RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 GJA5P36382 358 aa11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 GCLCP48506 637 aaPredicted RBP11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 CDC37Q16543 378 aaPredicted RBP11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 CCL15Q16663 113 aa11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 TKFCQ3LXA3 575 aa11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 KIAA1755Q5JYT7 1200 aa11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 IFFO2Q5TF58 517 aa11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 FBXO18Q8NFZ0 1043 aa11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 PARK7Q99497 189 aaKnown RBP11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 NUP88Q99567 741 aaPredicted RBP11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 ALG1Q9BT22 464 aa11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 UBA5Q9GZZ9 404 aa11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 SLC38A10Q9HBR0 1119 aa11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 MAP3K20Q9NYL2 800 aaKnown RBP11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 CHMP5Q9NZZ3 219 aa11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 ATP6V1DQ9Y5K8 247 aa11.93□□□□□ -0.5
CLPTM1-207ENST00000587537 ABCB11O95342 1321 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 A0A0G2JMZ2 1700 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 RLFQ13129 1914 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 VWA5AO00534 786 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 STX6O43752 255 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 JAK2O60674 1132 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 ICAM1P05362 532 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 FDPSP14324 419 aaKnown RBP11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 MOGSQ13724 837 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 DEFB115Q30KQ5 88 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 TTBK2Q6IQ55 1244 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 FBXO11Q86XK2 927 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 CCDC82Q8N4S0 544 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 KIFC2Q96AC6 838 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 DDX11Q96FC9 970 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 PIGSQ96S52 555 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 C6orf50Q9HD87 102 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 MRPL11Q9Y3B7 192 aaKnown RBP11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 RABGAP1Q9Y3P9 1069 aa11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 BAZ2BQ9UIF8 2168 aaKnown RBP11.92□□□□□ -0.5
CLPTM1-207ENST00000587537 SYT1P21579 422 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 DDIT3P35638 169 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 SLC16A2P36021 539 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 MAP2K2P36507 400 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 TM4SF4P48230 202 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 MRPL12P52815 198 aaKnown RBP11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 PKN1Q16512 942 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 QRICH1Q2TAL8 776 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 GPAT2Q6NUI2 795 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 HOMER1Q86YM7 354 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 MCF2L2Q86YR7 1114 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 DAGLBQ8NCG7 672 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 TEX13BQ9BXU2 312 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 ASCC2Q9H1I8 757 aaPredicted RBP11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 ZSCAN16Q9H4T2 348 aaPredicted RBP11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 VAT1LQ9HCJ6 419 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 FBXO40Q9UH90 709 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 PCDHA1Q9Y5I3 950 aa11.91□□□□□ -0.5
CLPTM1-207ENST00000587537 SPDYE16A6NNV3 312 aaPredicted RBP11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 FAM155AB1AL88 458 aaPredicted RBP11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 PDHXO00330 501 aa11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 SLC25A27O95847 323 aa11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 NAPAP54920 295 aa11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 HERVK_113P62684 666 aa11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 CCNA1P78396 465 aa11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 TREML2Q5T2D2 321 aa11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 HEATR3Q7Z4Q2 680 aa11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 BRAPQ7Z569 592 aa11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 CMTR1Q8N1G2 835 aaKnown RBP11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 SMCR8Q8TEV9 937 aaPredicted RBP11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 BRI3BPQ8WY22 251 aa11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 CUL5Q93034 780 aa11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 ZMYND12Q9H0C1 365 aa11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 FOXP1Q9H334 677 aaPredicted RBP11.9□□□□□ -0.5
CLPTM1-207ENST00000587537 BTBD19C9JJ37 291 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 STXBP3O00186 592 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 FOSP01100 380 aaPredicted RBP11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 MMP1P03956 469 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 NLRP5P59047 1200 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 GNL2Q13823 731 aaKnown RBP11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 SLC35G1Q2M3R5 365 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 KRT40Q6A162 431 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 WWC2Q6AWC2 1192 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 ATL3Q6DD88 541 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 RASGRP2Q7LDG7 609 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 SHCBP1Q8NEM2 672 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 CHST13Q8NET6 341 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 PHF20Q9BVI0 1012 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 FBXO28Q9NVF7 368 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 CCPG1Q9ULG6 757 aa11.89□□□□□ -0.51
CLPTM1-207ENST00000587537 RBBP6Q7Z6E9 1792 aaKnown RBP11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 PIK3CDO00329 1044 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 BRD1O95696 1058 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 ZSCAN22P10073 491 aaPredicted RBP11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 KRT2P35908 639 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 ADCY7P51828 1080 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 GHRHRQ02643 423 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 AP3B2Q13367 1082 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 PAXIP1Q6ZW49 1069 aaPredicted RBP11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 REPS2Q8NFH8 660 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms