RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 STX8Q9UNK0 236 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 UNC80Q8N2C7 3258 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 TSPY2A6NKD2 308 aa19.32■□□□□ 0.68
MBD3-206ENST00000589901 DUSP11O75319 330 aaKnown RBP19.32■□□□□ 0.68
MBD3-206ENST00000589901 SLC1A4P43007 532 aa19.32■□□□□ 0.68
MBD3-206ENST00000589901 CNTN2Q02246 1040 aa19.32■□□□□ 0.68
MBD3-206ENST00000589901 IKQ13123 557 aaPredicted RBP19.32■□□□□ 0.68
MBD3-206ENST00000589901 KCNA10Q16322 511 aa19.32■□□□□ 0.68
MBD3-206ENST00000589901 CCSAPQ6IQ19 270 aaPredicted RBP19.32■□□□□ 0.68
MBD3-206ENST00000589901 RASGRP2Q7LDG7 609 aa19.32■□□□□ 0.68
MBD3-206ENST00000589901 KLHDC9Q8NEP7 349 aa19.32■□□□□ 0.68
MBD3-206ENST00000589901 AGBL1Q96MI9 1066 aa19.32■□□□□ 0.68
MBD3-206ENST00000589901 GUCD1Q96NT3 240 aa19.32■□□□□ 0.68
MBD3-206ENST00000589901 TSEN34Q9BSV6 310 aaKnown RBP19.32■□□□□ 0.68
MBD3-206ENST00000589901 ZBTB47Q9UFB7 747 aaPredicted RBP19.32■□□□□ 0.68
MBD3-206ENST00000589901 MYH4Q9Y623 1939 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 ZNF536O15090 1300 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 DLL1O00548 723 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 SNAP25P60880 206 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 CCDC144BQ3MJ40 725 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 KCTD1Q719H9 257 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 ARMCX2Q7L311 632 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 FAM160B2Q86V87 743 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 CCDC144CPQ8IYA2 1237 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 CHURC1Q8WUH1 139 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 STAG1Q8WVM7 1258 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 ABHD16BQ9H3Z7 469 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 STARD7Q9NQZ5 370 aa19.31■□□□□ 0.68
MBD3-206ENST00000589901 MOXD2PA6NHM9 499 aa19.3■□□□□ 0.68
MBD3-206ENST00000589901 KIAA0355O15063 1070 aa19.3■□□□□ 0.68
MBD3-206ENST00000589901 FDX1P10109 184 aa19.3■□□□□ 0.68
MBD3-206ENST00000589901 EPHB4P54760 987 aa19.3■□□□□ 0.68
MBD3-206ENST00000589901 FAAP100Q0VG06 881 aa19.3■□□□□ 0.68
MBD3-206ENST00000589901 NUP133Q8WUM0 1156 aa19.3■□□□□ 0.68
MBD3-206ENST00000589901 EVI5LQ96CN4 794 aa19.3■□□□□ 0.68
MBD3-206ENST00000589901 ACAD9Q9H845 621 aa19.3■□□□□ 0.68
MBD3-206ENST00000589901 A1CFQ9NQ94 594 aaKnown RBP19.3■□□□□ 0.68
MBD3-206ENST00000589901 RNF146Q9NTX7 359 aa19.3■□□□□ 0.68
MBD3-206ENST00000589901 TMEM39AQ9NV64 488 aa19.3■□□□□ 0.68
MBD3-206ENST00000589901 EYSQ5T1H1 3165 aa19.3■□□□□ 0.68
MBD3-206ENST00000589901 RANBP6O60518 1105 aaKnown RBP19.29■□□□□ 0.68
MBD3-206ENST00000589901 C6orf222P0C671 652 aaPredicted RBP19.29■□□□□ 0.68
MBD3-206ENST00000589901 RAG1P15918 1043 aa19.29■□□□□ 0.68
MBD3-206ENST00000589901 PDE1AP54750 535 aa19.29■□□□□ 0.68
MBD3-206ENST00000589901 ZNF697Q5TEC3 545 aa19.29■□□□□ 0.68
MBD3-206ENST00000589901 RCSD1Q6JBY9 416 aa19.29■□□□□ 0.68
MBD3-206ENST00000589901 ANKRD33Q7Z3H0 272 aa19.29■□□□□ 0.68
MBD3-206ENST00000589901 FAM133AQ8N9E0 248 aa19.29■□□□□ 0.68
MBD3-206ENST00000589901 FAM227BQ96M60 508 aa19.29■□□□□ 0.68
MBD3-206ENST00000589901 KATNBL1Q9H079 304 aa19.29■□□□□ 0.68
MBD3-206ENST00000589901 ANAPC4Q9UJX5 808 aa19.29■□□□□ 0.68
MBD3-206ENST00000589901 MTMR7Q9Y216 660 aa19.29■□□□□ 0.68
MBD3-206ENST00000589901 SOWAHBA6NEL2 793 aa19.28■□□□□ 0.68
MBD3-206ENST00000589901 PLA2G6O60733 806 aa19.28■□□□□ 0.68
MBD3-206ENST00000589901 ALAS1P13196 640 aa19.28■□□□□ 0.68
MBD3-206ENST00000589901 PPP4R3BQ5MIZ7 849 aa19.28■□□□□ 0.68
MBD3-206ENST00000589901 CCDC174Q6PII3 467 aa19.28■□□□□ 0.68
MBD3-206ENST00000589901 TOX2Q96NM4 488 aa19.28■□□□□ 0.68
MBD3-206ENST00000589901 TRERF1Q96PN7 1200 aa19.28■□□□□ 0.68
MBD3-206ENST00000589901 HELLSQ9NRZ9 838 aa19.28■□□□□ 0.68
MBD3-206ENST00000589901 PRR12Q9ULL5 1215 aa19.28■□□□□ 0.68
MBD3-206ENST00000589901 DDX49Q9Y6V7 483 aaKnown RBP19.28■□□□□ 0.68
MBD3-206ENST00000589901 A0A0D9SFI3 127 aa19.27■□□□□ 0.68
MBD3-206ENST00000589901 DCDC2CA8MYV0 355 aa19.27■□□□□ 0.68
MBD3-206ENST00000589901 ASGR1P07306 291 aa19.27■□□□□ 0.68
MBD3-206ENST00000589901 CST5P28325 142 aaPredicted RBP19.27■□□□□ 0.68
MBD3-206ENST00000589901 GJA9P57773 515 aa19.27■□□□□ 0.68
MBD3-206ENST00000589901 HDAC1Q13547 482 aaPredicted RBP19.27■□□□□ 0.68
MBD3-206ENST00000589901 MUM1L1Q5H9M0 696 aa19.27■□□□□ 0.68
MBD3-206ENST00000589901 GLT1D1Q96MS3 346 aa19.27■□□□□ 0.68
MBD3-206ENST00000589901 UPF3AQ9H1J1 476 aaKnown RBP19.27■□□□□ 0.68
MBD3-206ENST00000589901 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.26■□□□□ 0.67
MBD3-206ENST00000589901 ORC4O43929 436 aa19.26■□□□□ 0.67
MBD3-206ENST00000589901 FGAP02671 866 aa19.26■□□□□ 0.67
MBD3-206ENST00000589901 FGRP09769 529 aa19.26■□□□□ 0.67
MBD3-206ENST00000589901 NOVP48745 357 aa19.26■□□□□ 0.67
MBD3-206ENST00000589901 ALX1Q15699 326 aa19.26■□□□□ 0.67
MBD3-206ENST00000589901 TKFCQ3LXA3 575 aa19.26■□□□□ 0.67
MBD3-206ENST00000589901 GNASQ5JWF2 1037 aa19.26■□□□□ 0.67
MBD3-206ENST00000589901 PCSK9Q8NBP7 692 aaKnown RBP19.26■□□□□ 0.67
MBD3-206ENST00000589901 SPC25Q9HBM1 224 aa19.26■□□□□ 0.67
MBD3-206ENST00000589901 TOMM22Q9NS69 142 aa19.26■□□□□ 0.67
MBD3-206ENST00000589901 CDH23Q9H251 3354 aa19.26■□□□□ 0.67
MBD3-206ENST00000589901 ASTN1O14525 1302 aa19.25■□□□□ 0.67
MBD3-206ENST00000589901 ELP1O95163 1332 aa19.25■□□□□ 0.67
MBD3-206ENST00000589901 CTAGE5O15320 804 aa19.25■□□□□ 0.67
MBD3-206ENST00000589901 CDK7P50613 346 aa19.25■□□□□ 0.67
MBD3-206ENST00000589901 SMAD3P84022 425 aaKnown RBP19.25■□□□□ 0.67
MBD3-206ENST00000589901 FPGSQ05932 587 aa19.25■□□□□ 0.67
MBD3-206ENST00000589901 CCDC96Q2M329 555 aa19.25■□□□□ 0.67
MBD3-206ENST00000589901 MCMDC2Q4G0Z9 681 aa19.25■□□□□ 0.67
MBD3-206ENST00000589901 RRP12Q5JTH9 1297 aaKnown RBP19.25■□□□□ 0.67
MBD3-206ENST00000589901 ZNF589Q86UQ0 364 aaPredicted RBP19.25■□□□□ 0.67
MBD3-206ENST00000589901 VTI1AQ96AJ9 217 aa19.25■□□□□ 0.67
MBD3-206ENST00000589901 RNPC3Q96LT9 517 aaKnown RBP19.25■□□□□ 0.67
MBD3-206ENST00000589901 SEMA6BQ9H3T3 888 aa19.25■□□□□ 0.67
MBD3-206ENST00000589901 ASB14A6NK59 587 aa19.24■□□□□ 0.67
MBD3-206ENST00000589901 PTGS1P23219 599 aa19.24■□□□□ 0.67
MBD3-206ENST00000589901 SLC16A2P36021 539 aa19.24■□□□□ 0.67
MBD3-206ENST00000589901 BEX3Q00994 111 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms