RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 A0A1W2PQY0 241 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 GRXCR1A8MXD5 290 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 ADCY6O43306 1168 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 STRNO43815 780 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 CLTBP09497 229 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 FCER1AP12319 257 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 ATP5JP18859 108 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 PTGS1P23219 599 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 CHMLP26374 656 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 CDK8P49336 464 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 FAM83BQ5T0W9 1011 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 KIAA1211Q6ZU35 1233 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 SHCBP1Q8NEM2 672 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 PPM1EQ8WY54 764 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 MROH8Q9H579 483 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 RAPGEFL1Q9UHV5 662 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 PHF24Q9UPV7 400 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 TMX2Q9Y320 296 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 STK24Q9Y6E0 443 aa9.26□□□□□ -0.93
VMP1-204ENST00000587259 DDX49Q9Y6V7 483 aaKnown RBP9.26□□□□□ -0.93
VMP1-204ENST00000587259 BAZ2AQ9UIF9 1905 aaKnown RBP9.26□□□□□ -0.93
VMP1-204ENST00000587259 USP17L12C9JPN9 530 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 USP17L21D6R901 530 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 ZNF865P0CJ78 1059 aaPredicted RBP9.25□□□□□ -0.93
VMP1-204ENST00000587259 RARBP10826 455 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 RAG1P15918 1043 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 PBX2P40425 430 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 SMAD3P84022 425 aaKnown RBP9.25□□□□□ -0.93
VMP1-204ENST00000587259 ZNF792Q3KQV3 632 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 CERS3Q8IU89 383 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 TINF2Q9BSI4 451 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.25□□□□□ -0.93
VMP1-204ENST00000587259 USP26Q9BXU7 913 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 ARHGEF10LQ9HCE6 1279 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 TMEM39AQ9NV64 488 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 RIPK3Q9Y572 518 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 PARP14Q460N5 1801 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 TTC28Q96AY4 2481 aa9.25□□□□□ -0.93
VMP1-204ENST00000587259 LAMA4Q16363 1823 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 VWA5AO00534 786 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 WDR46O15213 610 aaKnown RBP9.24□□□□□ -0.93
VMP1-204ENST00000587259 ADAMTS4O75173 837 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 ACRP10323 421 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 ADD2P35612 726 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 STAT3P40763 770 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 MCM2P49736 904 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 FAAP100Q0VG06 881 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 TTF1Q15361 905 aaPredicted RBP9.24□□□□□ -0.93
VMP1-204ENST00000587259 KCNA10Q16322 511 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 C12orf60Q5U649 245 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 TSHZ3Q63HK5 1081 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 CTR9Q6PD62 1173 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 ABRAQ8N0Z2 381 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 MB21D1Q8N884 522 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 REPS2Q8NFH8 660 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 TMEM121BQ9BXQ6 578 aaPredicted RBP9.24□□□□□ -0.93
VMP1-204ENST00000587259 PUS7LQ9H0K6 701 aaKnown RBP9.24□□□□□ -0.93
VMP1-204ENST00000587259 PAG1Q9NWQ8 432 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 SLC5A4Q9NY91 659 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 ZHX1Q9UKY1 873 aaPredicted RBP9.24□□□□□ -0.93
VMP1-204ENST00000587259 ZNF214Q9UL59 606 aaPredicted RBP9.24□□□□□ -0.93
VMP1-204ENST00000587259 ADAMTS5Q9UNA0 930 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 SLC4A4Q9Y6R1 1079 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 ZNFX1Q9P2E3 1918 aaKnown RBP9.24□□□□□ -0.93
VMP1-204ENST00000587259 SYNRGQ9UMZ2 1314 aa9.24□□□□□ -0.93
VMP1-204ENST00000587259 SNAI1O95863 264 aaPredicted RBP9.23□□□□□ -0.93
VMP1-204ENST00000587259 DNAJB2P25686 324 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 ACLYP53396 1101 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 FPGSQ05932 587 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 KCTD2Q14681 263 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 C1orf53Q5VUE5 145 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 C16orf86Q6ZW13 317 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 C16orf59Q7L2K0 433 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 RNF180Q86T96 592 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 RIOX2Q8IUF8 465 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 CPXCR1Q8N123 301 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 IL17RAQ96F46 866 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 HAUS7Q99871 368 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.23□□□□□ -0.93
VMP1-204ENST00000587259 FSD1Q9BTV5 496 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 ANO2Q9NQ90 1003 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 SWAP70Q9UH65 585 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 PPP1R9AQ9ULJ8 1098 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 TACC3Q9Y6A5 838 aa9.23□□□□□ -0.93
VMP1-204ENST00000587259 PLXNA1Q9UIW2 1896 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 STK25O00506 426 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 KIAA0355O15063 1070 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 SGSM2O43147 1006 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 IGSF3O75054 1194 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 PRDM1O75626 825 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 SLC25A27O95847 323 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 AKR1A1P14550 325 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 CSF2RAP15509 400 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 CCDC85BQ15834 202 aaPredicted RBP9.22□□□□□ -0.93
VMP1-204ENST00000587259 RNF20Q5VTR2 975 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 SNRNP48Q6IEG0 339 aaKnown RBP9.22□□□□□ -0.93
VMP1-204ENST00000587259 CCSAPQ6IQ19 270 aaPredicted RBP9.22□□□□□ -0.93
VMP1-204ENST00000587259 FGD4Q96M96 766 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 PPP1R12CQ9BZL4 782 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 PRDM12Q9H4Q4 367 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms