RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 MECOMQ03112 1051 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 MEA1Q16626 185 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 AMOTL1Q8IY63 956 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 GIMAP8Q8ND71 665 aaPredicted RBP20.85■□□□□ 0.93
DDX39A-206ENST00000587730 RASSF8Q8NHQ8 419 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 SLF1Q9BQI6 1058 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 A0A1B0GUL6 1792 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 ANO9A1A5B4 782 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 IVLP07476 585 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 CDK17Q00537 523 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 TRAPPC11Q7Z392 1133 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 ZNF507Q8TCN5 953 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 STAMQ92783 540 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 KBTBD4Q9NVX7 518 aa20.85■□□□□ 0.93
DDX39A-206ENST00000587730 SRGNP10124 158 aa20.84■□□□□ 0.93
DDX39A-206ENST00000587730 GRM4Q14833 912 aa20.84■□□□□ 0.93
DDX39A-206ENST00000587730 FIGNQ5HY92 759 aa20.84■□□□□ 0.93
DDX39A-206ENST00000587730 CERS3Q8IU89 383 aa20.84■□□□□ 0.93
DDX39A-206ENST00000587730 TRIM47Q96LD4 638 aa20.84■□□□□ 0.93
DDX39A-206ENST00000587730 PNKPQ96T60 521 aa20.84■□□□□ 0.93
DDX39A-206ENST00000587730 TSGA10Q9BZW7 698 aa20.84■□□□□ 0.93
DDX39A-206ENST00000587730 TCP11L1Q9NUJ3 509 aa20.84■□□□□ 0.93
DDX39A-206ENST00000587730 TRPC5Q9UL62 973 aaPredicted RBP20.84■□□□□ 0.93
DDX39A-206ENST00000587730 HIBADHP31937 336 aaKnown RBP20.83■□□□□ 0.93
DDX39A-206ENST00000587730 SLC20A2Q08357 652 aa20.83■□□□□ 0.93
DDX39A-206ENST00000587730 DDB1Q16531 1140 aa20.83■□□□□ 0.93
DDX39A-206ENST00000587730 COBLL1Q53SF7 1204 aa20.83■□□□□ 0.93
DDX39A-206ENST00000587730 NOM1Q5C9Z4 860 aaKnown RBP20.83■□□□□ 0.93
DDX39A-206ENST00000587730 PAPD7Q5XG87 772 aaKnown RBP20.83■□□□□ 0.93
DDX39A-206ENST00000587730 LEKR1Q6ZMV7 388 aa20.83■□□□□ 0.93
DDX39A-206ENST00000587730 HOMEZQ8IX15 550 aa20.83■□□□□ 0.93
DDX39A-206ENST00000587730 RUBCNQ92622 972 aa20.83■□□□□ 0.93
DDX39A-206ENST00000587730 NYXQ9GZU5 481 aa20.83■□□□□ 0.93
DDX39A-206ENST00000587730 ABCB6Q9NP58 842 aa20.83■□□□□ 0.93
DDX39A-206ENST00000587730 ROBO3Q96MS0 1386 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 A0A1W2PQJ5 194 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 TTC26A0AVF1 554 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 M0R2N6 131 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 ST5P78524 1137 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 AMPD3Q01432 767 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 MCM6Q14566 821 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 ZSCAN26Q16670 478 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 FAM98CQ17RN3 349 aaKnown RBP20.83■□□□□ 0.92
DDX39A-206ENST00000587730 RCSD1Q6JBY9 416 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 IRF2BP1Q8IU81 584 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 ZNF384Q8TF68 577 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 GJD4Q96KN9 370 aaPredicted RBP20.83■□□□□ 0.92
DDX39A-206ENST00000587730 PDE11AQ9HCR9 933 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 EXOC1Q9NV70 894 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 GDAQ9Y2T3 454 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 SAR1BQ9Y6B6 198 aa20.83■□□□□ 0.92
DDX39A-206ENST00000587730 H3BQF6 201 aa20.82■□□□□ 0.92
DDX39A-206ENST00000587730 RPS6KA5O75582 802 aa20.82■□□□□ 0.92
DDX39A-206ENST00000587730 ZBED6P86452 979 aa20.82■□□□□ 0.92
DDX39A-206ENST00000587730 CASP8Q14790 479 aa20.82■□□□□ 0.92
DDX39A-206ENST00000587730 PNMA1Q8ND90 353 aa20.82■□□□□ 0.92
DDX39A-206ENST00000587730 ZNF287Q9HBT7 754 aa20.82■□□□□ 0.92
DDX39A-206ENST00000587730 ZCCHC17Q9NP64 241 aaKnown RBP20.82■□□□□ 0.92
DDX39A-206ENST00000587730 ZNF831Q5JPB2 1677 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 EIF3CLB5ME19 914 aaKnown RBP20.81■□□□□ 0.92
DDX39A-206ENST00000587730 ACTN2P35609 894 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 VSNL1P62760 191 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 ITPK1Q13572 414 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 ERFEQ4G0M1 354 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 CCDC70Q6NSX1 233 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 KRT25Q7Z3Z0 450 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 NEK11Q8NG66 645 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 UPF1Q92900 1129 aaKnown RBP eCLIP20.81■□□□□ 0.92
DDX39A-206ENST00000587730 EIF3CQ99613 913 aaKnown RBP20.81■□□□□ 0.92
DDX39A-206ENST00000587730 RHOXF2BP0C7M4 288 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 CCNE1P24864 410 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 USP14P54578 494 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 NAALADL2Q58DX5 795 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 FAM47AQ5JRC9 791 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 CCDC122Q5T0U0 273 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 TTI2Q6NXR4 508 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 KIAA1328Q86T90 577 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 RHOXF2Q9BQY4 288 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 BARHL2Q9NY43 387 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 GUCA1BQ9UMX6 200 aa20.81■□□□□ 0.92
DDX39A-206ENST00000587730 BAZ2AQ9UIF9 1905 aaKnown RBP20.8■□□□□ 0.92
DDX39A-206ENST00000587730 A0A0U1RQJ8 604 aa20.8■□□□□ 0.92
DDX39A-206ENST00000587730 SMIM22K7EJ46 135 aa20.8■□□□□ 0.92
DDX39A-206ENST00000587730 KLRC4O43908 158 aa20.8■□□□□ 0.92
DDX39A-206ENST00000587730 LMAN1P49257 510 aa20.8■□□□□ 0.92
DDX39A-206ENST00000587730 AARSP49588 968 aaKnown RBP eCLIP20.8■□□□□ 0.92
DDX39A-206ENST00000587730 GSTO1P78417 241 aa20.8■□□□□ 0.92
DDX39A-206ENST00000587730 GOLGA6L1Q8N7Z2 621 aa20.8■□□□□ 0.92
DDX39A-206ENST00000587730 ATRIPQ8WXE1 791 aa20.8■□□□□ 0.92
DDX39A-206ENST00000587730 REXO2Q9Y3B8 237 aaKnown RBP20.8■□□□□ 0.92
DDX39A-206ENST00000587730 KIAA1551Q9HCM1 1747 aa20.79■□□□□ 0.92
DDX39A-206ENST00000587730 NMT2O60551 498 aa20.79■□□□□ 0.92
DDX39A-206ENST00000587730 RPS8P62241 208 aaKnown RBP20.79■□□□□ 0.92
DDX39A-206ENST00000587730 C12orf60Q5U649 245 aa20.79■□□□□ 0.92
DDX39A-206ENST00000587730 CSGALNACT2Q8N6G5 542 aa20.79■□□□□ 0.92
DDX39A-206ENST00000587730 P2RX5Q93086 422 aa20.79■□□□□ 0.92
DDX39A-206ENST00000587730 JAKMIP2Q96AA8 810 aa20.79■□□□□ 0.92
DDX39A-206ENST00000587730 TUBGCP2Q9BSJ2 902 aa20.79■□□□□ 0.92
DDX39A-206ENST00000587730 VPS18Q9P253 973 aa20.79■□□□□ 0.92
DDX39A-206ENST00000587730 PCDHA6Q9UN73 950 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms