RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 CCDC73Q6ZRK6 1079 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 USP50Q70EL3 339 aaPredicted RBP6.64□□□□□ -1.35
SDF2-206ENST00000587788 PNMA8AQ86V59 439 aaPredicted RBP6.64□□□□□ -1.35
SDF2-206ENST00000587788 MAGEB6Q8N7X4 407 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 RNF214Q8ND24 703 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 BICD2Q8TD16 824 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 KCNG4Q8TDN1 519 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 STK32AQ8WU08 396 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 WASF1Q92558 559 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 DPF2Q92785 391 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 DDX11Q96FC9 970 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 NOL10Q9BSC4 688 aaKnown RBP6.64□□□□□ -1.35
SDF2-206ENST00000587788 RNF41Q9H4P4 317 aaPredicted RBP6.64□□□□□ -1.35
SDF2-206ENST00000587788 DACT1Q9NYF0 836 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 RTEL1Q9NZ71 1219 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 NAP1L2Q9ULW6 460 aaPredicted RBP6.64□□□□□ -1.35
SDF2-206ENST00000587788 ANGEL1Q9UNK9 670 aaKnown RBP6.64□□□□□ -1.35
SDF2-206ENST00000587788 IQSEC3Q9UPP2 1182 aaPredicted RBP6.64□□□□□ -1.35
SDF2-206ENST00000587788 DOLKQ9UPQ8 538 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 FAM205AQ6ZU69 1335 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 PASKQ96RG2 1323 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 ZNF532Q9HCE3 1301 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 THSD7BQ9C0I4 1608 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 PAPPA2Q9BXP8 1791 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 FOCADQ5VW36 1801 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 MYH7P12883 1935 aa6.64□□□□□ -1.35
SDF2-206ENST00000587788 CCDC196A0A1B0GTZ2 297 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 GOLGA8BA8MQT2 603 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 FOXP2O15409 715 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 KINO60870 393 aaKnown RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 DKK1O94907 266 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 YEATS4O95619 227 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 ADCY5O95622 1261 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 CHGBP05060 677 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 APPP05067 770 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 LAMB1P07942 1786 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 TPM2P07951 284 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 LIG1P18858 919 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 RPS12P25398 132 aaKnown RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 ADD1P35611 737 aaKnown RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 ZNF280AP59817 542 aaPredicted RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 CLDN10P78369 228 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 CCT2P78371 535 aaKnown RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 HDLBPQ00341 1268 aaKnown RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 TYRO3Q06418 890 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 KIF4BQ2VIQ3 1234 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 TMEM164Q5U3C3 297 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 STRIP1Q5VSL9 837 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 SGMS1Q86VZ5 419 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 KIAA0825Q8IV33 1275 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 AGBL3Q8NEM8 1001 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 FBXO18Q8NFZ0 1043 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 NSUN4Q96CB9 384 aaKnown RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 C8orf76Q96K31 380 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 CDK15Q96Q40 435 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 LRRC2Q9BYS8 371 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 GLIS2Q9BZE0 524 aaPredicted RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 NAT10Q9H0A0 1025 aaKnown RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 ATP8A2Q9NTI2 1148 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 ORC3Q9UBD5 711 aaPredicted RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 NOVA2Q9UNW9 492 aaKnown RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 SCAF8Q9UPN6 1271 aaKnown RBP6.63□□□□□ -1.35
SDF2-206ENST00000587788 PCDHAC2Q9Y5I4 1007 aa6.63□□□□□ -1.35
SDF2-206ENST00000587788 CEP350Q5VT06 3117 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 STK36Q9NRP7 1315 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 ERICH2A1L162 156 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 ADM5C9JUS6 153 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 H7C1D1 291 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 SH2B2O14492 632 aaPredicted RBP6.62□□□□□ -1.35
SDF2-206ENST00000587788 SIAH2O43255 324 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 SLC3A2P08195 630 aaKnown RBP6.62□□□□□ -1.35
SDF2-206ENST00000587788 METAP2P50579 478 aaKnown RBP eCLIP6.62□□□□□ -1.35
SDF2-206ENST00000587788 ANTXR2P58335 489 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 HAND2P61296 217 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 MECOMQ03112 1051 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 FAM160A1Q05DH4 1040 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 CHAF1AQ13111 956 aaPredicted RBP6.62□□□□□ -1.35
SDF2-206ENST00000587788 COL9A3Q14050 684 aaPredicted RBP6.62□□□□□ -1.35
SDF2-206ENST00000587788 TRIM29Q14134 588 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 DHX8Q14562 1220 aaKnown RBP6.62□□□□□ -1.35
SDF2-206ENST00000587788 NBPF9Q3BBW0 867 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 INTS6LQ5JSJ4 861 aaKnown RBP6.62□□□□□ -1.35
SDF2-206ENST00000587788 ADALQ6DHV7 355 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 HHIPL2Q6UWX4 724 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 PI16Q6UXB8 463 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 TRIM50Q86XT4 487 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 DZIP1Q86YF9 867 aaKnown RBP6.62□□□□□ -1.35
SDF2-206ENST00000587788 CCAR1Q8IX12 1150 aaKnown RBP6.62□□□□□ -1.35
SDF2-206ENST00000587788 IFNL3Q8IZI9 196 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 SIX5Q8N196 739 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 JMYQ8N9B5 988 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 STAG1Q8WVM7 1258 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 PGBD1Q96JS3 809 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 KCTD15Q96SI1 283 aaPredicted RBP6.62□□□□□ -1.35
SDF2-206ENST00000587788 CRNKL1Q9BZJ0 848 aaKnown RBP6.62□□□□□ -1.35
SDF2-206ENST00000587788 NAPBQ9H115 298 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 NCOA5Q9HCD5 579 aaKnown RBP6.62□□□□□ -1.35
SDF2-206ENST00000587788 MYOZ2Q9NPC6 264 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 GGA3Q9NZ52 723 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms