RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 PLA2G6O60733 806 aa17.23■□□□□ 0.35
NFIX-208ENST00000587260 CYP2C8P10632 490 aa17.23■□□□□ 0.35
NFIX-208ENST00000587260 TAL1P17542 331 aaPredicted RBP17.23■□□□□ 0.35
NFIX-208ENST00000587260 OSBPP22059 807 aa17.23■□□□□ 0.35
NFIX-208ENST00000587260 HOXA7P31268 230 aaPredicted RBP17.23■□□□□ 0.35
NFIX-208ENST00000587260 SREBF2Q12772 1141 aa17.23■□□□□ 0.35
NFIX-208ENST00000587260 NOGQ13253 232 aa17.23■□□□□ 0.35
NFIX-208ENST00000587260 COG2Q14746 738 aa17.23■□□□□ 0.35
NFIX-208ENST00000587260 CCDC174Q6PII3 467 aa17.23■□□□□ 0.35
NFIX-208ENST00000587260 ANKRD23Q86SG2 305 aa17.23■□□□□ 0.35
NFIX-208ENST00000587260 PRPF38AQ8NAV1 312 aaKnown RBP17.23■□□□□ 0.35
NFIX-208ENST00000587260 FBXO18Q8NFZ0 1043 aa17.23■□□□□ 0.35
NFIX-208ENST00000587260 ALG1Q9BT22 464 aa17.23■□□□□ 0.35
NFIX-208ENST00000587260 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
NFIX-208ENST00000587260 RBBP6Q7Z6E9 1792 aaKnown RBP17.22■□□□□ 0.35
NFIX-208ENST00000587260 TESPA1A2RU30 521 aaPredicted RBP17.22■□□□□ 0.35
NFIX-208ENST00000587260 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
NFIX-208ENST00000587260 DSG3P32926 999 aa17.22■□□□□ 0.35
NFIX-208ENST00000587260 PFKFB3Q16875 520 aaPredicted RBP17.22■□□□□ 0.35
NFIX-208ENST00000587260 QRICH1Q2TAL8 776 aa17.22■□□□□ 0.35
NFIX-208ENST00000587260 FAM177A1Q8N128 213 aaPredicted RBP17.22■□□□□ 0.35
NFIX-208ENST00000587260 GPKOWQ92917 476 aaPredicted RBP eCLIP17.22■□□□□ 0.35
NFIX-208ENST00000587260 MTMR8Q96EF0 704 aa17.22■□□□□ 0.35
NFIX-208ENST00000587260 C8orf76Q96K31 380 aa17.22■□□□□ 0.35
NFIX-208ENST00000587260 AIFM3Q96NN9 605 aa17.22■□□□□ 0.35
NFIX-208ENST00000587260 RANBP17Q9H2T7 1088 aaKnown RBP17.22■□□□□ 0.35
NFIX-208ENST00000587260 PNMA3Q9UL41 463 aa17.22■□□□□ 0.35
NFIX-208ENST00000587260 VEGFBP49765 207 aa17.21■□□□□ 0.35
NFIX-208ENST00000587260 HERVK_113P62684 666 aa17.21■□□□□ 0.35
NFIX-208ENST00000587260 IFNL1Q8IU54 200 aa17.21■□□□□ 0.35
NFIX-208ENST00000587260 P2RX7Q99572 595 aaKnown RBP17.21■□□□□ 0.35
NFIX-208ENST00000587260 CTDP1Q9Y5B0 961 aaPredicted RBP17.21■□□□□ 0.35
NFIX-208ENST00000587260 MYPNQ86TC9 1320 aa17.21■□□□□ 0.35
NFIX-208ENST00000587260 H3BQV1 296 aa17.21■□□□□ 0.34
NFIX-208ENST00000587260 VWA5AO00534 786 aa17.21■□□□□ 0.34
NFIX-208ENST00000587260 ZBTB5O15062 677 aa17.21■□□□□ 0.34
NFIX-208ENST00000587260 PEX10O60683 326 aa17.21■□□□□ 0.34
NFIX-208ENST00000587260 PPP1R11O60927 126 aaPredicted RBP17.21■□□□□ 0.34
NFIX-208ENST00000587260 SCG2P13521 617 aa17.21■□□□□ 0.34
NFIX-208ENST00000587260 IFFO2Q5TF58 517 aa17.21■□□□□ 0.34
NFIX-208ENST00000587260 HEATR3Q7Z4Q2 680 aa17.21■□□□□ 0.34
NFIX-208ENST00000587260 SMCR8Q8TEV9 937 aaPredicted RBP17.21■□□□□ 0.34
NFIX-208ENST00000587260 SLC45A1Q9Y2W3 748 aa17.21■□□□□ 0.34
NFIX-208ENST00000587260 SMCHD1A6NHR9 2005 aa17.2■□□□□ 0.34
NFIX-208ENST00000587260 VPS37CA5D8V6 355 aaPredicted RBP17.2■□□□□ 0.34
NFIX-208ENST00000587260 USH1GQ495M9 461 aa17.2■□□□□ 0.34
NFIX-208ENST00000587260 WWC2Q6AWC2 1192 aa17.2■□□□□ 0.34
NFIX-208ENST00000587260 CLEC17AQ6ZS10 378 aa17.2■□□□□ 0.34
NFIX-208ENST00000587260 CPXCR1Q8N123 301 aa17.2■□□□□ 0.34
NFIX-208ENST00000587260 TNPO1Q92973 898 aaKnown RBP17.2■□□□□ 0.34
NFIX-208ENST00000587260 PARK7Q99497 189 aaKnown RBP17.2■□□□□ 0.34
NFIX-208ENST00000587260 PAGR1Q9BTK6 254 aa17.2■□□□□ 0.34
NFIX-208ENST00000587260 SLC38A10Q9HBR0 1119 aa17.2■□□□□ 0.34
NFIX-208ENST00000587260 RAVER2Q9HCJ3 691 aaKnown RBP17.2■□□□□ 0.34
NFIX-208ENST00000587260 SH3GLB2Q9NR46 395 aa17.2■□□□□ 0.34
NFIX-208ENST00000587260 HOXC10Q9NYD6 342 aa17.2■□□□□ 0.34
NFIX-208ENST00000587260 PNMA6FA0A0J9YX94 578 aa17.19■□□□□ 0.34
NFIX-208ENST00000587260 hCG_1984214I3L0E3 225 aa17.19■□□□□ 0.34
NFIX-208ENST00000587260 ZBED4O75132 1171 aa17.19■□□□□ 0.34
NFIX-208ENST00000587260 F13A1P00488 732 aa17.19■□□□□ 0.34
NFIX-208ENST00000587260 XBP1P17861 261 aa17.19■□□□□ 0.34
NFIX-208ENST00000587260 INHBEP58166 350 aa17.19■□□□□ 0.34
NFIX-208ENST00000587260 KRT40Q6A162 431 aa17.19■□□□□ 0.34
NFIX-208ENST00000587260 POTEEQ6S8J3 1075 aa17.19■□□□□ 0.34
NFIX-208ENST00000587260 ZNF713Q8N859 430 aaPredicted RBP17.19■□□□□ 0.34
NFIX-208ENST00000587260 GJB4Q9NTQ9 266 aa17.19■□□□□ 0.34
NFIX-208ENST00000587260 VPS54Q9P1Q0 977 aa17.19■□□□□ 0.34
NFIX-208ENST00000587260 ZNF536O15090 1300 aa17.18■□□□□ 0.34
NFIX-208ENST00000587260 TRIM29Q14134 588 aa17.18■□□□□ 0.34
NFIX-208ENST00000587260 PLS1Q14651 629 aa17.18■□□□□ 0.34
NFIX-208ENST00000587260 TMEM132BQ14DG7 1078 aa17.18■□□□□ 0.34
NFIX-208ENST00000587260 TAF1CQ15572 869 aaPredicted RBP17.18■□□□□ 0.34
NFIX-208ENST00000587260 OTUD7BQ6GQQ9 843 aa17.18■□□□□ 0.34
NFIX-208ENST00000587260 FBXO11Q86XK2 927 aa17.18■□□□□ 0.34
NFIX-208ENST00000587260 REPS2Q8NFH8 660 aa17.18■□□□□ 0.34
NFIX-208ENST00000587260 COA7Q96BR5 231 aa17.18■□□□□ 0.34
NFIX-208ENST00000587260 AGBL1Q96MI9 1066 aa17.18■□□□□ 0.34
NFIX-208ENST00000587260 ZSCAN16Q9H4T2 348 aaPredicted RBP17.18■□□□□ 0.34
NFIX-208ENST00000587260 CCPG1Q9ULG6 757 aa17.18■□□□□ 0.34
NFIX-208ENST00000587260 ADAMTS5Q9UNA0 930 aa17.18■□□□□ 0.34
NFIX-208ENST00000587260 TM4SF4P48230 202 aa17.17■□□□□ 0.34
NFIX-208ENST00000587260 LBX2Q6XYB7 198 aa17.17■□□□□ 0.34
NFIX-208ENST00000587260 SHISA4Q96DD7 197 aa17.17■□□□□ 0.34
NFIX-208ENST00000587260 PHF20Q9BVI0 1012 aa17.17■□□□□ 0.34
NFIX-208ENST00000587260 AMNQ9BXJ7 453 aa17.17■□□□□ 0.34
NFIX-208ENST00000587260 TXNRD2Q9NNW7 524 aa17.17■□□□□ 0.34
NFIX-208ENST00000587260 BARHL2Q9NY43 387 aa17.17■□□□□ 0.34
NFIX-208ENST00000587260 BTBD7Q9P203 1132 aa17.17■□□□□ 0.34
NFIX-208ENST00000587260 ATP6V1DQ9Y5K8 247 aa17.17■□□□□ 0.34
NFIX-208ENST00000587260 STXBP3O00186 592 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 CNMDO75829 334 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 MMP1P03956 469 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 ICAM1P05362 532 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 NAPAP54920 295 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 GUCY1B3Q02153 619 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 SNRNP48Q6IEG0 339 aaKnown RBP17.16■□□□□ 0.34
NFIX-208ENST00000587260 TYW1BQ6NUM6 668 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 ZCCHC17Q9NP64 241 aaKnown RBP17.16■□□□□ 0.34
NFIX-208ENST00000587260 HOMER2Q9NSB8 354 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 ZNF214Q9UL59 606 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms