RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 NID2Q14112 1375 aa24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 MGAMO43451 1857 aa24.7■■□□□ 1.55
R3HDM4-204ENST00000589428 CTGFP29279 349 aa24.7■■□□□ 1.54
R3HDM4-204ENST00000589428 SLC16A2P36021 539 aa24.7■■□□□ 1.54
R3HDM4-204ENST00000589428 CCT2P78371 535 aaKnown RBP24.7■■□□□ 1.54
R3HDM4-204ENST00000589428 NUP133Q8WUM0 1156 aa24.7■■□□□ 1.54
R3HDM4-204ENST00000589428 SLC38A10Q9HBR0 1119 aa24.7■■□□□ 1.54
R3HDM4-204ENST00000589428 HOXD10P28358 340 aa24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 CAP1Q01518 475 aa24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 TROAPQ12815 778 aa24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 WDR78Q5VTH9 848 aa24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 REPS2Q8NFH8 660 aa24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 COA7Q96BR5 231 aa24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 MOV10L1Q9BXT6 1211 aaKnown RBP24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 PORCNQ9H237 461 aa24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 METAP2P50579 478 aaKnown RBP eCLIP24.69■■□□□ 1.545e-7■□□□□ 8.2
R3HDM4-204ENST00000589428 RCAN1P53805 252 aa24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 GRM4Q14833 912 aa24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 SYNE3Q6ZMZ3 975 aa24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 INTS4Q96HW7 963 aaKnown RBP24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 TEX13BQ9BXU2 312 aa24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 ZNF214Q9UL59 606 aaPredicted RBP24.69■■□□□ 1.54
R3HDM4-204ENST00000589428 STAT3P40763 770 aa24.68■■□□□ 1.54
R3HDM4-204ENST00000589428 CCDC144CPQ8IYA2 1237 aa24.68■■□□□ 1.54
R3HDM4-204ENST00000589428 CPXCR1Q8N123 301 aa24.68■■□□□ 1.54
R3HDM4-204ENST00000589428 CTCFLQ8NI51 663 aaPredicted RBP24.68■■□□□ 1.54
R3HDM4-204ENST00000589428 GOLGA8AA7E2F4 631 aa24.67■■□□□ 1.54
R3HDM4-204ENST00000589428 CALM1P0DP23 149 aa24.67■■□□□ 1.54
R3HDM4-204ENST00000589428 CALM2P0DP24 149 aa24.67■■□□□ 1.54
R3HDM4-204ENST00000589428 CALM3P0DP25 149 aa24.67■■□□□ 1.54
R3HDM4-204ENST00000589428 COPB2P35606 906 aa24.67■■□□□ 1.54
R3HDM4-204ENST00000589428 OAZ1P54368 228 aa24.67■■□□□ 1.54
R3HDM4-204ENST00000589428 COL13A1Q5TAT6 717 aaPredicted RBP24.67■■□□□ 1.54
R3HDM4-204ENST00000589428 SNRNP48Q6IEG0 339 aaKnown RBP24.67■■□□□ 1.54
R3HDM4-204ENST00000589428 SHCBP1Q8NEM2 672 aa24.67■■□□□ 1.54
R3HDM4-204ENST00000589428 MAD2L2Q9UI95 211 aa24.67■■□□□ 1.54
R3HDM4-204ENST00000589428 ATP2A1O14983 1001 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 DHX16O60231 1041 aaKnown RBP24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 SLC25A27O95847 323 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 KIF5BP33176 963 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 PKN2Q16513 984 aaKnown RBP24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 NCAPG2Q86XI2 1143 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 RIOX2Q8IUF8 465 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 MAP3K14Q99558 947 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 RAVER2Q9HCJ3 691 aaKnown RBP24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 IVNS1ABPQ9Y6Y0 642 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 DTNBO60941 627 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 ERCC3P19447 782 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 CDC27P30260 824 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 PRMT2P55345 433 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 GPR142Q7Z601 462 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 STAG2Q8N3U4 1231 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 UBA5Q9GZZ9 404 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 RANBP17Q9H2T7 1088 aaKnown RBP24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 MROH8Q9H579 483 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 FAM217BQ9NTX9 383 aaPredicted RBP24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 SRRDQ9UH36 339 aa24.66■■□□□ 1.54
R3HDM4-204ENST00000589428 PALM3A6NDB9 673 aaPredicted RBP24.65■■□□□ 1.54
R3HDM4-204ENST00000589428 KLRF2D3W0D1 207 aa24.65■■□□□ 1.54
R3HDM4-204ENST00000589428 CCDC174Q6PII3 467 aa24.65■■□□□ 1.54
R3HDM4-204ENST00000589428 PLEKHH3Q7Z736 793 aa24.65■■□□□ 1.54
R3HDM4-204ENST00000589428 CPVLQ9H3G5 476 aa24.65■■□□□ 1.54
R3HDM4-204ENST00000589428 CTDNEP1O95476 244 aa24.64■■□□□ 1.54
R3HDM4-204ENST00000589428 SNAP25P60880 206 aa24.64■■□□□ 1.54
R3HDM4-204ENST00000589428 RTN1Q16799 776 aa24.64■■□□□ 1.54
R3HDM4-204ENST00000589428 FANCBQ8NB91 859 aa24.64■■□□□ 1.54
R3HDM4-204ENST00000589428 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.64■■□□□ 1.54
R3HDM4-204ENST00000589428 ADD1P35611 737 aaKnown RBP24.64■■□□□ 1.53
R3HDM4-204ENST00000589428 PRKCZQ05513 592 aa24.64■■□□□ 1.53
R3HDM4-204ENST00000589428 SOCS4Q8WXH5 440 aa24.64■■□□□ 1.53
R3HDM4-204ENST00000589428 PTPN22Q9Y2R2 807 aa24.64■■□□□ 1.53
R3HDM4-204ENST00000589428 FBXO46Q6PJ61 603 aaPredicted RBP24.63■■□□□ 1.53
R3HDM4-204ENST00000589428 ADGRF4Q8IZF3 695 aa24.63■■□□□ 1.53
R3HDM4-204ENST00000589428 NSUN7Q8NE18 718 aaKnown RBP24.63■■□□□ 1.53
R3HDM4-204ENST00000589428 MCOLN1Q9GZU1 580 aa24.63■■□□□ 1.53
R3HDM4-204ENST00000589428 JAK2O60674 1132 aa24.62■■□□□ 1.53
R3HDM4-204ENST00000589428 GNAQP50148 359 aa24.62■■□□□ 1.53
R3HDM4-204ENST00000589428 NUDT12Q9BQG2 462 aa24.62■■□□□ 1.53
R3HDM4-204ENST00000589428 LLPHQ9BRT6 129 aaKnown RBP24.62■■□□□ 1.53
R3HDM4-204ENST00000589428 PNMA2Q9UL42 364 aa24.62■■□□□ 1.53
R3HDM4-204ENST00000589428 CCPG1Q9ULG6 757 aa24.62■■□□□ 1.53
R3HDM4-204ENST00000589428 ZNF536O15090 1300 aa24.62■■□□□ 1.53
R3HDM4-204ENST00000589428 ICAM1P05362 532 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 FLT3LGP49771 235 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 CDC37Q16543 378 aaPredicted RBP24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 RAET1EQ8TD07 263 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 VAT1LQ9HCJ6 419 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 CPLX1O14810 134 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 PTPREP23469 700 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 DDIT3P35638 169 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 NTRK3Q16288 839 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 AGBL1Q96MI9 1066 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 LZTS2Q9BRK4 669 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 GABRQQ9UN88 632 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 SMC3Q9UQE7 1217 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 RIPK3Q9Y572 518 aa24.61■■□□□ 1.53
R3HDM4-204ENST00000589428 PLXNB2O15031 1838 aa24.6■■□□□ 1.53
R3HDM4-204ENST00000589428 PTPDC1A2A3K4 754 aa24.6■■□□□ 1.53
R3HDM4-204ENST00000589428 STRNO43815 780 aa24.6■■□□□ 1.53
R3HDM4-204ENST00000589428 PPP2R5BQ15173 497 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms