RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 TTBK2Q6IQ55 1244 aa22.57■■□□□ 1.2
CIRBP-221ENST00000589161 CCDC174Q6PII3 467 aa22.57■■□□□ 1.2
CIRBP-221ENST00000589161 KAT14Q9H8E8 782 aa22.57■■□□□ 1.2
CIRBP-221ENST00000589161 HOMER2Q9NSB8 354 aa22.57■■□□□ 1.2
CIRBP-221ENST00000589161 FRMPD2Q68DX3 1309 aaPredicted RBP22.57■■□□□ 1.2
CIRBP-221ENST00000589161 H0YGN5 161 aa22.56■■□□□ 1.2
CIRBP-221ENST00000589161 EVI5O60447 810 aa22.56■■□□□ 1.2
CIRBP-221ENST00000589161 SNHG28P0DPA3 235 aa22.56■■□□□ 1.2
CIRBP-221ENST00000589161 SLC16A2P36021 539 aa22.56■■□□□ 1.2
CIRBP-221ENST00000589161 ZNF543Q08ER8 600 aa22.56■■□□□ 1.2
CIRBP-221ENST00000589161 TRDNQ13061 729 aa22.56■■□□□ 1.2
CIRBP-221ENST00000589161 ZNF467Q7Z7K2 595 aaPredicted RBP22.56■■□□□ 1.2
CIRBP-221ENST00000589161 TRERF1Q96PN7 1200 aa22.56■■□□□ 1.2
CIRBP-221ENST00000589161 UBAC1Q9BSL1 405 aa22.56■■□□□ 1.2
CIRBP-221ENST00000589161 RANBP17Q9H2T7 1088 aaKnown RBP22.56■■□□□ 1.2
CIRBP-221ENST00000589161 RNF146Q9NTX7 359 aa22.56■■□□□ 1.2
CIRBP-221ENST00000589161 ICAM1P05362 532 aa22.55■■□□□ 1.2
CIRBP-221ENST00000589161 ALAS1P13196 640 aa22.55■■□□□ 1.2
CIRBP-221ENST00000589161 SNAP25P60880 206 aa22.55■■□□□ 1.2
CIRBP-221ENST00000589161 GPATCH4Q5T3I0 446 aaKnown RBP22.55■■□□□ 1.2
CIRBP-221ENST00000589161 MAMDC4Q6UXC1 1216 aa22.55■■□□□ 1.2
CIRBP-221ENST00000589161 ARRDC4Q8NCT1 418 aa22.55■■□□□ 1.2
CIRBP-221ENST00000589161 PNMA1Q8ND90 353 aa22.55■■□□□ 1.2
CIRBP-221ENST00000589161 PNMA2Q9UL42 364 aa22.55■■□□□ 1.2
CIRBP-221ENST00000589161 CCPG1Q9ULG6 757 aa22.55■■□□□ 1.2
CIRBP-221ENST00000589161 CNPY2Q9Y2B0 182 aa22.55■■□□□ 1.2
CIRBP-221ENST00000589161 SYNGAP1Q96PV0 1343 aa22.55■■□□□ 1.2
CIRBP-221ENST00000589161 KIAA1211Q6ZU35 1233 aa22.54■■□□□ 1.2
CIRBP-221ENST00000589161 ENAHQ8N8S7 591 aaPredicted RBP22.54■■□□□ 1.2
CIRBP-221ENST00000589161 MAP4K1Q92918 833 aa22.54■■□□□ 1.2
CIRBP-221ENST00000589161 ZNFX1Q9P2E3 1918 aaKnown RBP22.54■■□□□ 1.2
CIRBP-221ENST00000589161 LAMA4Q16363 1823 aa22.54■■□□□ 1.2
CIRBP-221ENST00000589161 TNKSO95271 1327 aa22.54■■□□□ 1.2
CIRBP-221ENST00000589161 CYP21A2P08686 494 aa22.53■■□□□ 1.2
CIRBP-221ENST00000589161 COL6A1P12109 1028 aa22.53■■□□□ 1.2
CIRBP-221ENST00000589161 BMP2KLQ5H9B9 411 aa22.53■■□□□ 1.2
CIRBP-221ENST00000589161 PFASO15067 1338 aa22.53■■□□□ 1.2
CIRBP-221ENST00000589161 POTEB2H3BUK9 544 aa22.52■■□□□ 1.2
CIRBP-221ENST00000589161 DNM1LO00429 736 aa22.52■■□□□ 1.2
CIRBP-221ENST00000589161 CCDC136Q96JN2 1154 aa22.52■■□□□ 1.2
CIRBP-221ENST00000589161 A1CFQ9NQ94 594 aaKnown RBP22.52■■□□□ 1.2
CIRBP-221ENST00000589161 ZNF865P0CJ78 1059 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-221ENST00000589161 IFIT1BQ5T764 474 aaKnown RBP22.51■■□□□ 1.19
CIRBP-221ENST00000589161 SNAI1O95863 264 aaPredicted RBP22.5■■□□□ 1.19
CIRBP-221ENST00000589161 RARBP10826 455 aa22.5■■□□□ 1.19
CIRBP-221ENST00000589161 AKR1A1P14550 325 aa22.5■■□□□ 1.19
CIRBP-221ENST00000589161 TAL1P17542 331 aaPredicted RBP22.5■■□□□ 1.19
CIRBP-221ENST00000589161 ASPRV1Q53RT3 343 aa22.5■■□□□ 1.19
CIRBP-221ENST00000589161 ANO1Q5XXA6 986 aa22.5■■□□□ 1.19
CIRBP-221ENST00000589161 RALYLQ86SE5 291 aaKnown RBP22.5■■□□□ 1.19
CIRBP-221ENST00000589161 FAM133AQ8N9E0 248 aa22.5■■□□□ 1.19
CIRBP-221ENST00000589161 NCOA7Q8NI08 942 aa22.5■■□□□ 1.19
CIRBP-221ENST00000589161 KBTBD13C9JR72 458 aa22.49■■□□□ 1.19
CIRBP-221ENST00000589161 E7EWF7 191 aa22.49■■□□□ 1.19
CIRBP-221ENST00000589161 GOLGA8HP0CJ92 632 aa22.49■■□□□ 1.19
CIRBP-221ENST00000589161 CNTN2Q02246 1040 aa22.49■■□□□ 1.19
CIRBP-221ENST00000589161 MUM1L1Q5H9M0 696 aa22.49■■□□□ 1.19
CIRBP-221ENST00000589161 GJC2Q5T442 439 aaPredicted RBP22.49■■□□□ 1.19
CIRBP-221ENST00000589161 CYB5R4Q7L1T6 521 aa22.49■■□□□ 1.19
CIRBP-221ENST00000589161 ESYT1Q9BSJ8 1104 aa22.49■■□□□ 1.19
CIRBP-221ENST00000589161 SENP6Q9GZR1 1112 aaPredicted RBP22.49■■□□□ 1.19
CIRBP-221ENST00000589161 ABHD16BQ9H3Z7 469 aa22.49■■□□□ 1.19
CIRBP-221ENST00000589161 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.49■■□□□ 1.19
CIRBP-221ENST00000589161 FAM184BQ9ULE4 1060 aa22.49■■□□□ 1.19
CIRBP-221ENST00000589161 RBM8AQ9Y5S9 174 aaKnown RBP22.49■■□□□ 1.19
CIRBP-221ENST00000589161 ERICH2A1L162 156 aa22.48■■□□□ 1.19
CIRBP-221ENST00000589161 ASB14A6NK59 587 aa22.48■■□□□ 1.19
CIRBP-221ENST00000589161 NEFLP07196 543 aa22.48■■□□□ 1.19
CIRBP-221ENST00000589161 PARP1P09874 1014 aaKnown RBP22.48■■□□□ 1.19
CIRBP-221ENST00000589161 SEC23AQ15436 765 aa22.48■■□□□ 1.19
CIRBP-221ENST00000589161 NSMFQ6X4W1 530 aa22.48■■□□□ 1.19
CIRBP-221ENST00000589161 FGD4Q96M96 766 aa22.48■■□□□ 1.19
CIRBP-221ENST00000589161 UBA5Q9GZZ9 404 aa22.48■■□□□ 1.19
CIRBP-221ENST00000589161 XPNPEP3Q9NQH7 507 aa22.48■■□□□ 1.19
CIRBP-221ENST00000589161 CYP39A1Q9NYL5 469 aa22.48■■□□□ 1.19
CIRBP-221ENST00000589161 ACVR2BQ13705 512 aa22.47■■□□□ 1.19
CIRBP-221ENST00000589161 SART3Q15020 963 aaKnown RBP22.47■■□□□ 1.19
CIRBP-221ENST00000589161 ARMCX2Q7L311 632 aa22.47■■□□□ 1.19
CIRBP-221ENST00000589161 SKAP1Q86WV1 359 aa22.47■■□□□ 1.19
CIRBP-221ENST00000589161 CCDC144CPQ8IYA2 1237 aa22.47■■□□□ 1.19
CIRBP-221ENST00000589161 C7orf61Q8IZ16 206 aa22.47■■□□□ 1.19
CIRBP-221ENST00000589161 LSG1Q9H089 658 aaKnown RBP22.47■■□□□ 1.19
CIRBP-221ENST00000589161 ZHX1Q9UKY1 873 aaPredicted RBP22.47■■□□□ 1.19
CIRBP-221ENST00000589161 WDR19Q8NEZ3 1342 aa22.47■■□□□ 1.19
CIRBP-221ENST00000589161 PLXNA1Q9UIW2 1896 aa22.47■■□□□ 1.19
CIRBP-221ENST00000589161 SOWAHBA6NEL2 793 aa22.46■■□□□ 1.19
CIRBP-221ENST00000589161 IFIT3O14879 490 aaKnown RBP22.46■■□□□ 1.19
CIRBP-221ENST00000589161 MYCNP04198 464 aaPredicted RBP22.46■■□□□ 1.19
CIRBP-221ENST00000589161 LRRC41Q15345 812 aa22.46■■□□□ 1.19
CIRBP-221ENST00000589161 RNF180Q86T96 592 aa22.46■■□□□ 1.19
CIRBP-221ENST00000589161 CASC1Q6TDU7 716 aa22.45■■□□□ 1.18
CIRBP-221ENST00000589161 ADGRF4Q8IZF3 695 aa22.45■■□□□ 1.18
CIRBP-221ENST00000589161 COLQQ9Y215 455 aaPredicted RBP22.45■■□□□ 1.18
CIRBP-221ENST00000589161 TAF6LQ9Y6J9 622 aa22.45■■□□□ 1.18
CIRBP-221ENST00000589161 BAATQ14032 418 aaPredicted RBP22.44■■□□□ 1.18
CIRBP-221ENST00000589161 WTAPQ15007 396 aa22.44■■□□□ 1.18
CIRBP-221ENST00000589161 LRRC26Q2I0M4 334 aa22.44■■□□□ 1.18
CIRBP-221ENST00000589161 HABP4Q5JVS0 413 aaKnown RBP22.44■■□□□ 1.18
CIRBP-221ENST00000589161 STOX1Q6ZVD7 989 aa22.44■■□□□ 1.18
CIRBP-221ENST00000589161 CLEC4DQ8WXI8 215 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms