RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 PATL2C9JE40 543 aaKnown RBP18.03■□□□□ 0.48
HDAC5-206ENST00000587776 ASGR1P07306 291 aa18.03■□□□□ 0.48
HDAC5-206ENST00000587776 BMP3P12645 472 aa18.03■□□□□ 0.48
HDAC5-206ENST00000587776 CST5P28325 142 aaPredicted RBP18.03■□□□□ 0.48
HDAC5-206ENST00000587776 OAZ1P54368 228 aa18.03■□□□□ 0.48
HDAC5-206ENST00000587776 SLFN13Q68D06 897 aa18.03■□□□□ 0.48
HDAC5-206ENST00000587776 ARMCX2Q7L311 632 aa18.03■□□□□ 0.48
HDAC5-206ENST00000587776 IFNL3Q8IZI9 196 aa18.03■□□□□ 0.48
HDAC5-206ENST00000587776 GMCL1P1Q8NEA9 526 aa18.03■□□□□ 0.48
HDAC5-206ENST00000587776 NAPBQ9H115 298 aa18.03■□□□□ 0.48
HDAC5-206ENST00000587776 SYNPO2Q9UMS6 1093 aa18.03■□□□□ 0.48
HDAC5-206ENST00000587776 PLIN4Q96Q06 1357 aa18.03■□□□□ 0.48
HDAC5-206ENST00000587776 ELP1O95163 1332 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 A0A0U1RQG5 324 aaPredicted RBP18.02■□□□□ 0.48
HDAC5-206ENST00000587776 TMEM232C9JQI7 657 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 TIMP1P01033 207 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 STAT2P52630 851 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 GNASQ5JWF2 1037 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 CCDC174Q6PII3 467 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 NOL8Q76FK4 1167 aaKnown RBP18.02■□□□□ 0.48
HDAC5-206ENST00000587776 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.02■□□□□ 0.48
HDAC5-206ENST00000587776 CCDC144CPQ8IYA2 1237 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 MKL1Q969V6 931 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 CHMP4CQ96CF2 233 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 FSD1Q9BTV5 496 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 DCTPP1Q9H773 170 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 ACAD9Q9H845 621 aa18.02■□□□□ 0.48
HDAC5-206ENST00000587776 GBF1Q92538 1859 aa18.01■□□□□ 0.47
HDAC5-206ENST00000587776 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.01■□□□□ 0.47
HDAC5-206ENST00000587776 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.01■□□□□ 0.47
HDAC5-206ENST00000587776 ERC2O15083 957 aa18.01■□□□□ 0.47
HDAC5-206ENST00000587776 TLR3O15455 904 aaKnown RBP18.01■□□□□ 0.47
HDAC5-206ENST00000587776 ADCY6O43306 1168 aa18.01■□□□□ 0.47
HDAC5-206ENST00000587776 FDX1P10109 184 aa18.01■□□□□ 0.47
HDAC5-206ENST00000587776 DNAJB2P25686 324 aa18.01■□□□□ 0.47
HDAC5-206ENST00000587776 IRX5P78411 483 aaPredicted RBP18.01■□□□□ 0.47
HDAC5-206ENST00000587776 PPIGQ13427 754 aaKnown RBP eCLIP18.01■□□□□ 0.472e-6■■□□□ 14.2
HDAC5-206ENST00000587776 CCSAPQ6IQ19 270 aaPredicted RBP18.01■□□□□ 0.47
HDAC5-206ENST00000587776 NEDD1Q8NHV4 660 aa18.01■□□□□ 0.47
HDAC5-206ENST00000587776 UPF3AQ9H1J1 476 aaKnown RBP18.01■□□□□ 0.47
HDAC5-206ENST00000587776 SLC1A4P43007 532 aa18■□□□□ 0.47
HDAC5-206ENST00000587776 GJA9P57773 515 aa18■□□□□ 0.47
HDAC5-206ENST00000587776 TFAP4Q01664 338 aa18■□□□□ 0.47
HDAC5-206ENST00000587776 CNTN2Q02246 1040 aa18■□□□□ 0.47
HDAC5-206ENST00000587776 MFSD5Q6N075 450 aa18■□□□□ 0.47
HDAC5-206ENST00000587776 CCDC129Q6ZRS4 1044 aa18■□□□□ 0.47
HDAC5-206ENST00000587776 FAM160B2Q86V87 743 aa18■□□□□ 0.47
HDAC5-206ENST00000587776 CHURC1Q8WUH1 139 aa18■□□□□ 0.47
HDAC5-206ENST00000587776 FGD4Q96M96 766 aa18■□□□□ 0.47
HDAC5-206ENST00000587776 BUD13Q9BRD0 619 aaKnown RBP eCLIP18■□□□□ 0.475e-8■■■□□ 16.5
HDAC5-206ENST00000587776 RNF146Q9NTX7 359 aa18■□□□□ 0.47
HDAC5-206ENST00000587776 TBX21Q9UL17 535 aa18■□□□□ 0.47
HDAC5-206ENST00000587776 TTC41PQ6P2S7 1318 aa17.99■□□□□ 0.47
HDAC5-206ENST00000587776 ARVCFO00192 962 aa17.99■□□□□ 0.47
HDAC5-206ENST00000587776 PPARAQ07869 468 aa17.99■□□□□ 0.47
HDAC5-206ENST00000587776 PPP4R3BQ5MIZ7 849 aa17.99■□□□□ 0.47
HDAC5-206ENST00000587776 TMEM199Q8N511 208 aa17.99■□□□□ 0.47
HDAC5-206ENST00000587776 SEC62Q99442 399 aaKnown RBP17.99■□□□□ 0.47
HDAC5-206ENST00000587776 PPP1R12CQ9BZL4 782 aa17.99■□□□□ 0.47
HDAC5-206ENST00000587776 LCTP09848 1927 aa17.99■□□□□ 0.47
HDAC5-206ENST00000587776 ASB14A6NK59 587 aa17.98■□□□□ 0.47
HDAC5-206ENST00000587776 ALAS1P13196 640 aa17.98■□□□□ 0.47
HDAC5-206ENST00000587776 BEX3Q00994 111 aa17.98■□□□□ 0.47
HDAC5-206ENST00000587776 TNFAIP2Q03169 654 aa17.98■□□□□ 0.47
HDAC5-206ENST00000587776 TIFAQ96CG3 184 aa17.98■□□□□ 0.47
HDAC5-206ENST00000587776 AGBL1Q96MI9 1066 aa17.98■□□□□ 0.47
HDAC5-206ENST00000587776 STX8Q9UNK0 236 aa17.98■□□□□ 0.47
HDAC5-206ENST00000587776 EYSQ5T1H1 3165 aa17.98■□□□□ 0.47
HDAC5-206ENST00000587776 TSPY2A6NKD2 308 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 CSF2RAP15509 400 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 MCCP23508 829 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 CDK7P50613 346 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 GRIN2CQ14957 1233 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 TKFCQ3LXA3 575 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 TLK2Q86UE8 772 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 FAM126BQ8IXS8 530 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 STAG1Q8WVM7 1258 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 GMCL1Q96IK5 515 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 TRERF1Q96PN7 1200 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 AP5M1Q9H0R1 490 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 ZNF576Q9H609 170 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 A1CFQ9NQ94 594 aaKnown RBP17.97■□□□□ 0.47
HDAC5-206ENST00000587776 MTMR7Q9Y216 660 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 MYO9BQ13459 2157 aa17.97■□□□□ 0.47
HDAC5-206ENST00000587776 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.96■□□□□ 0.47
HDAC5-206ENST00000587776 ACRP10323 421 aa17.96■□□□□ 0.47
HDAC5-206ENST00000587776 TMEM240Q5SV17 173 aa17.96■□□□□ 0.47
HDAC5-206ENST00000587776 PSRC1Q6PGN9 363 aaPredicted RBP17.96■□□□□ 0.47
HDAC5-206ENST00000587776 KCTD1Q719H9 257 aa17.96■□□□□ 0.47
HDAC5-206ENST00000587776 FAM133AQ8N9E0 248 aa17.96■□□□□ 0.47
HDAC5-206ENST00000587776 GAS2L1Q99501 681 aaPredicted RBP17.96■□□□□ 0.47
HDAC5-206ENST00000587776 CDH23Q9H251 3354 aa17.95■□□□□ 0.46
HDAC5-206ENST00000587776 ZEB2O60315 1214 aa17.95■□□□□ 0.46
HDAC5-206ENST00000587776 CTDSPL2Q05D32 466 aa17.95■□□□□ 0.46
HDAC5-206ENST00000587776 CCDC96Q2M329 555 aa17.95■□□□□ 0.46
HDAC5-206ENST00000587776 ZMYM1Q5SVZ6 1142 aa17.95■□□□□ 0.46
HDAC5-206ENST00000587776 PI4K2BQ8TCG2 481 aa17.95■□□□□ 0.46
HDAC5-206ENST00000587776 SYMPKQ92797 1274 aaKnown RBP17.95■□□□□ 0.46
HDAC5-206ENST00000587776 KATNBL1Q9H079 304 aa17.95■□□□□ 0.46
HDAC5-206ENST00000587776 ZBTB47Q9UFB7 747 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms