RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 GAS2L1Q99501 681 aaPredicted RBP13.01□□□□□ -0.33
GFAP-217ENST00000590922 INCENPQ9NQS7 918 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 STARD7Q9NQZ5 370 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 ADAMTS5Q9UNA0 930 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 CNPY2Q9Y2B0 182 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 MOXD2PA6NHM9 499 aa13□□□□□ -0.33
GFAP-217ENST00000590922 HIP1O00291 1037 aa13□□□□□ -0.33
GFAP-217ENST00000590922 ADAMTS4O75173 837 aa13□□□□□ -0.33
GFAP-217ENST00000590922 EEF2P13639 858 aaKnown RBP13□□□□□ -0.33
GFAP-217ENST00000590922 COPB2P35606 906 aa13□□□□□ -0.33
GFAP-217ENST00000590922 CCDC174Q6PII3 467 aa13□□□□□ -0.33
GFAP-217ENST00000590922 ZNF444Q8N0Y2 327 aaPredicted RBP13□□□□□ -0.33
GFAP-217ENST00000590922 ATXN2LQ8WWM7 1075 aaKnown RBP13□□□□□ -0.33
GFAP-217ENST00000590922 LENG1Q96BZ8 264 aaPredicted RBP13□□□□□ -0.33
GFAP-217ENST00000590922 CCDC136Q96JN2 1154 aa13□□□□□ -0.33
GFAP-217ENST00000590922 BUD13Q9BRD0 619 aaKnown RBP eCLIP13□□□□□ -0.33
GFAP-217ENST00000590922 IL25Q9H293 177 aa13□□□□□ -0.33
GFAP-217ENST00000590922 KANSL2Q9H9L4 492 aa13□□□□□ -0.33
GFAP-217ENST00000590922 MROH7Q68CQ1 1323 aa12.99□□□□□ -0.33
GFAP-217ENST00000590922 SYNRGQ9UMZ2 1314 aa12.99□□□□□ -0.33
GFAP-217ENST00000590922 VWA5AO00534 786 aa12.99□□□□□ -0.33
GFAP-217ENST00000590922 CENPBP07199 599 aaPredicted RBP12.99□□□□□ -0.33
GFAP-217ENST00000590922 SLC3A2P08195 630 aaKnown RBP12.99□□□□□ -0.33
GFAP-217ENST00000590922 STAT3P40763 770 aa12.99□□□□□ -0.33
GFAP-217ENST00000590922 PDE4BQ07343 736 aa12.99□□□□□ -0.33
GFAP-217ENST00000590922 PPIGQ13427 754 aaKnown RBP eCLIP12.99□□□□□ -0.33
GFAP-217ENST00000590922 AKNAD1Q5T1N1 836 aa12.99□□□□□ -0.33
GFAP-217ENST00000590922 MFSD5Q6N075 450 aa12.99□□□□□ -0.33
GFAP-217ENST00000590922 MSL3Q8N5Y2 521 aaKnown RBP12.99□□□□□ -0.33
GFAP-217ENST00000590922 ZNF287Q9HBT7 754 aa12.99□□□□□ -0.33
GFAP-217ENST00000590922 TBX21Q9UL17 535 aa12.99□□□□□ -0.33
GFAP-217ENST00000590922 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.99□□□□□ -0.33
GFAP-217ENST00000590922 GREB1LQ9C091 1923 aaPredicted RBP12.98□□□□□ -0.33
GFAP-217ENST00000590922 SYNGAP1Q96PV0 1343 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 MFAP1P55081 439 aaKnown RBP12.98□□□□□ -0.33
GFAP-217ENST00000590922 HAND2P61296 217 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 KCNA10Q16322 511 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 KLHDC9Q8NEP7 349 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 PPM1EQ8WY54 764 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 ASB2Q96Q27 587 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 PBX4Q9BYU1 374 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 FBXO28Q9NVF7 368 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 THEGQ9P2T0 379 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 ANAPC4Q9UJX5 808 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 ZNF214Q9UL59 606 aaPredicted RBP12.98□□□□□ -0.33
GFAP-217ENST00000590922 FAM184BQ9ULE4 1060 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 PPP1R9AQ9ULJ8 1098 aa12.98□□□□□ -0.33
GFAP-217ENST00000590922 CHD9Q3L8U1 2897 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 ELP1O95163 1332 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 IGKV6D-41A0A0C4DH26 115 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 TSPY3P0CV98 308 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 TSPY8P0CW00 308 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 CHMLP26374 656 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 PBX2P40425 430 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 TFAP4Q01664 338 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 TMEM240Q5SV17 173 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 RASIP1Q5U651 963 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 CCSAPQ6IQ19 270 aaPredicted RBP12.97□□□□□ -0.33
GFAP-217ENST00000590922 C16orf59Q7L2K0 433 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 GLT1D1Q96MS3 346 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 PRDM12Q9H4Q4 367 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 GOPCQ9HD26 462 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 CLIP2Q9UDT6 1046 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 BDP1A6H8Y1 2624 aa12.97□□□□□ -0.33
GFAP-217ENST00000590922 ZMYM6O95789 1325 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 GRXCR1A8MXD5 290 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 RAD21O60216 631 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 RANBP6O60518 1105 aaKnown RBP12.96□□□□□ -0.33
GFAP-217ENST00000590922 DUSP11O75319 330 aaKnown RBP12.96□□□□□ -0.33
GFAP-217ENST00000590922 SNAI1O95863 264 aaPredicted RBP12.96□□□□□ -0.33
GFAP-217ENST00000590922 CSF2RAP15509 400 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 CST5P28325 142 aaPredicted RBP12.96□□□□□ -0.33
GFAP-217ENST00000590922 CDK7P50613 346 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 MRPS5P82675 430 aaKnown RBP12.96□□□□□ -0.33
GFAP-217ENST00000590922 MAMDC4Q6UXC1 1216 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 TMEM199Q8N511 208 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 PCSK9Q8NBP7 692 aaKnown RBP12.96□□□□□ -0.33
GFAP-217ENST00000590922 REPS2Q8NFH8 660 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 ADAMTS19Q8TE59 1207 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 CEP95Q96GE4 821 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 MTMR4Q9NYA4 1195 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 NYAP2Q9P242 653 aa12.96□□□□□ -0.33
GFAP-217ENST00000590922 ZHX1Q9UKY1 873 aaPredicted RBP12.96□□□□□ -0.33
GFAP-217ENST00000590922 MCM3APO60318 1980 aa12.96□□□□□ -0.34
GFAP-217ENST00000590922 MYADML2A6NDP7 307 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 ORC4O43929 436 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 NMT2O60551 498 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 ASGR1P07306 291 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 FGRP09769 529 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 C6orf222P0C671 652 aaPredicted RBP12.95□□□□□ -0.34
GFAP-217ENST00000590922 RAB30Q15771 203 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 RRP12Q5JTH9 1297 aaKnown RBP12.95□□□□□ -0.34
GFAP-217ENST00000590922 FAM83BQ5T0W9 1011 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 PSRC1Q6PGN9 363 aaPredicted RBP12.95□□□□□ -0.34
GFAP-217ENST00000590922 ZNF365Q70YC5 407 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 TBC1D10CQ8IV04 446 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms