RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
TUBD1-211ENST00000591548 VGLL4Q14135 290 aa13.06□□□□□ -0.32
TUBD1-211ENST00000591548 SLC39A14Q15043 492 aa13.06□□□□□ -0.32
TUBD1-211ENST00000591548 STK38Q15208 465 aa13.06□□□□□ -0.32
TUBD1-211ENST00000591548 PIK3AP1Q6ZUJ8 805 aa13.06□□□□□ -0.32
TUBD1-211ENST00000591548 ZNF280CQ8ND82 737 aa13.06□□□□□ -0.32
TUBD1-211ENST00000591548 LPAR1Q92633 364 aa13.06□□□□□ -0.32
TUBD1-211ENST00000591548 C6orf50Q9HD87 102 aa13.06□□□□□ -0.32
TUBD1-211ENST00000591548 PCDHB6Q9Y5E3 794 aa13.06□□□□□ -0.32
TUBD1-211ENST00000591548 SNCAIPQ9Y6H5 919 aa13.06□□□□□ -0.32
TUBD1-211ENST00000591548 PHIPQ8WWQ0 1821 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 WNT7AO00755 349 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 WDR46O15213 610 aaKnown RBP13.05□□□□□ -0.32
TUBD1-211ENST00000591548 SPTLC2O15270 562 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 GNA11P29992 359 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 BACE1P56817 501 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 PPP1R18Q6NYC8 613 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 CHURC1Q8WUH1 139 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 GZF1Q9H116 711 aaPredicted RBP13.05□□□□□ -0.32
TUBD1-211ENST00000591548 RRAGCQ9HB90 399 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 AS3MTQ9HBK9 375 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 FBXO28Q9NVF7 368 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 FEM1BQ9UK73 627 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 PCDHA7Q9UN72 937 aa13.05□□□□□ -0.32
TUBD1-211ENST00000591548 TRIM75PA6NK02 468 aa13.04□□□□□ -0.32
TUBD1-211ENST00000591548 ATP2B1P20020 1258 aa13.04□□□□□ -0.32
TUBD1-211ENST00000591548 USP14P54578 494 aa13.04□□□□□ -0.32
TUBD1-211ENST00000591548 CAVIN1Q6NZI2 390 aaKnown RBP13.04□□□□□ -0.32
TUBD1-211ENST00000591548 MOB2Q70IA6 237 aa13.04□□□□□ -0.32
TUBD1-211ENST00000591548 FAM160B2Q86V87 743 aa13.04□□□□□ -0.32
TUBD1-211ENST00000591548 KCNG4Q8TDN1 519 aa13.04□□□□□ -0.32
TUBD1-211ENST00000591548 KIFC2Q96AC6 838 aa13.04□□□□□ -0.32
TUBD1-211ENST00000591548 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
TUBD1-211ENST00000591548 AFG3L2Q9Y4W6 797 aa13.04□□□□□ -0.32
TUBD1-211ENST00000591548 PCDHA1Q9Y5I3 950 aa13.04□□□□□ -0.32
TUBD1-211ENST00000591548 OTOFQ9HC10 1997 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 GOLGA6L4A6NEF3 574 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 VCAM1P19320 739 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 NF2P35240 595 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 ME1P48163 572 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 IREB2P48200 963 aaKnown RBP13.03□□□□□ -0.32
TUBD1-211ENST00000591548 ADCY7P51828 1080 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 MAP1SQ66K74 1059 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-211ENST00000591548 FBXO11Q86XK2 927 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 AMNQ9BXJ7 453 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 RANBP17Q9H2T7 1088 aaKnown RBP13.03□□□□□ -0.32
TUBD1-211ENST00000591548 RIC8AQ9NPQ8 531 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.03□□□□□ -0.32
TUBD1-211ENST00000591548 TMEM63CQ9P1W3 806 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 BIN2Q9UBW5 565 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-211ENST00000591548 CCDC194A0A1B0GVG4 234 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 C19orf81C9J6K1 198 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 PPP6R2O75170 966 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 TAL1P17542 331 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-211ENST00000591548 LIG1P18858 919 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 MARCKSP29966 332 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-211ENST00000591548 TRAPPC10P48553 1259 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 HMGCS2P54868 508 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 MAP3K11Q16584 847 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 AXDND1Q5T1B0 1012 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-211ENST00000591548 ADALQ6DHV7 355 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 REXO1Q8N1G1 1221 aaKnown RBP13.03□□□□□ -0.32
TUBD1-211ENST00000591548 BICD2Q8TD16 824 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 C12orf42Q96LP6 360 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 TMEM260Q9NX78 707 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 NOL7Q9UMY1 257 aaKnown RBP13.03□□□□□ -0.32
TUBD1-211ENST00000591548 CSADQ9Y600 493 aa13.03□□□□□ -0.32
TUBD1-211ENST00000591548 TRAF5O00463 557 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 CLK2P49760 499 aaKnown RBP13.02□□□□□ -0.33
TUBD1-211ENST00000591548 FMR1Q06787 632 aaKnown RBP eCLIP13.02□□□□□ -0.33
TUBD1-211ENST00000591548 INF2Q27J81 1249 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 USH1GQ495M9 461 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 TTC38Q5R3I4 469 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 JAKMIP3Q5VZ66 844 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 KRT25Q7Z3Z0 450 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 ANKRD13AQ8IZ07 590 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 PRPF38AQ8NAV1 312 aaKnown RBP13.02□□□□□ -0.33
TUBD1-211ENST00000591548 CUL5Q93034 780 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 CLMNQ96JQ2 1002 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 RPAP3Q9H6T3 665 aaPredicted RBP13.02□□□□□ -0.33
TUBD1-211ENST00000591548 PSTPIP2Q9H939 334 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.02□□□□□ -0.33
TUBD1-211ENST00000591548 MRVI1Q9Y6F6 885 aa13.02□□□□□ -0.33
TUBD1-211ENST00000591548 OPLAHO14841 1288 aa13.01□□□□□ -0.33
TUBD1-211ENST00000591548 MRPL12P52815 198 aaKnown RBP13.01□□□□□ -0.33
TUBD1-211ENST00000591548 TTLL12Q14166 644 aaPredicted RBP13.01□□□□□ -0.33
TUBD1-211ENST00000591548 ZNF174Q15697 407 aa13.01□□□□□ -0.33
TUBD1-211ENST00000591548 UBE2SQ16763 222 aa13.01□□□□□ -0.33
TUBD1-211ENST00000591548 CCDC174Q6PII3 467 aa13.01□□□□□ -0.33
TUBD1-211ENST00000591548 GOLPH3LQ9H4A5 285 aa13.01□□□□□ -0.33
TUBD1-211ENST00000591548 ELP3Q9H9T3 547 aa13.01□□□□□ -0.33
TUBD1-211ENST00000591548 ZNF536O15090 1300 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 A0A1W2PQ27 194 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 A0A1W2PQ64 194 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 A0A1W2PQD8 194 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 USP17L15C9J2P7 530 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 USP17L13C9JLJ4 530 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms