RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 TMEM240Q5SV17 173 aa16.91■□□□□ 0.3
SAFB2-205ENST00000590000 KBTBD3Q8NAB2 608 aa16.91■□□□□ 0.3
SAFB2-205ENST00000590000 MKL1Q969V6 931 aa16.91■□□□□ 0.3
SAFB2-205ENST00000590000 CHMP4CQ96CF2 233 aa16.91■□□□□ 0.3
SAFB2-205ENST00000590000 FAM184BQ9ULE4 1060 aa16.91■□□□□ 0.3
SAFB2-205ENST00000590000 UMODL1Q5DID0 1318 aa16.91■□□□□ 0.3
SAFB2-205ENST00000590000 SOWAHBA6NEL2 793 aa16.9■□□□□ 0.3
SAFB2-205ENST00000590000 GPAA1O43292 621 aa16.9■□□□□ 0.3
SAFB2-205ENST00000590000 DUSP11O75319 330 aaKnown RBP16.9■□□□□ 0.3
SAFB2-205ENST00000590000 ACRP10323 421 aa16.9■□□□□ 0.3
SAFB2-205ENST00000590000 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
SAFB2-205ENST00000590000 FAM126BQ8IXS8 530 aa16.9■□□□□ 0.3
SAFB2-205ENST00000590000 MSL3Q8N5Y2 521 aaKnown RBP16.9■□□□□ 0.3
SAFB2-205ENST00000590000 PRPF38AQ8NAV1 312 aaKnown RBP16.9■□□□□ 0.3
SAFB2-205ENST00000590000 OTUD7AQ8TE49 926 aaPredicted RBP16.9■□□□□ 0.3
SAFB2-205ENST00000590000 APPBP2Q92624 585 aa16.9■□□□□ 0.3
SAFB2-205ENST00000590000 KIFC2Q96AC6 838 aa16.9■□□□□ 0.3
SAFB2-205ENST00000590000 INCENPQ9NQS7 918 aa16.9■□□□□ 0.3
SAFB2-205ENST00000590000 ECHDC1Q9NTX5 307 aa16.9■□□□□ 0.3
SAFB2-205ENST00000590000 MTMR4Q9NYA4 1195 aa16.9■□□□□ 0.3
SAFB2-205ENST00000590000 CNPY2Q9Y2B0 182 aa16.9■□□□□ 0.3
SAFB2-205ENST00000590000 GRIN2DO15399 1336 aa16.9■□□□□ 0.3
SAFB2-205ENST00000590000 MOXD2PA6NHM9 499 aa16.89■□□□□ 0.29
SAFB2-205ENST00000590000 CSF2RAP15509 400 aa16.89■□□□□ 0.29
SAFB2-205ENST00000590000 GJA9P57773 515 aa16.89■□□□□ 0.29
SAFB2-205ENST00000590000 BEX3Q00994 111 aa16.89■□□□□ 0.29
SAFB2-205ENST00000590000 MFSD5Q6N075 450 aa16.89■□□□□ 0.29
SAFB2-205ENST00000590000 ARMCX2Q7L311 632 aa16.89■□□□□ 0.29
SAFB2-205ENST00000590000 ZNF467Q7Z7K2 595 aaPredicted RBP16.89■□□□□ 0.29
SAFB2-205ENST00000590000 CCDC144CPQ8IYA2 1237 aa16.89■□□□□ 0.29
SAFB2-205ENST00000590000 FAM133AQ8N9E0 248 aa16.89■□□□□ 0.29
SAFB2-205ENST00000590000 DDX11Q96FC9 970 aa16.89■□□□□ 0.29
SAFB2-205ENST00000590000 PURBQ96QR8 312 aaKnown RBP16.89■□□□□ 0.29
SAFB2-205ENST00000590000 PBX4Q9BYU1 374 aa16.89■□□□□ 0.29
SAFB2-205ENST00000590000 RNF113AO15541 343 aaKnown RBP16.88■□□□□ 0.29
SAFB2-205ENST00000590000 C6orf222P0C671 652 aaPredicted RBP16.88■□□□□ 0.29
SAFB2-205ENST00000590000 COPB2P35606 906 aa16.88■□□□□ 0.29
SAFB2-205ENST00000590000 SNAP25P60880 206 aa16.88■□□□□ 0.29
SAFB2-205ENST00000590000 NKX3-2P78367 333 aa16.88■□□□□ 0.29
SAFB2-205ENST00000590000 ADGRE1Q14246 886 aa16.88■□□□□ 0.29
SAFB2-205ENST00000590000 GIMAP6Q6P9H5 292 aa16.88■□□□□ 0.29
SAFB2-205ENST00000590000 AMOTL1Q8IY63 956 aa16.88■□□□□ 0.29
SAFB2-205ENST00000590000 PPP1R12CQ9BZL4 782 aa16.88■□□□□ 0.29
SAFB2-205ENST00000590000 ZNF576Q9H609 170 aa16.88■□□□□ 0.29
SAFB2-205ENST00000590000 MKNK2Q9HBH9 465 aa16.88■□□□□ 0.29
SAFB2-205ENST00000590000 CXXC1Q9P0U4 656 aaPredicted RBP16.88■□□□□ 0.29
SAFB2-205ENST00000590000 PLIN4Q96Q06 1357 aa16.88■□□□□ 0.29
SAFB2-205ENST00000590000 NCOR1O75376 2440 aa16.87■□□□□ 0.29
SAFB2-205ENST00000590000 TMEM265A0A087WTH1 108 aa16.87■□□□□ 0.29
SAFB2-205ENST00000590000 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.87■□□□□ 0.29
SAFB2-205ENST00000590000 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.87■□□□□ 0.29
SAFB2-205ENST00000590000 DCDC2CA8MYV0 355 aa16.87■□□□□ 0.29
SAFB2-205ENST00000590000 CD4P01730 458 aa16.87■□□□□ 0.29
SAFB2-205ENST00000590000 ANKRD45Q5TZF3 282 aa16.87■□□□□ 0.29
SAFB2-205ENST00000590000 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
SAFB2-205ENST00000590000 AGBL1Q96MI9 1066 aa16.87■□□□□ 0.29
SAFB2-205ENST00000590000 A1CFQ9NQ94 594 aaKnown RBP16.87■□□□□ 0.29
SAFB2-205ENST00000590000 PDGFCQ9NRA1 345 aa16.87■□□□□ 0.29
SAFB2-205ENST00000590000 HOMER2Q9NSB8 354 aa16.87■□□□□ 0.29
SAFB2-205ENST00000590000 ELP1O95163 1332 aa16.87■□□□□ 0.29
SAFB2-205ENST00000590000 ARVCFO00192 962 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 CYP2C18P33260 490 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 MUM1L1Q5H9M0 696 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 SLFN13Q68D06 897 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 ZSCAN25Q6NSZ9 544 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 ZNF365Q70YC5 407 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 SLC43A3Q8NBI5 491 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 GMCL1P1Q8NEA9 526 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 NEDD1Q8NHV4 660 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 NUP133Q8WUM0 1156 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 TIFAQ96CG3 184 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 DDRGK1Q96HY6 314 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 ABHD16BQ9H3Z7 469 aa16.86■□□□□ 0.29
SAFB2-205ENST00000590000 GNEQ9Y223 722 aaKnown RBP16.86■□□□□ 0.29
SAFB2-205ENST00000590000 BDP1A6H8Y1 2624 aa16.85■□□□□ 0.29
SAFB2-205ENST00000590000 NMT2O60551 498 aa16.85■□□□□ 0.29
SAFB2-205ENST00000590000 ZBED4O75132 1171 aa16.85■□□□□ 0.29
SAFB2-205ENST00000590000 IGHDP01880 384 aa16.85■□□□□ 0.29
SAFB2-205ENST00000590000 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
SAFB2-205ENST00000590000 CXCL17Q6UXB2 119 aa16.85■□□□□ 0.29
SAFB2-205ENST00000590000 ANKRD35Q8N283 1001 aa16.85■□□□□ 0.29
SAFB2-205ENST00000590000 PI4K2BQ8TCG2 481 aa16.85■□□□□ 0.29
SAFB2-205ENST00000590000 GLT1D1Q96MS3 346 aa16.85■□□□□ 0.29
SAFB2-205ENST00000590000 PRDM12Q9H4Q4 367 aa16.85■□□□□ 0.29
SAFB2-205ENST00000590000 IL17RBQ9NRM6 502 aa16.85■□□□□ 0.29
SAFB2-205ENST00000590000 FEM1BQ9UK73 627 aa16.85■□□□□ 0.29
SAFB2-205ENST00000590000 YBX2Q9Y2T7 364 aaKnown RBP16.85■□□□□ 0.29
SAFB2-205ENST00000590000 TMEM232C9JQI7 657 aa16.84■□□□□ 0.29
SAFB2-205ENST00000590000 BMP3P12645 472 aa16.84■□□□□ 0.29
SAFB2-205ENST00000590000 SMPD1P17405 629 aa16.84■□□□□ 0.29
SAFB2-205ENST00000590000 GNASQ5JWF2 1037 aa16.84■□□□□ 0.29
SAFB2-205ENST00000590000 TAPT1Q6NXT6 567 aa16.84■□□□□ 0.29
SAFB2-205ENST00000590000 CHST13Q8NET6 341 aa16.84■□□□□ 0.29
SAFB2-205ENST00000590000 WNT8AQ9H1J5 351 aa16.84■□□□□ 0.29
SAFB2-205ENST00000590000 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.84■□□□□ 0.29
SAFB2-205ENST00000590000 SCN5AQ14524 2016 aa16.84■□□□□ 0.29
SAFB2-205ENST00000590000 A0A0U1RQG5 324 aaPredicted RBP16.83■□□□□ 0.28
SAFB2-205ENST00000590000 PATL2C9JE40 543 aaKnown RBP16.83■□□□□ 0.28
SAFB2-205ENST00000590000 TTLL1O95922 423 aa16.83■□□□□ 0.28
SAFB2-205ENST00000590000 TDO2P48775 406 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms