RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 ZNF536O15090 1300 aa18.04■□□□□ 0.48
PRKCSH-204ENST00000587290 MAMDC4Q6UXC1 1216 aa18.04■□□□□ 0.48
PRKCSH-204ENST00000587290 FAM184BQ9ULE4 1060 aa18.04■□□□□ 0.48
PRKCSH-204ENST00000587290 STXBP5LQ9Y2K9 1186 aa18.04■□□□□ 0.48
PRKCSH-204ENST00000587290 A0A0D9SFI3 127 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 TSPY2A6NKD2 308 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 POTEB2H3BUK9 544 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 SLC3A2P08195 630 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 CLTBP09497 229 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 SLC1A4P43007 532 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 STAT2P52630 851 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 ACLYP53396 1101 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 ACVR2BQ13705 512 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 KCNA10Q16322 511 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 C1orf53Q5VUE5 145 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 CCDC174Q6PII3 467 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 ARMCX2Q7L311 632 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 CCDC144CPQ8IYA2 1237 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 KLHDC9Q8NEP7 349 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 FAM227BQ96M60 508 aa18.03■□□□□ 0.48
PRKCSH-204ENST00000587290 DLL1O00548 723 aa18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 C6orf222P0C671 652 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 CCDC144BQ3MJ40 725 aa18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 CCSAPQ6IQ19 270 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 MSL3Q8N5Y2 521 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 CHST13Q8NET6 341 aa18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 GMCL1Q96IK5 515 aa18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 KATNBL1Q9H079 304 aa18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 A1CFQ9NQ94 594 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 STARD7Q9NQZ5 370 aa18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 RNF146Q9NTX7 359 aa18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 SYNPO2Q9UMS6 1093 aa18.02■□□□□ 0.48
PRKCSH-204ENST00000587290 CUL9Q8IWT3 2517 aa18.02■□□□□ 0.47
PRKCSH-204ENST00000587290 ASTN1O14525 1302 aa18.01■□□□□ 0.47
PRKCSH-204ENST00000587290 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.01■□□□□ 0.47
PRKCSH-204ENST00000587290 RANBP6O60518 1105 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-204ENST00000587290 ALAS1P13196 640 aa18.01■□□□□ 0.47
PRKCSH-204ENST00000587290 PDE1AP54750 535 aa18.01■□□□□ 0.47
PRKCSH-204ENST00000587290 FAAP100Q0VG06 881 aa18.01■□□□□ 0.47
PRKCSH-204ENST00000587290 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.01■□□□□ 0.47
PRKCSH-204ENST00000587290 ZNF467Q7Z7K2 595 aaPredicted RBP18.01■□□□□ 0.47
PRKCSH-204ENST00000587290 PURBQ96QR8 312 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-204ENST00000587290 ACAD9Q9H845 621 aa18.01■□□□□ 0.47
PRKCSH-204ENST00000587290 PRUNE2Q8WUY3 3088 aa18.01■□□□□ 0.47
PRKCSH-204ENST00000587290 SOWAHBA6NEL2 793 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 DUSP11O75319 330 aaKnown RBP18■□□□□ 0.47
PRKCSH-204ENST00000587290 RAG1P15918 1043 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 OAZ1P54368 228 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 MUM1L1Q5H9M0 696 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 RRP12Q5JTH9 1297 aaKnown RBP18■□□□□ 0.47
PRKCSH-204ENST00000587290 ZNF589Q86UQ0 364 aaPredicted RBP18■□□□□ 0.47
PRKCSH-204ENST00000587290 FAM133AQ8N9E0 248 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 STAG1Q8WVM7 1258 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 EVI5LQ96CN4 794 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 TRERF1Q96PN7 1200 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 ABHD16BQ9H3Z7 469 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 TOMM22Q9NS69 142 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 TMEM39AQ9NV64 488 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 ZBTB47Q9UFB7 747 aaPredicted RBP18■□□□□ 0.47
PRKCSH-204ENST00000587290 FBXO40Q9UH90 709 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 PRR12Q9ULL5 1215 aa18■□□□□ 0.47
PRKCSH-204ENST00000587290 KIAA0355O15063 1070 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 ASGR1P07306 291 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 SLC16A2P36021 539 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 HAND2P61296 217 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 BEX3Q00994 111 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 CCDC96Q2M329 555 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 ZNF697Q5TEC3 545 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 TTBK2Q6IQ55 1244 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 FAM160B2Q86V87 743 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 CHURC1Q8WUH1 139 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 TSEN34Q9BSV6 310 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 LNPKQ9C0E8 428 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 VCANP13611 3396 aa17.99■□□□□ 0.47
PRKCSH-204ENST00000587290 FRMPD2Q68DX3 1309 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 CTAGE5O15320 804 aa17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 NMIQ13287 307 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 TMEM63BQ5T3F8 832 aa17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 FAM109BQ6ICB4 259 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 RCSD1Q6JBY9 416 aa17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 NUP133Q8WUM0 1156 aa17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 RNPC3Q96LT9 517 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 UPF3AQ9H1J1 476 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 ANAPC4Q9UJX5 808 aa17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 LAMA4Q16363 1823 aa17.98■□□□□ 0.47
PRKCSH-204ENST00000587290 MOXD2PA6NHM9 499 aa17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 FGAP02671 866 aa17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 CST5P28325 142 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 HDAC1Q13547 482 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 GNASQ5JWF2 1037 aa17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 B4GALNT3Q6L9W6 998 aa17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 EEPD1Q7L9B9 569 aa17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 ANKRD33Q7Z3H0 272 aa17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 VTI1AQ96AJ9 217 aa17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 TTYH1Q9H313 450 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 HELLSQ9NRZ9 838 aa17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 CCPG1Q9ULG6 757 aa17.97■□□□□ 0.47
PRKCSH-204ENST00000587290 DCDC2CA8MYV0 355 aa17.96■□□□□ 0.47
PRKCSH-204ENST00000587290 ORC4O43929 436 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms