RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 JMJD4Q9H9V9 463 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 GINM1Q9NU53 330 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
VPS25-206ENST00000591584 MAN1B1Q9UKM7 699 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 MTMR7Q9Y216 660 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 PSMD14O00487 310 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 BIN1O00499 593 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 NRDCO43847 1150 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 OFD1O75665 1012 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 OR52Z1P0C646 297 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 GCFC2P16383 781 aaKnown RBP11.77□□□□□ -0.53
VPS25-206ENST00000591584 RPS12P25398 132 aaKnown RBP11.77□□□□□ -0.53
VPS25-206ENST00000591584 UBA7P41226 1012 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 TNNI2P48788 182 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 TERF1P54274 439 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 ICA1Q05084 483 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 NCAPHQ15003 741 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 INF2Q27J81 1249 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 CCDC96Q2M329 555 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 ZFPM1Q8IX07 1006 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 JDP2Q8WYK2 163 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 CUL5Q93034 780 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 DHX58Q96C10 678 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 EPSTI1Q96J88 318 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 RAB34Q9BZG1 259 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 DNAJC18Q9H819 358 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 GPCPD1Q9NPB8 672 aa11.77□□□□□ -0.53
VPS25-206ENST00000591584 ZNF70Q9UC06 446 aaPredicted RBP11.77□□□□□ -0.53
VPS25-206ENST00000591584 PPP1R2P41236 205 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 AMPD3Q01432 767 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 DPYDQ12882 1025 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 PDIA5Q14554 519 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 E2F4Q16254 413 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 CIAPIN1Q6FI81 312 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 PPP4R3AQ6IN85 833 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 BTNL9Q6UXG8 535 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 CCDC186Q7Z3E2 898 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 PDILTQ8N807 584 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 TBCKQ8TEA7 893 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 ERCC4Q92889 916 aaPredicted RBP11.76□□□□□ -0.53
VPS25-206ENST00000591584 CCDC47Q96A33 483 aaKnown RBP11.76□□□□□ -0.53
VPS25-206ENST00000591584 CSRNP1Q96S65 589 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 LRRC27Q9C0I9 530 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 SH2D4AQ9H788 454 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.76□□□□□ -0.53
VPS25-206ENST00000591584 ARHGEF10LQ9HCE6 1279 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 CD2APQ9Y5K6 639 aa11.76□□□□□ -0.53
VPS25-206ENST00000591584 FRMPD2Q68DX3 1309 aaPredicted RBP11.76□□□□□ -0.53
VPS25-206ENST00000591584 F5H6K3 240 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 CCNT1O60563 726 aaKnown RBP11.75□□□□□ -0.53
VPS25-206ENST00000591584 FOSP01100 380 aaPredicted RBP11.75□□□□□ -0.53
VPS25-206ENST00000591584 USP11P51784 963 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 EIF6P56537 245 aaKnown RBP11.75□□□□□ -0.53
VPS25-206ENST00000591584 MAP3K10Q02779 954 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 KLRC3Q07444 240 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 AP3B2Q13367 1082 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 TMEM266Q2M3C6 531 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 LETM2Q2VYF4 491 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 NOM1Q5C9Z4 860 aaKnown RBP11.75□□□□□ -0.53
VPS25-206ENST00000591584 RRAGBQ5VZM2 374 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 USP49Q70CQ1 688 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 SPC24Q8NBT2 197 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 RASGRP4Q8TDF6 673 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 TAOK3Q9H2K8 898 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 PSTPIP2Q9H939 334 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 DISC1Q9NRI5 854 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 ZNF277Q9NRM2 450 aaPredicted RBP11.75□□□□□ -0.53
VPS25-206ENST00000591584 STK24Q9Y6E0 443 aa11.75□□□□□ -0.53
VPS25-206ENST00000591584 GREB1LQ9C091 1923 aaPredicted RBP11.74□□□□□ -0.53
VPS25-206ENST00000591584 WNT7AO00755 349 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 PLA2G6O60733 806 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 RAD17O75943 681 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 BMP3P12645 472 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 STAT6P42226 847 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 CLK2P49760 499 aaKnown RBP11.74□□□□□ -0.53
VPS25-206ENST00000591584 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
VPS25-206ENST00000591584 CACNB3P54284 484 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 FANCCQ00597 558 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 TNFAIP1Q13829 316 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 KCNB1Q14721 858 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 NOLC1Q14978 699 aaKnown RBP eCLIP11.74□□□□□ -0.53
VPS25-206ENST00000591584 SEPT2Q15019 361 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 IL17AQ16552 155 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 PDXDC2PQ6P474 469 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 MOXD1Q6UVY6 613 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 CCDC150Q8NCX0 1101 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 KIAA1524Q8TCG1 905 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 CALML4Q96GE6 196 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 ZBED3Q96IU2 234 aaPredicted RBP11.74□□□□□ -0.53
VPS25-206ENST00000591584 CTAGE1Q96RT6 745 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 AMNQ9BXJ7 453 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 GOPCQ9HD26 462 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 SPTLC3Q9NUV7 552 aa11.74□□□□□ -0.53
VPS25-206ENST00000591584 BIN2Q9UBW5 565 aaPredicted RBP11.74□□□□□ -0.53
VPS25-206ENST00000591584 FOXN1O15353 648 aa11.73□□□□□ -0.53
VPS25-206ENST00000591584 SERPINC1P01008 464 aa11.73□□□□□ -0.53
VPS25-206ENST00000591584 CDK11BP21127 795 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms