RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 ZNF589Q86UQ0 364 aaPredicted RBP12.58□□□□□ -0.4
ZNF540-205ENST00000587220 ACAD9Q9H845 621 aa12.58□□□□□ -0.4
ZNF540-205ENST00000587220 TSHZ2Q9NRE2 1034 aa12.58□□□□□ -0.4
ZNF540-205ENST00000587220 ZMYM6O95789 1325 aa12.58□□□□□ -0.4
ZNF540-205ENST00000587220 DNAJC25-GNG10A0A024R161 153 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 HIP1O00291 1037 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 PGK1P00558 417 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 PCP11498 1178 aaKnown RBP12.57□□□□□ -0.4
ZNF540-205ENST00000587220 ALAS1P13196 640 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 CCDC174Q6PII3 467 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 CWC27Q6UX04 472 aaKnown RBP12.57□□□□□ -0.4
ZNF540-205ENST00000587220 SLC39A5Q6ZMH5 540 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 PLEKHM2Q8IWE5 1019 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 TDHQ8IZJ6 230 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 DCAF4Q8WV16 495 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 OSBPL3Q9H4L5 887 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 RNF41Q9H4P4 317 aaPredicted RBP12.57□□□□□ -0.4
ZNF540-205ENST00000587220 PRDM5Q9NQX1 630 aaPredicted RBP12.57□□□□□ -0.4
ZNF540-205ENST00000587220 RNF146Q9NTX7 359 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 FAM184BQ9ULE4 1060 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 PRR12Q9ULL5 1215 aa12.57□□□□□ -0.4
ZNF540-205ENST00000587220 POTEB2H3BUK9 544 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 ZNF213O14771 459 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 PLA2G6O60733 806 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 FGRP09769 529 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 ZNF865P0CJ78 1059 aaPredicted RBP12.56□□□□□ -0.4
ZNF540-205ENST00000587220 TOP1P11387 765 aaKnown RBP12.56□□□□□ -0.4
ZNF540-205ENST00000587220 SNAP25P60880 206 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 TKFCQ3LXA3 575 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 TRIM60Q495X7 471 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 AKNAD1Q5T1N1 836 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 MAMDC4Q6UXC1 1216 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 LENG1Q96BZ8 264 aaPredicted RBP12.56□□□□□ -0.4
ZNF540-205ENST00000587220 AGBL1Q96MI9 1066 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 TRERF1Q96PN7 1200 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 ABHD16BQ9H3Z7 469 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.56□□□□□ -0.4
ZNF540-205ENST00000587220 CCPG1Q9ULG6 757 aa12.56□□□□□ -0.4
ZNF540-205ENST00000587220 SMCHD1A6NHR9 2005 aa12.55□□□□□ -0.4
ZNF540-205ENST00000587220 SNAI1O95863 264 aaPredicted RBP12.55□□□□□ -0.4
ZNF540-205ENST00000587220 ACVR2BQ13705 512 aa12.55□□□□□ -0.4
ZNF540-205ENST00000587220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.55□□□□□ -0.4
ZNF540-205ENST00000587220 RASGRP2Q7LDG7 609 aa12.55□□□□□ -0.4
ZNF540-205ENST00000587220 CCDC144CPQ8IYA2 1237 aa12.55□□□□□ -0.4
ZNF540-205ENST00000587220 ESR2Q92731 530 aa12.55□□□□□ -0.4
ZNF540-205ENST00000587220 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
ZNF540-205ENST00000587220 TMEM47Q9BQJ4 181 aa12.55□□□□□ -0.4
ZNF540-205ENST00000587220 SPC25Q9HBM1 224 aa12.55□□□□□ -0.4
ZNF540-205ENST00000587220 A1CFQ9NQ94 594 aaKnown RBP12.55□□□□□ -0.4
ZNF540-205ENST00000587220 PHF24Q9UPV7 400 aa12.55□□□□□ -0.4
ZNF540-205ENST00000587220 TACC3Q9Y6A5 838 aa12.55□□□□□ -0.4
ZNF540-205ENST00000587220 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
ZNF540-205ENST00000587220 SYNRGQ9UMZ2 1314 aa12.55□□□□□ -0.4
ZNF540-205ENST00000587220 A0A1W2PQ45 241 aaPredicted RBP12.54□□□□□ -0.4
ZNF540-205ENST00000587220 A0A1W2PQY0 241 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 SOX1O00570 391 aaPredicted RBP12.54□□□□□ -0.4
ZNF540-205ENST00000587220 DUSP11O75319 330 aaKnown RBP12.54□□□□□ -0.4
ZNF540-205ENST00000587220 C6orf222P0C671 652 aaPredicted RBP12.54□□□□□ -0.4
ZNF540-205ENST00000587220 SLC16A2P36021 539 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 CNTN2Q02246 1040 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 SNX17Q15036 470 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 CCDC144BQ3MJ40 725 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 NOL8Q76FK4 1167 aaKnown RBP12.54□□□□□ -0.4
ZNF540-205ENST00000587220 ARMCX2Q7L311 632 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 TBC1D10CQ8IV04 446 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 NUP133Q8WUM0 1156 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 GPCPD1Q9NPB8 672 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 TCP11L1Q9NUJ3 509 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 ZNF536O15090 1300 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 MCM3APO60318 1980 aa12.54□□□□□ -0.4
ZNF540-205ENST00000587220 LAMA4Q16363 1823 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 ASB14A6NK59 587 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 PQBP1O60828 265 aaKnown RBP12.53□□□□□ -0.4
ZNF540-205ENST00000587220 ADAMTS4O75173 837 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 ICAM1P05362 532 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 NOVP48745 357 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 ACLYP53396 1101 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 IMMTQ16891 758 aaKnown RBP12.53□□□□□ -0.4
ZNF540-205ENST00000587220 LRIT3Q3SXY7 679 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 SYDE2Q5VT97 1194 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 C1orf53Q5VUE5 145 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 NSMFQ6X4W1 530 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 IQCA1Q86XH1 822 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 FAM133AQ8N9E0 248 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 TTC14Q96N46 770 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 TSEN34Q9BSV6 310 aaKnown RBP12.53□□□□□ -0.4
ZNF540-205ENST00000587220 STARD7Q9NQZ5 370 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 CTNNA3Q9UI47 895 aa12.53□□□□□ -0.4
ZNF540-205ENST00000587220 LAMA2P24043 3122 aaKnown RBP12.53□□□□□ -0.4
ZNF540-205ENST00000587220 MOXD2PA6NHM9 499 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 PDHBP11177 359 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 NT5C2P49902 561 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 TLE2Q04725 743 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 KCNA10Q16322 511 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 MUM1L1Q5H9M0 696 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 TTBK2Q6IQ55 1244 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 PCSK9Q8NBP7 692 aaKnown RBP12.52□□□□□ -0.41
ZNF540-205ENST00000587220 VTI1AQ96AJ9 217 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 FGD4Q96M96 766 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 GLT1D1Q96MS3 346 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms