RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 SMCR8Q8TEV9 937 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-212ENST00000587169 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.91■□□□□ 0.62
CIRBP-212ENST00000587169 SAR1BQ9Y6B6 198 aa18.91■□□□□ 0.62
CIRBP-212ENST00000587169 RASSF10A6NK89 507 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 PDE2AO00408 941 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-212ENST00000587169 ERCC3P19447 782 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 USP14P54578 494 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 ERFEQ4G0M1 354 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 RCSD1Q6JBY9 416 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 ZNF507Q8TCN5 953 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 PCMTD1Q96MG8 357 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-212ENST00000587169 RMND1Q9NWS8 449 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 MYO1AQ9UBC5 1043 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 CICQ96RK0 1608 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-212ENST00000587169 USP17L8P0C7I0 530 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 TRIM14Q14142 442 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 AMIGO3Q86WK7 504 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 RRP15Q9Y3B9 282 aaKnown RBP18.9■□□□□ 0.62
CIRBP-212ENST00000587169 KLRC4O43908 158 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 TRIM21P19474 475 aaKnown RBP18.9■□□□□ 0.62
CIRBP-212ENST00000587169 CAVIN4Q5BKX8 364 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 KRT26Q7Z3Y9 468 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 ANKRD18AQ8IVF6 992 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 CELF1Q92879 486 aaKnown RBP18.9■□□□□ 0.62
CIRBP-212ENST00000587169 DYNLL2Q96FJ2 89 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 DRC1Q96MC2 740 aa18.9■□□□□ 0.62
CIRBP-212ENST00000587169 LOC102724428A0A0B4J2F2 783 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 RNF40O75150 1001 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 SIK1P57059 783 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 TSR1Q2NL82 804 aaKnown RBP18.89■□□□□ 0.61
CIRBP-212ENST00000587169 DTHD1Q6ZMT9 781 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 NSUN4Q96CB9 384 aaKnown RBP18.89■□□□□ 0.61
CIRBP-212ENST00000587169 DNAJC7Q99615 494 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 DUOX1Q9NRD9 1551 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 ITGB4P16144 1822 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 PSMD14O00487 310 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 SYF2O95926 243 aaKnown RBP18.89■□□□□ 0.61
CIRBP-212ENST00000587169 PLEKP08567 350 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-212ENST00000587169 FGRP09769 529 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 LONP1P36776 959 aaKnown RBP18.89■□□□□ 0.61
CIRBP-212ENST00000587169 UBA7P41226 1012 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 SLC35G1Q2M3R5 365 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 SRLQ86TD4 932 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 JAKMIP2Q96AA8 810 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 GBP3Q9H0R5 595 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 HAUS4Q9H6D7 363 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 CAPN11Q9UMQ6 739 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 MINPP1Q9UNW1 487 aa18.89■□□□□ 0.61
CIRBP-212ENST00000587169 CSGALNACT2Q8N6G5 542 aa18.88■□□□□ 0.61
CIRBP-212ENST00000587169 TUBGCP2Q9BSJ2 902 aa18.88■□□□□ 0.61
CIRBP-212ENST00000587169 CWC15Q9P013 229 aaKnown RBP18.88■□□□□ 0.61
CIRBP-212ENST00000587169 RSPH14Q9UHP6 348 aa18.88■□□□□ 0.61
CIRBP-212ENST00000587169 TRAPPC10P48553 1259 aa18.88■□□□□ 0.61
CIRBP-212ENST00000587169 C2orf54Q08AI8 447 aa18.88■□□□□ 0.61
CIRBP-212ENST00000587169 WDR93Q6P2C0 686 aa18.88■□□□□ 0.61
CIRBP-212ENST00000587169 CAGE1Q8TC20 777 aa18.88■□□□□ 0.61
CIRBP-212ENST00000587169 FAM71BQ8TC56 605 aa18.88■□□□□ 0.61
CIRBP-212ENST00000587169 PSMB7Q99436 277 aa18.88■□□□□ 0.61
CIRBP-212ENST00000587169 DUSP9Q99956 384 aaKnown RBP18.88■□□□□ 0.61
CIRBP-212ENST00000587169 MCM9Q9NXL9 1143 aa18.88■□□□□ 0.61
CIRBP-212ENST00000587169 MAGEC2Q9UBF1 373 aaPredicted RBP18.88■□□□□ 0.61
CIRBP-212ENST00000587169 DISP2A7MBM2 1401 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 PCNTO95613 3336 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 CCDC194A0A1B0GVG4 234 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 GOLGA8HP0CJ92 632 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 FCER1AP12319 257 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 TFAP4Q01664 338 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 TBC1D8BQ0IIM8 1120 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 CCDC178Q5BJE1 867 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 TTI2Q6NXR4 508 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 HEATR3Q7Z4Q2 680 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 NHEJ1Q9H9Q4 299 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-212ENST00000587169 JADE2Q9NQC1 790 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 ANKRD36CQ5JPF3 1778 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 USP17L3A6NCW0 530 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 USP17L4A6NCW7 530 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 LRRC31Q6UY01 552 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 USP17L1Q7RTZ2 530 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 IL17RBQ9NRM6 502 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 TAF1P21675 1872 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 ARAP2Q8WZ64 1704 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 STK4Q13043 487 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 EZH2Q15910 746 aaKnown RBP18.87■□□□□ 0.61
CIRBP-212ENST00000587169 ANKRD40Q6AI12 368 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 SMARCAL1Q9NZC9 954 aa18.87■□□□□ 0.61
CIRBP-212ENST00000587169 PSMA7O14818 248 aa18.86■□□□□ 0.61
CIRBP-212ENST00000587169 PARP10Q53GL7 1025 aa18.86■□□□□ 0.61
CIRBP-212ENST00000587169 FKBP15Q5T1M5 1219 aa18.86■□□□□ 0.61
CIRBP-212ENST00000587169 ARL6IP4Q66PJ3 421 aaKnown RBP18.86■□□□□ 0.61
CIRBP-212ENST00000587169 RASSF4Q9H2L5 321 aa18.86■□□□□ 0.61
CIRBP-212ENST00000587169 RABEP2Q9H5N1 569 aa18.86■□□□□ 0.61
CIRBP-212ENST00000587169 KAT14Q9H8E8 782 aa18.86■□□□□ 0.61
CIRBP-212ENST00000587169 PCDHA4Q9UN74 947 aa18.86■□□□□ 0.61
CIRBP-212ENST00000587169 PDS5AQ29RF7 1337 aaKnown RBP18.86■□□□□ 0.61
CIRBP-212ENST00000587169 HPCAL4Q9UM19 191 aa18.86■□□□□ 0.61
CIRBP-212ENST00000587169 PCDHA6Q9UN73 950 aa18.86■□□□□ 0.61
CIRBP-212ENST00000587169 PCDHA8Q9Y5H6 950 aa18.86■□□□□ 0.61
CIRBP-212ENST00000587169 ZNF263O14978 683 aa18.85■□□□□ 0.61
CIRBP-212ENST00000587169 SLC44A5Q8NCS7 719 aa18.85■□□□□ 0.61
CIRBP-212ENST00000587169 PNMA1Q8ND90 353 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms