RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 KANK3Q6NY19 840 aa11.36□□□□□ -0.59
PTPN2-210ENST00000591115 MIGA2Q7L4E1 593 aa11.36□□□□□ -0.59
PTPN2-210ENST00000591115 LDHDQ86WU2 507 aa11.36□□□□□ -0.59
PTPN2-210ENST00000591115 CEP57L1Q8IYX8 460 aa11.36□□□□□ -0.59
PTPN2-210ENST00000591115 CLIC6Q96NY7 704 aa11.36□□□□□ -0.59
PTPN2-210ENST00000591115 BPIFA3Q9BQP9 254 aa11.36□□□□□ -0.59
PTPN2-210ENST00000591115 DNAJC25Q9H1X3 360 aa11.36□□□□□ -0.59
PTPN2-210ENST00000591115 SEC63Q9UGP8 760 aaKnown RBP11.36□□□□□ -0.59
PTPN2-210ENST00000591115 FZD1Q9UP38 647 aa11.36□□□□□ -0.59
PTPN2-210ENST00000591115 TRAF5O00463 557 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 ATP2C1P98194 919 aaPredicted RBP11.35□□□□□ -0.59
PTPN2-210ENST00000591115 FMR1Q06787 632 aaKnown RBP eCLIP11.35□□□□□ -0.59
PTPN2-210ENST00000591115 EARS2Q5JPH6 523 aaKnown RBP11.35□□□□□ -0.59
PTPN2-210ENST00000591115 GPATCH4Q5T3I0 446 aaKnown RBP11.35□□□□□ -0.59
PTPN2-210ENST00000591115 WWC2Q6AWC2 1192 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 TATDN1Q6P1N9 297 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 USP17L2Q6R6M4 530 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 KRBA2Q6ZNG9 492 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 ZSCAN30Q86W11 494 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 MKL1Q969V6 931 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 CDCA5Q96FF9 252 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 CCDC34Q96HJ3 373 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 TRIM34Q9BYJ4 488 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 ZMYND12Q9H0C1 365 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 TUBE1Q9UJT0 475 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 PPP2R3BQ9Y5P8 575 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 PHIPQ8WWQ0 1821 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 FAM205CA6NFA0 338 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 YY1P25490 414 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 GNA11P29992 359 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 NLRP12P59046 1061 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 ZNF543Q08ER8 600 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 IQCB1Q15051 598 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 ARL6IP4Q66PJ3 421 aaKnown RBP11.35□□□□□ -0.59
PTPN2-210ENST00000591115 PIK3AP1Q6ZUJ8 805 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 HEATR3Q7Z4Q2 680 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 LUZP1Q86V48 1076 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 GPKOWQ92917 476 aaPredicted RBP eCLIP11.35□□□□□ -0.59
PTPN2-210ENST00000591115 PYM1Q9BRP8 204 aaKnown RBP11.35□□□□□ -0.59
PTPN2-210ENST00000591115 KANSL2Q9H9L4 492 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 C6orf50Q9HD87 102 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 NYAP2Q9P242 653 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 CLIP2Q9UDT6 1046 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 SYNPO2Q9UMS6 1093 aa11.35□□□□□ -0.59
PTPN2-210ENST00000591115 CCDC194A0A1B0GVG4 234 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 USP17L5A8MUK1 530 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 GOLGA6L19H0YKK7 550 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 KIF3CO14782 793 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 GDF11O95390 407 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 GOLGA8HP0CJ92 632 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 ATP2B1P20020 1258 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 RRP1BQ14684 758 aaKnown RBP11.34□□□□□ -0.59
PTPN2-210ENST00000591115 CERKLQ49MI3 558 aaPredicted RBP11.34□□□□□ -0.59
PTPN2-210ENST00000591115 TYW1BQ6NUM6 668 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 PPP1R18Q6NYC8 613 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 SARM1Q6SZW1 724 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 TMEM179Q6ZVK1 233 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 KRT25Q7Z3Z0 450 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 CNNM3Q8NE01 707 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 PIBF1Q8WXW3 757 aa11.34□□□□□ -0.59
PTPN2-210ENST00000591115 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPN2-210ENST00000591115 HERC5Q9UII4 1024 aaKnown RBP11.34□□□□□ -0.59
PTPN2-210ENST00000591115 LAD1O00515 517 aa11.33□□□□□ -0.6
PTPN2-210ENST00000591115 TPM3P06753 285 aa11.33□□□□□ -0.6
PTPN2-210ENST00000591115 NAPAP54920 295 aa11.33□□□□□ -0.6
PTPN2-210ENST00000591115 PTGDRQ13258 359 aa11.33□□□□□ -0.6
PTPN2-210ENST00000591115 ORC2Q13416 577 aaPredicted RBP11.33□□□□□ -0.6
PTPN2-210ENST00000591115 PRKG1Q13976 671 aa11.33□□□□□ -0.6
PTPN2-210ENST00000591115 LONRF3Q496Y0 759 aa11.33□□□□□ -0.6
PTPN2-210ENST00000591115 C11orf57Q6ZUT1 292 aaPredicted RBP11.33□□□□□ -0.6
PTPN2-210ENST00000591115 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.33□□□□□ -0.6
PTPN2-210ENST00000591115 CLEC10AQ8IUN9 316 aa11.33□□□□□ -0.6
PTPN2-210ENST00000591115 LRRC47Q8N1G4 583 aaKnown RBP11.33□□□□□ -0.6
PTPN2-210ENST00000591115 CSRNP2Q9H175 543 aa11.33□□□□□ -0.6
PTPN2-210ENST00000591115 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.33□□□□□ -0.6
PTPN2-210ENST00000591115 PCDHA6Q9UN73 950 aa11.33□□□□□ -0.6
PTPN2-210ENST00000591115 MTMR7Q9Y216 660 aa11.33□□□□□ -0.6
PTPN2-210ENST00000591115 PCDHA8Q9Y5H6 950 aa11.33□□□□□ -0.6
PTPN2-210ENST00000591115 BECN2A8MW95 431 aa11.32□□□□□ -0.6
PTPN2-210ENST00000591115 MPHOSPH10O00566 681 aaKnown RBP11.32□□□□□ -0.6
PTPN2-210ENST00000591115 PTMAP06454 111 aaKnown RBP11.32□□□□□ -0.6
PTPN2-210ENST00000591115 JAG1P78504 1218 aa11.32□□□□□ -0.6
PTPN2-210ENST00000591115 MDM2Q00987 491 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-210ENST00000591115 GRIN1Q05586 938 aa11.32□□□□□ -0.6
PTPN2-210ENST00000591115 ZNF174Q15697 407 aa11.32□□□□□ -0.6
PTPN2-210ENST00000591115 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
PTPN2-210ENST00000591115 ZNF784Q8NCA9 323 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-210ENST00000591115 DCAF4Q8WV16 495 aa11.32□□□□□ -0.6
PTPN2-210ENST00000591115 PIGSQ96S52 555 aa11.32□□□□□ -0.6
PTPN2-210ENST00000591115 ZNF408Q9H9D4 720 aa11.32□□□□□ -0.6
PTPN2-210ENST00000591115 PTPRFP10586 1907 aa11.32□□□□□ -0.6
PTPN2-210ENST00000591115 BAZ2BQ9UIF8 2168 aaKnown RBP11.31□□□□□ -0.6
PTPN2-210ENST00000591115 PNMA6FA0A0J9YX94 578 aa11.31□□□□□ -0.6
PTPN2-210ENST00000591115 SMCO2A6NFE2 343 aa11.31□□□□□ -0.6
PTPN2-210ENST00000591115 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
PTPN2-210ENST00000591115 POLR2DO15514 142 aaKnown RBP11.31□□□□□ -0.6
PTPN2-210ENST00000591115 AP5Z1O43299 807 aa11.31□□□□□ -0.6
PTPN2-210ENST00000591115 CLCN1P35523 988 aa11.31□□□□□ -0.6
PTPN2-210ENST00000591115 LONP1P36776 959 aaKnown RBP11.31□□□□□ -0.6
PTPN2-210ENST00000591115 PRPHP41219 470 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms