RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 RAB30Q15771 203 aa17.58■□□□□ 0.4
ERCC1-211ENST00000590701 CTR9Q6PD62 1173 aa17.58■□□□□ 0.4
ERCC1-211ENST00000590701 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
ERCC1-211ENST00000590701 IL27Q8NEV9 243 aa17.58■□□□□ 0.4
ERCC1-211ENST00000590701 BOLA2Q9H3K6 86 aa17.58■□□□□ 0.4
ERCC1-211ENST00000590701 ABHD16BQ9H3Z7 469 aa17.58■□□□□ 0.4
ERCC1-211ENST00000590701 SPC25Q9HBM1 224 aa17.58■□□□□ 0.4
ERCC1-211ENST00000590701 CHD7Q9P2D1 2997 aa17.57■□□□□ 0.4
ERCC1-211ENST00000590701 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.57■□□□□ 0.4
ERCC1-211ENST00000590701 F5H6K3 240 aa17.57■□□□□ 0.4
ERCC1-211ENST00000590701 RFXAPO00287 272 aa17.57■□□□□ 0.4
ERCC1-211ENST00000590701 KLRC3Q07444 240 aa17.57■□□□□ 0.4
ERCC1-211ENST00000590701 CXCL17Q6UXB2 119 aa17.57■□□□□ 0.4
ERCC1-211ENST00000590701 ARMCX2Q7L311 632 aa17.57■□□□□ 0.4
ERCC1-211ENST00000590701 ZNF467Q7Z7K2 595 aaPredicted RBP17.57■□□□□ 0.4
ERCC1-211ENST00000590701 ANKRD35Q8N283 1001 aa17.57■□□□□ 0.4
ERCC1-211ENST00000590701 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.57■□□□□ 0.4
ERCC1-211ENST00000590701 SLC4A4Q9Y6R1 1079 aa17.57■□□□□ 0.4
ERCC1-211ENST00000590701 ASTN1O14525 1302 aa17.56■□□□□ 0.4
ERCC1-211ENST00000590701 ZBED4O75132 1171 aa17.56■□□□□ 0.4
ERCC1-211ENST00000590701 KCNQ1P51787 676 aa17.56■□□□□ 0.4
ERCC1-211ENST00000590701 CNTN2Q02246 1040 aa17.56■□□□□ 0.4
ERCC1-211ENST00000590701 CCDC144CPQ8IYA2 1237 aa17.56■□□□□ 0.4
ERCC1-211ENST00000590701 PRPF38AQ8NAV1 312 aaKnown RBP17.56■□□□□ 0.4
ERCC1-211ENST00000590701 KIFC2Q96AC6 838 aa17.56■□□□□ 0.4
ERCC1-211ENST00000590701 KATNBL1Q9H079 304 aa17.56■□□□□ 0.4
ERCC1-211ENST00000590701 TRPV6Q9H1D0 765 aa17.56■□□□□ 0.4
ERCC1-211ENST00000590701 PAG1Q9NWQ8 432 aa17.56■□□□□ 0.4
ERCC1-211ENST00000590701 GRIN2DO15399 1336 aa17.55■□□□□ 0.4
ERCC1-211ENST00000590701 NDUFB10O96000 172 aa17.55■□□□□ 0.4
ERCC1-211ENST00000590701 IFIT2P09913 472 aaKnown RBP17.55■□□□□ 0.4
ERCC1-211ENST00000590701 NOL8Q76FK4 1167 aaKnown RBP17.55■□□□□ 0.4
ERCC1-211ENST00000590701 AMOTL1Q8IY63 956 aa17.55■□□□□ 0.4
ERCC1-211ENST00000590701 CLASRPQ8N2M8 674 aaKnown RBP17.55■□□□□ 0.4
ERCC1-211ENST00000590701 HIPK3Q9H422 1215 aa17.55■□□□□ 0.4
ERCC1-211ENST00000590701 CLIP2Q9UDT6 1046 aa17.55■□□□□ 0.4
ERCC1-211ENST00000590701 DDX49Q9Y6V7 483 aaKnown RBP17.55■□□□□ 0.4
ERCC1-211ENST00000590701 PRRC2BQ5JSZ5 2229 aaKnown RBP17.54■□□□□ 0.4
ERCC1-211ENST00000590701 TNFAIP2Q03169 654 aa17.54■□□□□ 0.4
ERCC1-211ENST00000590701 TMEM63BQ5T3F8 832 aa17.54■□□□□ 0.4
ERCC1-211ENST00000590701 SLC43A3Q8NBI5 491 aa17.54■□□□□ 0.4
ERCC1-211ENST00000590701 VWCEQ96DN2 955 aa17.54■□□□□ 0.4
ERCC1-211ENST00000590701 PUS7LQ9H0K6 701 aaKnown RBP17.54■□□□□ 0.4
ERCC1-211ENST00000590701 TSPYL2Q9H2G4 693 aaPredicted RBP17.54■□□□□ 0.4
ERCC1-211ENST00000590701 EPHX3Q9H6B9 360 aa17.54■□□□□ 0.4
ERCC1-211ENST00000590701 CTDP1Q9Y5B0 961 aaPredicted RBP17.54■□□□□ 0.4
ERCC1-211ENST00000590701 MYH4Q9Y623 1939 aa17.54■□□□□ 0.4
ERCC1-211ENST00000590701 GREB1LQ9C091 1923 aaPredicted RBP17.53■□□□□ 0.4
ERCC1-211ENST00000590701 ATP2A1O14983 1001 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 RASA1P20936 1047 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 PSMC6P62333 389 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 ITGA7Q13683 1181 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 SKIV2LQ15477 1246 aaKnown RBP17.53■□□□□ 0.4
ERCC1-211ENST00000590701 PPP2R2DQ66LE6 453 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 SCLYQ96I15 445 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 NOC4LQ9BVI4 516 aaKnown RBP17.53■□□□□ 0.4
ERCC1-211ENST00000590701 WNT8AQ9H1J5 351 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 MTIF3Q9H2K0 278 aaKnown RBP17.53■□□□□ 0.4
ERCC1-211ENST00000590701 CERS4Q9HA82 394 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 SLC38A10Q9HBR0 1119 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 HOMER2Q9NSB8 354 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 NYAP2Q9P242 653 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 SLC4A7Q9Y6M7 1214 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 XIRP2A4UGR9 3374 aa17.53■□□□□ 0.4
ERCC1-211ENST00000590701 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
ERCC1-211ENST00000590701 DYNC1LI2O43237 492 aaPredicted RBP17.52■□□□□ 0.4
ERCC1-211ENST00000590701 NKX3-2P78367 333 aa17.52■□□□□ 0.4
ERCC1-211ENST00000590701 HSP90AB4PQ58FF6 505 aa17.52■□□□□ 0.4
ERCC1-211ENST00000590701 PANK1Q8TE04 598 aa17.52■□□□□ 0.4
ERCC1-211ENST00000590701 CHMP4CQ96CF2 233 aa17.52■□□□□ 0.4
ERCC1-211ENST00000590701 DDRGK1Q96HY6 314 aa17.52■□□□□ 0.4
ERCC1-211ENST00000590701 C1QTNF1Q9BXJ1 281 aa17.52■□□□□ 0.4
ERCC1-211ENST00000590701 MKNK2Q9HBH9 465 aa17.52■□□□□ 0.4
ERCC1-211ENST00000590701 MYH7P12883 1935 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 SOWAHBA6NEL2 793 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 ZBBXA8MT70 800 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 MINDY4BA8MYZ0 360 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 B4GALT4O60513 344 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 SCN5AQ14524 2016 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 UBE3CQ15386 1083 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 KRT40Q6A162 431 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 CHST13Q8NET6 341 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 KIF1BPQ96EK5 621 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 LRFN3Q9BTN0 628 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 PDGFCQ9NRA1 345 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 GNEQ9Y223 722 aaKnown RBP17.51■□□□□ 0.39
ERCC1-211ENST00000590701 PCDHA11Q9Y5I1 949 aa17.51■□□□□ 0.39
ERCC1-211ENST00000590701 SMPD1P17405 629 aa17.5■□□□□ 0.39
ERCC1-211ENST00000590701 ATP5JP18859 108 aa17.5■□□□□ 0.39
ERCC1-211ENST00000590701 HOXD11P31277 338 aaPredicted RBP17.5■□□□□ 0.39
ERCC1-211ENST00000590701 FSCN1Q16658 493 aaKnown RBP17.5■□□□□ 0.39
ERCC1-211ENST00000590701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.5■□□□□ 0.39
ERCC1-211ENST00000590701 RPUSD2Q8IZ73 545 aaKnown RBP17.5■□□□□ 0.39
ERCC1-211ENST00000590701 FAM133AQ8N9E0 248 aa17.5■□□□□ 0.39
ERCC1-211ENST00000590701 AGBL1Q96MI9 1066 aa17.5■□□□□ 0.39
ERCC1-211ENST00000590701 HAUS7Q99871 368 aa17.5■□□□□ 0.39
ERCC1-211ENST00000590701 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.5■□□□□ 0.39
ERCC1-211ENST00000590701 MTCH2Q9Y6C9 303 aa17.5■□□□□ 0.39
ERCC1-211ENST00000590701 PRDM1O75626 825 aa17.49■□□□□ 0.39
ERCC1-211ENST00000590701 TTLL4Q14679 1199 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms