RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 OXER1Q8TDS5 423 aa25.57■■□□□ 1.68
ATG4D-209ENST00000588857 CAPNS2Q96L46 248 aa25.57■■□□□ 1.68
ATG4D-209ENST00000588857 GDPD2Q9HCC8 539 aa25.57■■□□□ 1.68
ATG4D-209ENST00000588857 EMILIN3Q9NT22 766 aa25.57■■□□□ 1.68
ATG4D-209ENST00000588857 PCDHA4Q9UN74 947 aa25.57■■□□□ 1.68
ATG4D-209ENST00000588857 AFG3L2Q9Y4W6 797 aa25.57■■□□□ 1.68
ATG4D-209ENST00000588857 HUNKP57058 714 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 NR5A1Q13285 461 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 CYP4F22Q6NT55 531 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 BLIDQ8IZY5 108 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 C6orf50Q9HD87 102 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 TRPM7Q96QT4 1865 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 VCAM1P19320 739 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 GNA11P29992 359 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 NPY5RQ15761 445 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 PPP1R18Q6NYC8 613 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 KIFC2Q96AC6 838 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 COA7Q96BR5 231 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 TANGO6Q9C0B7 1094 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 ZMYND12Q9H0C1 365 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 ELP3Q9H9T3 547 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 TMOD4Q9NZQ9 345 aa25.56■■□□□ 1.68
ATG4D-209ENST00000588857 SMCO2A6NFE2 343 aa25.55■■□□□ 1.68
ATG4D-209ENST00000588857 PPP1R11O60927 126 aaPredicted RBP25.55■■□□□ 1.68
ATG4D-209ENST00000588857 HMGCS2P54868 508 aa25.55■■□□□ 1.68
ATG4D-209ENST00000588857 DAGLBQ8NCG7 672 aa25.55■■□□□ 1.68
ATG4D-209ENST00000588857 PTPRFP10586 1907 aa25.54■■□□□ 1.68
ATG4D-209ENST00000588857 ESYT2A0FGR8 921 aa25.54■■□□□ 1.68
ATG4D-209ENST00000588857 DGKZQ13574 1117 aa25.54■■□□□ 1.68
ATG4D-209ENST00000588857 ERO1BQ86YB8 467 aa25.54■■□□□ 1.68
ATG4D-209ENST00000588857 TMEM87AQ8NBN3 555 aa25.54■■□□□ 1.68
ATG4D-209ENST00000588857 SPATA32Q96LK8 384 aa25.54■■□□□ 1.68
ATG4D-209ENST00000588857 C12orf42Q96LP6 360 aa25.54■■□□□ 1.68
ATG4D-209ENST00000588857 AMNQ9BXJ7 453 aa25.54■■□□□ 1.68
ATG4D-209ENST00000588857 LMBRD1Q9NUN5 540 aa25.54■■□□□ 1.68
ATG4D-209ENST00000588857 SNAP25P60880 206 aa25.53■■□□□ 1.68
ATG4D-209ENST00000588857 FKBP1BP68106 108 aa25.53■■□□□ 1.68
ATG4D-209ENST00000588857 CEBPZQ03701 1054 aaKnown RBP25.53■■□□□ 1.68
ATG4D-209ENST00000588857 PPATQ06203 517 aa25.53■■□□□ 1.68
ATG4D-209ENST00000588857 TRAF1Q13077 416 aa25.53■■□□□ 1.68
ATG4D-209ENST00000588857 SAMD1Q6SPF0 538 aaPredicted RBP25.53■■□□□ 1.68
ATG4D-209ENST00000588857 FBXO11Q86XK2 927 aa25.53■■□□□ 1.68
ATG4D-209ENST00000588857 BICD2Q8TD16 824 aa25.53■■□□□ 1.68
ATG4D-209ENST00000588857 CLMNQ96JQ2 1002 aa25.53■■□□□ 1.68
ATG4D-209ENST00000588857 USP28Q96RU2 1077 aa25.53■■□□□ 1.68
ATG4D-209ENST00000588857 SLF1Q9BQI6 1058 aa25.53■■□□□ 1.68
ATG4D-209ENST00000588857 RPAP3Q9H6T3 665 aaPredicted RBP25.53■■□□□ 1.68
ATG4D-209ENST00000588857 PCDHA1Q9Y5I3 950 aa25.53■■□□□ 1.68
ATG4D-209ENST00000588857 GRM1Q13255 1194 aa25.52■■□□□ 1.68
ATG4D-209ENST00000588857 RILPL1Q5EBL4 403 aa25.52■■□□□ 1.68
ATG4D-209ENST00000588857 PRPF38AQ8NAV1 312 aaKnown RBP25.52■■□□□ 1.68
ATG4D-209ENST00000588857 FBXO28Q9NVF7 368 aa25.52■■□□□ 1.68
ATG4D-209ENST00000588857 HSPA1AP0DMV8 641 aaKnown RBP25.52■■□□□ 1.68
ATG4D-209ENST00000588857 HSPA1BP0DMV9 641 aaKnown RBP25.52■■□□□ 1.68
ATG4D-209ENST00000588857 ADCY7P51828 1080 aa25.52■■□□□ 1.68
ATG4D-209ENST00000588857 LEO1Q8WVC0 666 aaPredicted RBP25.52■■□□□ 1.68
ATG4D-209ENST00000588857 TNFRSF25Q93038 417 aa25.52■■□□□ 1.68
ATG4D-209ENST00000588857 OTUD5Q96G74 571 aa25.52■■□□□ 1.68
ATG4D-209ENST00000588857 RTEL1Q9NZ71 1219 aa25.52■■□□□ 1.68
ATG4D-209ENST00000588857 PARP14Q460N5 1801 aa25.51■■□□□ 1.67
ATG4D-209ENST00000588857 SPDYE5A6NIY4 337 aa25.51■■□□□ 1.67
ATG4D-209ENST00000588857 UNCXA6NJT0 531 aa25.51■■□□□ 1.67
ATG4D-209ENST00000588857 FLOT1O75955 427 aa25.51■■□□□ 1.67
ATG4D-209ENST00000588857 LDLRAD1Q5T700 205 aa25.51■■□□□ 1.67
ATG4D-209ENST00000588857 CNKSR2Q8WXI2 1034 aa25.51■■□□□ 1.67
ATG4D-209ENST00000588857 RANBP17Q9H2T7 1088 aaKnown RBP25.51■■□□□ 1.67
ATG4D-209ENST00000588857 NOL7Q9UMY1 257 aaKnown RBP25.51■■□□□ 1.67
ATG4D-209ENST00000588857 ELP1O95163 1332 aa25.5■■□□□ 1.67
ATG4D-209ENST00000588857 SH3D19Q5HYK7 790 aa25.5■■□□□ 1.67
ATG4D-209ENST00000588857 RGMBQ6NW40 437 aa25.5■■□□□ 1.67
ATG4D-209ENST00000588857 FTOQ9C0B1 505 aaKnown RBP eCLIP25.5■■□□□ 1.67
ATG4D-209ENST00000588857 POLR3EQ9NVU0 708 aa25.5■■□□□ 1.67
ATG4D-209ENST00000588857 CCDC194A0A1B0GVG4 234 aa25.49■■□□□ 1.67
ATG4D-209ENST00000588857 MAP2K2P36507 400 aa25.49■■□□□ 1.67
ATG4D-209ENST00000588857 MRPL12P52815 198 aaKnown RBP25.49■■□□□ 1.67
ATG4D-209ENST00000588857 SKOR2Q2VWA4 1001 aaPredicted RBP25.49■■□□□ 1.67
ATG4D-209ENST00000588857 USH1GQ495M9 461 aa25.49■■□□□ 1.67
ATG4D-209ENST00000588857 ANO1Q5XXA6 986 aa25.49■■□□□ 1.67
ATG4D-209ENST00000588857 CCDC174Q6PII3 467 aa25.49■■□□□ 1.67
ATG4D-209ENST00000588857 GLT8D2Q9H1C3 349 aa25.49■■□□□ 1.67
ATG4D-209ENST00000588857 PCDHA6Q9UN73 950 aa25.49■■□□□ 1.67
ATG4D-209ENST00000588857 PCDHA8Q9Y5H6 950 aa25.49■■□□□ 1.67
ATG4D-209ENST00000588857 CLIC4Q9Y696 253 aa25.49■■□□□ 1.67
ATG4D-209ENST00000588857 M0R2N6 131 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 PPIL2Q13356 520 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 PIK3AP1Q6ZUJ8 805 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 REXO1Q8N1G1 1221 aaKnown RBP25.48■■□□□ 1.67
ATG4D-209ENST00000588857 CUL5Q93034 780 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 PSTPIP2Q9H939 334 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 RIC8AQ9NPQ8 531 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 RCOR1Q9UKL0 485 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 CXCL11O14625 94 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 ADAMTS3O15072 1205 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 TRAK2O60296 914 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 AOC2O75106 756 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 YEATS4O95619 227 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 STK38Q15208 465 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 SLC10A4Q96EP9 437 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 WBP1LQ9NX94 342 aa25.48■■□□□ 1.67
ATG4D-209ENST00000588857 PPP1R9AQ9ULJ8 1098 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms