRBP-235ENST00000591935 RNF146Q9NTX7 359 aa20.44■□□□□ 0.86
CIRBP-235ENST00000591935 PHF24Q9UPV7 400 aa20.44■□□□□ 0.86
CIRBP-235ENST00000591935 ZNF213O14771 459 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 ALAS1P13196 640 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 MDM2Q00987 491 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-235ENST00000591935 SNX17Q15036 470 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 LRIT3Q3SXY7 679 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 MUM1L1Q5H9M0 696 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 LRCH3Q96II8 777 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 TRERF1Q96PN7 1200 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 ZKSCAN3Q9BRR0 538 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 TSEN34Q9BSV6 310 aaKnown RBP20.43■□□□□ 0.86
CIRBP-235ENST00000591935 IL25Q9H293 177 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 ABHD16BQ9H3Z7 469 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 GPCPD1Q9NPB8 672 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 A1CFQ9NQ94 594 aaKnown RBP20.43■□□□□ 0.86
CIRBP-235ENST00000591935 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-235ENST00000591935 ZHX1Q9UKY1 873 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-235ENST00000591935 ATP11BQ9Y2G3 1177 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 NEDD4P46934 1319 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 FRMPD2Q68DX3 1309 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-235ENST00000591935 LCTP09848 1927 aa20.43■□□□□ 0.86
CIRBP-235ENST00000591935 SOWAHBA6NEL2 793 aa20.42■□□□□ 0.86
CIRBP-235ENST00000591935 POTEB2H3BUK9 544 aa20.42■□□□□ 0.86
CIRBP-235ENST00000591935 IRX5P78411 483 aaPredicted RBP20.42■□□□□ 0.86
CIRBP-235ENST00000591935 ACVR2BQ13705 512 aa20.42■□□□□ 0.86
CIRBP-235ENST00000591935 GPR153Q6NV75 609 aa20.42■□□□□ 0.86
CIRBP-235ENST00000591935 BTNL9Q6UXG8 535 aa20.42■□□□□ 0.86
CIRBP-235ENST00000591935 FAM133AQ8N9E0 248 aa20.42■□□□□ 0.86
CIRBP-235ENST00000591935 ADCY6O43306 1168 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms