RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 INCENPQ9NQS7 918 aa13.75□□□□□ -0.21
PRKCSH-207ENST00000588269 NRBP1Q9UHY1 535 aa13.75□□□□□ -0.21
PRKCSH-207ENST00000588269 OGDHLQ9ULD0 1010 aa13.75□□□□□ -0.21
PRKCSH-207ENST00000588269 DIS3Q9Y2L1 958 aaKnown RBP13.75□□□□□ -0.21
PRKCSH-207ENST00000588269 COL11A1P12107 1806 aaPredicted RBP13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 FRMPD3Q5JV73 1810 aa13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 CDC45O75419 566 aa13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 PDHBP11177 359 aa13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 SLC4A3P48751 1232 aa13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 IFIT1BQ5T764 474 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 ANKRD35Q8N283 1001 aa13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 PNMA1Q8ND90 353 aa13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 NCOA7Q8NI08 942 aa13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 RAVER2Q9HCJ3 691 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 FLRT1Q9NZU1 646 aa13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 CNPY2Q9Y2B0 182 aa13.74□□□□□ -0.21
PRKCSH-207ENST00000588269 DLL1O00548 723 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 ICAM1P05362 532 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 CNGA1P29973 690 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 ZNF543Q08ER8 600 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 LRRC26Q2I0M4 334 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 ASPRV1Q53RT3 343 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 SYDE2Q5VT97 1194 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 MAML3Q96JK9 1138 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 ESYT1Q9BSJ8 1104 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 ANO2Q9NQ90 1003 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 CCPG1Q9ULG6 757 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 PRR12Q9ULL5 1215 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 TACC3Q9Y6A5 838 aa13.73□□□□□ -0.21
PRKCSH-207ENST00000588269 FRMPD2Q68DX3 1309 aaPredicted RBP13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 A0A1W2PPC1 479 aa13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 MDM2Q00987 491 aaPredicted RBP13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 LHX8Q68G74 356 aa13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 BTNL9Q6UXG8 535 aa13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 ENAHQ8N8S7 591 aaPredicted RBP13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 NPLOC4Q8TAT6 608 aa13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 MAP4K1Q92918 833 aa13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 ZKSCAN3Q9BRR0 538 aa13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 IL25Q9H293 177 aa13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 HOMER2Q9NSB8 354 aa13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 RNF146Q9NTX7 359 aa13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 DDX20Q9UHI6 824 aaKnown RBP13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 RBM8AQ9Y5S9 174 aaKnown RBP13.72□□□□□ -0.21
PRKCSH-207ENST00000588269 LAMA3Q16787 3333 aa13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 SYNGAP1Q96PV0 1343 aa13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 CYP21A2P08686 494 aa13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 PARP1P09874 1014 aaKnown RBP13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 SNHG28P0DPA3 235 aa13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 ALAS1P13196 640 aa13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 CYP2C19P33261 490 aa13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 CCDC174Q6PII3 467 aa13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 ZNF467Q7Z7K2 595 aaPredicted RBP13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 DEFB123Q8N688 67 aa13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 ANKS1AQ92625 1134 aa13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 MPHOSPH6Q99547 160 aaKnown RBP13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 UBE2OQ9C0C9 1292 aaKnown RBP13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 RANBP17Q9H2T7 1088 aaKnown RBP13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 GPCPD1Q9NPB8 672 aa13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 ZSWIM5Q9P217 1185 aa13.71□□□□□ -0.21
PRKCSH-207ENST00000588269 WDR19Q8NEZ3 1342 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 POTEB2H3BUK9 544 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 IFIT3O14879 490 aaKnown RBP13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 SEPT4O43236 478 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 DHX16O60231 1041 aaKnown RBP13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 COBLO75128 1261 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 PGK2P07205 417 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 CYBAP13498 195 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 BMP8BP34820 402 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 PTH1RQ03431 593 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 TRAF1Q13077 416 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 CHMP4CQ96CF2 233 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 TRERF1Q96PN7 1200 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 TINF2Q9BSI4 451 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 MTA3Q9BTC8 594 aa13.7□□□□□ -0.22
PRKCSH-207ENST00000588269 E7EWF7 191 aa13.69□□□□□ -0.22
PRKCSH-207ENST00000588269 RARBP10826 455 aa13.69□□□□□ -0.22
PRKCSH-207ENST00000588269 COL6A1P12109 1028 aa13.69□□□□□ -0.22
PRKCSH-207ENST00000588269 WTAPQ15007 396 aa13.69□□□□□ -0.22
PRKCSH-207ENST00000588269 ZNF792Q3KQV3 632 aa13.69□□□□□ -0.22
PRKCSH-207ENST00000588269 ANO1Q5XXA6 986 aa13.69□□□□□ -0.22
PRKCSH-207ENST00000588269 CATIPQ7Z7H3 387 aa13.69□□□□□ -0.22
PRKCSH-207ENST00000588269 TDHQ8IZJ6 230 aa13.69□□□□□ -0.22
PRKCSH-207ENST00000588269 ARRDC4Q8NCT1 418 aa13.69□□□□□ -0.22
PRKCSH-207ENST00000588269 MAF1Q9H063 256 aa13.69□□□□□ -0.22
PRKCSH-207ENST00000588269 PPP4R2Q9NY27 417 aa13.69□□□□□ -0.22
PRKCSH-207ENST00000588269 ZNF536O15090 1300 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 ASB14A6NK59 587 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 B4DLN1 442 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 KBTBD13C9JR72 458 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 AKR1A1P14550 325 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 MCM5P33992 734 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 SLC16A2P36021 539 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 MRPL12P52815 198 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 ATN1P54259 1190 aaPredicted RBP13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 KRT32Q14532 448 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 TMEM67Q5HYA8 995 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 RASGRP2Q7LDG7 609 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 TRPV1Q8NER1 839 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms