RNA–Protein interactions for RNA: ENST00000588094.1

ZNF404-203, Transcript of zinc finger protein 404, humanhuman

TSL 3

Gene ZNF404, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-203ENST00000588094 SCRN1Q12765 414 aa11.28□□□□□ -0.6
ZNF404-203ENST00000588094 STK3Q13188 491 aa11.28□□□□□ -0.6
ZNF404-203ENST00000588094 NTRK3Q16288 839 aa11.28□□□□□ -0.6
ZNF404-203ENST00000588094 REPS2Q8NFH8 660 aa11.28□□□□□ -0.6
ZNF404-203ENST00000588094 GTF3C6Q969F1 213 aa11.28□□□□□ -0.6
ZNF404-203ENST00000588094 SNX21Q969T3 373 aa11.28□□□□□ -0.6
ZNF404-203ENST00000588094 RANBP17Q9H2T7 1088 aaKnown RBP11.28□□□□□ -0.6
ZNF404-203ENST00000588094 CPVLQ9H3G5 476 aa11.28□□□□□ -0.6
ZNF404-203ENST00000588094 JMJD4Q9H9V9 463 aa11.28□□□□□ -0.6
ZNF404-203ENST00000588094 NCOA5Q9HCD5 579 aaKnown RBP11.28□□□□□ -0.6
ZNF404-203ENST00000588094 WBP1LQ9NX94 342 aa11.28□□□□□ -0.6
ZNF404-203ENST00000588094 RBPJLQ9UBG7 517 aa11.28□□□□□ -0.6
ZNF404-203ENST00000588094 MORF4L1Q9UBU8 362 aa11.28□□□□□ -0.6
ZNF404-203ENST00000588094 ATP2A1O14983 1001 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 DHX16O60231 1041 aaKnown RBP11.27□□□□□ -0.61
ZNF404-203ENST00000588094 ZBED4O75132 1171 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 TRPA1O75762 1119 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 CNMDO75829 334 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 BCRP11274 1271 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 IFNAR1P17181 557 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 OAZ1P54368 228 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 FAM110CQ1W6H9 321 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 C17orf99Q6UX52 265 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 CMTR1Q8N1G2 835 aaKnown RBP11.27□□□□□ -0.61
ZNF404-203ENST00000588094 R3HDMLQ9H3Y0 253 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 TXNRD2Q9NNW7 524 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 BTBD7Q9P203 1132 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 ZNF214Q9UL59 606 aaPredicted RBP11.27□□□□□ -0.61
ZNF404-203ENST00000588094 ZSWIM8A7E2V4 1837 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 CNTNAP5Q8WYK1 1306 aa11.27□□□□□ -0.61
ZNF404-203ENST00000588094 CPLX1O14810 134 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 ZBTB5O15062 677 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 TBC1D8O95759 1140 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 ERVK-24P63145 666 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 ST3GAL1Q11201 340 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 TMEM132BQ14DG7 1078 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 CDC37Q16543 378 aaPredicted RBP11.26□□□□□ -0.61
ZNF404-203ENST00000588094 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
ZNF404-203ENST00000588094 ANKRD13CQ8N6S4 541 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 NECAB1Q8N987 351 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 GPRC5AQ8NFJ5 357 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 TMX3Q96JJ7 454 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 BEGAINQ9BUH8 593 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 VAT1LQ9HCJ6 419 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 CPA4Q9UI42 421 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 PNMA2Q9UL42 364 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 LCTP09848 1927 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 ZNF536O15090 1300 aa11.26□□□□□ -0.61
ZNF404-203ENST00000588094 MCM3APO60318 1980 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 PNMA6FA0A0J9YX94 578 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 PRPF3O43395 683 aaKnown RBP11.25□□□□□ -0.61
ZNF404-203ENST00000588094 CDKL5O76039 1030 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 CTDNEP1O95476 244 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 ICAM1P05362 532 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 STAT3P40763 770 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 SNAP25P60880 206 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 QRICH1Q2TAL8 776 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 Q3C1V9 767 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 CPLX2Q6PUV4 134 aaKnown RBP11.25□□□□□ -0.61
ZNF404-203ENST00000588094 RIOX2Q8IUF8 465 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 CCDC82Q8N4S0 544 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 RRP36Q96EU6 259 aaKnown RBP11.25□□□□□ -0.61
ZNF404-203ENST00000588094 PIGSQ96S52 555 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 LLPHQ9BRT6 129 aaKnown RBP11.25□□□□□ -0.61
ZNF404-203ENST00000588094 PAGR1Q9BTK6 254 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 TEX13BQ9BXU2 312 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 RNF26Q9BY78 433 aaPredicted RBP11.25□□□□□ -0.61
ZNF404-203ENST00000588094 SPATC1LQ9H0A9 340 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 RBM27Q9P2N5 1060 aaKnown RBP11.25□□□□□ -0.61
ZNF404-203ENST00000588094 CTDP1Q9Y5B0 961 aaPredicted RBP11.25□□□□□ -0.61
ZNF404-203ENST00000588094 ZNF236Q9UL36 1845 aa11.25□□□□□ -0.61
ZNF404-203ENST00000588094 PEX10O60683 326 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 PPP1R11O60927 126 aaPredicted RBP11.24□□□□□ -0.61
ZNF404-203ENST00000588094 FMNL1O95466 1100 aaPredicted RBP11.24□□□□□ -0.61
ZNF404-203ENST00000588094 COPB2P35606 906 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 CCNA1P78396 465 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 TRAF1Q13077 416 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 PLS1Q14651 629 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 SNRNP48Q6IEG0 339 aaKnown RBP11.24□□□□□ -0.61
ZNF404-203ENST00000588094 CCDC174Q6PII3 467 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 FBXO11Q86XK2 927 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 CCDC83Q8IWF9 413 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 TRIM22Q8IYM9 498 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 CPXCR1Q8N123 301 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 PHKBQ93100 1093 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 AGBL1Q96MI9 1066 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 AMNQ9BXJ7 453 aa11.24□□□□□ -0.61
ZNF404-203ENST00000588094 MOV10L1Q9BXT6 1211 aaKnown RBP11.24□□□□□ -0.61
ZNF404-203ENST00000588094 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
ZNF404-203ENST00000588094 SEC63Q9UGP8 760 aaKnown RBP11.24□□□□□ -0.61
ZNF404-203ENST00000588094 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
ZNF404-203ENST00000588094 K7ELQ4 463 aaPredicted RBP11.23□□□□□ -0.61
ZNF404-203ENST00000588094 GPR25O00155 361 aa11.23□□□□□ -0.61
ZNF404-203ENST00000588094 SLC25A27O95847 323 aa11.23□□□□□ -0.61
ZNF404-203ENST00000588094 SSRP1Q08945 709 aaKnown RBP11.23□□□□□ -0.61
ZNF404-203ENST00000588094 CUL4AQ13619 759 aa11.23□□□□□ -0.61
ZNF404-203ENST00000588094 PKN1Q16512 942 aa11.23□□□□□ -0.61
ZNF404-203ENST00000588094 TKFCQ3LXA3 575 aa11.23□□□□□ -0.61
ZNF404-203ENST00000588094 HOMER1Q86YM7 354 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms