RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 H3BM21 787 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 PGRP06401 933 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 SLFN14P0C7P3 912 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 POLD1P28340 1107 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 GRK4P32298 578 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 GYS2P54840 703 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 ANAPC15P60006 121 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 SSRP1Q08945 709 aaKnown RBP7.27□□□□□ -1.25
SMAD4-208ENST00000589706 NCAPHQ15003 741 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 ZC3H12AQ5D1E8 599 aaKnown RBP7.27□□□□□ -1.25
SMAD4-208ENST00000589706 UTP14CQ5TAP6 766 aaKnown RBP7.27□□□□□ -1.25
SMAD4-208ENST00000589706 VHLLQ6RSH7 139 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 C1orf229Q6ZS94 237 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-208ENST00000589706 EEPD1Q7L9B9 569 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 MAP4K3Q8IVH8 894 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 FTSJ3Q8IY81 847 aaKnown RBP7.27□□□□□ -1.25
SMAD4-208ENST00000589706 GALNT11Q8NCW6 608 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 SLC9A7Q96T83 725 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 PHAXQ9H814 394 aaKnown RBP7.27□□□□□ -1.25
SMAD4-208ENST00000589706 COL4A3BPQ9Y5P4 624 aa7.27□□□□□ -1.25
SMAD4-208ENST00000589706 DHX57Q6P158 1386 aaKnown RBP7.27□□□□□ -1.25
SMAD4-208ENST00000589706 PARP4Q9UKK3 1724 aaKnown RBP7.27□□□□□ -1.25
SMAD4-208ENST00000589706 ATP7BP35670 1465 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 AATKQ6ZMQ8 1374 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 CHURC1-FNTBB4DL54 471 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 TOMM70O94826 608 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 VSIG8P0DPA2 414 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 HTRA3P83110 453 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 DDB1Q16531 1140 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 MTERF4Q7Z6M4 381 aaKnown RBP7.26□□□□□ -1.25
SMAD4-208ENST00000589706 SLC16A10Q8TF71 515 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 EDARADDQ8WWZ3 215 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 ACDQ96AP0 544 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 FEZ1Q99689 392 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 WDR18Q9BV38 432 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 WNT10AQ9GZT5 417 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 PCDH12Q9NPG4 1184 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 KLHL3Q9UH77 587 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 VPS8Q8N3P4 1428 aa7.26□□□□□ -1.25
SMAD4-208ENST00000589706 DDX3YO15523 660 aaKnown RBP7.25□□□□□ -1.25
SMAD4-208ENST00000589706 AOC2O75106 756 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 TERF1P54274 439 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 ETF1P62495 437 aaKnown RBP7.25□□□□□ -1.25
SMAD4-208ENST00000589706 RING1Q06587 406 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 Q6ZNB5 142 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 CHSY3Q70JA7 882 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 DMRTC2Q8IXT2 367 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-208ENST00000589706 MARCH10Q8NA82 808 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-208ENST00000589706 GALNT6Q8NCL4 622 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 ANP32BQ92688 251 aaKnown RBP7.25□□□□□ -1.25
SMAD4-208ENST00000589706 ACSF2Q96CM8 615 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-208ENST00000589706 BTBD6Q96KE9 485 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 CHMP4AQ9BY43 222 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 PRDM6Q9NQX0 595 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 RAD18Q9NS91 495 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 PCDHB10Q9UN67 800 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 HIF3AQ9Y2N7 669 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 PCDHGC5Q9Y5F6 944 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 PTCH2Q9Y6C5 1203 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 ADGRF5Q8IZF2 1346 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 SYNGAP1Q96PV0 1343 aa7.25□□□□□ -1.25
SMAD4-208ENST00000589706 WDR90Q96KV7 1748 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 PPLO60437 1756 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 FAM86C2PA6NEL3 165 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 LCE2BO14633 110 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 ADAM11O75078 769 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 DLGAP3O95886 979 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 RAG1P15918 1043 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 CD68P34810 354 aaPredicted RBP7.24□□□□□ -1.25
SMAD4-208ENST00000589706 ERVK-24P63145 666 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 SAFB2Q14151 953 aaKnown RBP eCLIP7.24□□□□□ -1.25
SMAD4-208ENST00000589706 TCEA2Q15560 299 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 ZNF827Q17R98 1081 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 TKFCQ3LXA3 575 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 TAF3Q5VWG9 929 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 KIAA1211LQ6NV74 962 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 FRAT1Q92837 279 aaPredicted RBP7.24□□□□□ -1.25
SMAD4-208ENST00000589706 PICK1Q9NRD5 415 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 KNDC1Q76NI1 1749 aa7.24□□□□□ -1.25
SMAD4-208ENST00000589706 SUSD5O60279 629 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 RAB11FIP3O75154 756 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 SLC7A5Q01650 507 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 FOXD4L6Q3SYB3 417 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-208ENST00000589706 PPM1JQ5JR12 505 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 EXOSC6Q5RKV6 272 aaKnown RBP7.23□□□□□ -1.25
SMAD4-208ENST00000589706 NUTM2GQ5VZR2 741 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 FOXD4L3Q6VB84 417 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-208ENST00000589706 MCATQ8IVS2 390 aaKnown RBP7.23□□□□□ -1.25
SMAD4-208ENST00000589706 SYNPOQ8N3V7 929 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 FAM13CQ8NE31 585 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 ZSWIM2Q8NEG5 633 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 NGDNQ8NEJ9 315 aaKnown RBP7.23□□□□□ -1.25
SMAD4-208ENST00000589706 SPATA9Q9BWV2 254 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 EPN3Q9H201 632 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 KCNK4Q9NYG8 393 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 ZNF214Q9UL59 606 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-208ENST00000589706 ANKARQ7Z5J8 1434 aa7.23□□□□□ -1.25
SMAD4-208ENST00000589706 YTHDC2Q9H6S0 1430 aaKnown RBP7.23□□□□□ -1.25
SMAD4-208ENST00000589706 COL24A1Q17RW2 1714 aa7.22□□□□□ -1.25
SMAD4-208ENST00000589706 BCL9O00512 1426 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms