RNA–Protein interactions for RNA: ENST00000586568.1

CXXC1-206, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-206ENST00000586568 UPF3AQ9H1J1 476 aaKnown RBP17.48■□□□□ 0.39
CXXC1-206ENST00000586568 TIMP1P01033 207 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 GJA9P57773 515 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 CNTN2Q02246 1040 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 FPGSQ05932 587 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 PPARAQ07869 468 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 ARMCX2Q7L311 632 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 CCDC144CPQ8IYA2 1237 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 FAM133AQ8N9E0 248 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 PCSK9Q8NBP7 692 aaKnown RBP17.47■□□□□ 0.39
CXXC1-206ENST00000586568 STAG1Q8WVM7 1258 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 RNPC3Q96LT9 517 aaKnown RBP17.47■□□□□ 0.39
CXXC1-206ENST00000586568 KATNBL1Q9H079 304 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 NAPBQ9H115 298 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 TBX21Q9UL17 535 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 PLIN4Q96Q06 1357 aa17.47■□□□□ 0.39
CXXC1-206ENST00000586568 CTAGE5O15320 804 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 FOXP2O15409 715 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 PLA2G6O60733 806 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 ASGR1P07306 291 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 C6orf222P0C671 652 aaPredicted RBP17.46■□□□□ 0.39
CXXC1-206ENST00000586568 MCCP23508 829 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 STAT2P52630 851 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 NKX3-2P78367 333 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 GNASQ5JWF2 1037 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 FAM160B2Q86V87 743 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 AGBL1Q96MI9 1066 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 GLT1D1Q96MS3 346 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 FSD1Q9BTV5 496 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 COL25A1Q9BXS0 654 aaPredicted RBP17.46■□□□□ 0.39
CXXC1-206ENST00000586568 SPC25Q9HBM1 224 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 HOMER2Q9NSB8 354 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.46■□□□□ 0.39
CXXC1-206ENST00000586568 BAZ2AQ9UIF9 1905 aaKnown RBP17.46■□□□□ 0.39
CXXC1-206ENST00000586568 FRMPD3Q5JV73 1810 aa17.46■□□□□ 0.39
CXXC1-206ENST00000586568 ZNF536O15090 1300 aa17.46■□□□□ 0.38
CXXC1-206ENST00000586568 SLC1A4P43007 532 aa17.45■□□□□ 0.38
CXXC1-206ENST00000586568 PPP4R3BQ5MIZ7 849 aa17.45■□□□□ 0.38
CXXC1-206ENST00000586568 RCSD1Q6JBY9 416 aa17.45■□□□□ 0.38
CXXC1-206ENST00000586568 ACAD9Q9H845 621 aa17.45■□□□□ 0.38
CXXC1-206ENST00000586568 INCENPQ9NQS7 918 aa17.45■□□□□ 0.38
CXXC1-206ENST00000586568 IL17RBQ9NRM6 502 aa17.45■□□□□ 0.38
CXXC1-206ENST00000586568 TMEM265A0A087WTH1 108 aa17.44■□□□□ 0.38
CXXC1-206ENST00000586568 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.44■□□□□ 0.38
CXXC1-206ENST00000586568 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.44■□□□□ 0.38
CXXC1-206ENST00000586568 SOWAHBA6NEL2 793 aa17.44■□□□□ 0.38
CXXC1-206ENST00000586568 ARVCFO00192 962 aa17.44■□□□□ 0.38
CXXC1-206ENST00000586568 MX1P20591 662 aa17.44■□□□□ 0.38
CXXC1-206ENST00000586568 TKFCQ3LXA3 575 aa17.44■□□□□ 0.38
CXXC1-206ENST00000586568 MFSD5Q6N075 450 aa17.44■□□□□ 0.38
CXXC1-206ENST00000586568 C16orf59Q7L2K0 433 aa17.44■□□□□ 0.38
CXXC1-206ENST00000586568 MAFAQ8NHW3 353 aaPredicted RBP17.44■□□□□ 0.38
CXXC1-206ENST00000586568 MYLIPQ8WY64 445 aa17.44■□□□□ 0.38
CXXC1-206ENST00000586568 VTI1AQ96AJ9 217 aa17.44■□□□□ 0.38
CXXC1-206ENST00000586568 A1CFQ9NQ94 594 aaKnown RBP17.44■□□□□ 0.38
CXXC1-206ENST00000586568 NOVP48745 357 aa17.43■□□□□ 0.38
CXXC1-206ENST00000586568 TNFAIP2Q03169 654 aa17.43■□□□□ 0.38
CXXC1-206ENST00000586568 TRERF1Q96PN7 1200 aa17.43■□□□□ 0.38
CXXC1-206ENST00000586568 RNF146Q9NTX7 359 aa17.43■□□□□ 0.38
CXXC1-206ENST00000586568 ANAPC4Q9UJX5 808 aa17.43■□□□□ 0.38
CXXC1-206ENST00000586568 STX8Q9UNK0 236 aa17.43■□□□□ 0.38
CXXC1-206ENST00000586568 PRUNE2Q8WUY3 3088 aa17.43■□□□□ 0.38
CXXC1-206ENST00000586568 MROH7Q68CQ1 1323 aa17.43■□□□□ 0.38
CXXC1-206ENST00000586568 SMCHD1A6NHR9 2005 aa17.42■□□□□ 0.38
CXXC1-206ENST00000586568 EYSQ5T1H1 3165 aa17.42■□□□□ 0.38
CXXC1-206ENST00000586568 A0A0U1RQG5 324 aaPredicted RBP17.42■□□□□ 0.38
CXXC1-206ENST00000586568 ASB14A6NK59 587 aa17.42■□□□□ 0.38
CXXC1-206ENST00000586568 NMT2O60551 498 aa17.42■□□□□ 0.38
CXXC1-206ENST00000586568 CTDSPL2Q05D32 466 aa17.42■□□□□ 0.38
CXXC1-206ENST00000586568 IKQ13123 557 aaPredicted RBP17.42■□□□□ 0.38
CXXC1-206ENST00000586568 CCDC129Q6ZRS4 1044 aa17.42■□□□□ 0.38
CXXC1-206ENST00000586568 KCTD1Q719H9 257 aa17.42■□□□□ 0.38
CXXC1-206ENST00000586568 CHMP4CQ96CF2 233 aa17.42■□□□□ 0.38
CXXC1-206ENST00000586568 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.42■□□□□ 0.389e-8■■□□□ 12.4
CXXC1-206ENST00000586568 ISY1Q9ULR0 285 aaKnown RBP17.42■□□□□ 0.38
CXXC1-206ENST00000586568 GREB1LQ9C091 1923 aaPredicted RBP17.42■□□□□ 0.38
CXXC1-206ENST00000586568 VCANP13611 3396 aa17.42■□□□□ 0.38
CXXC1-206ENST00000586568 SALL3Q9BXA9 1300 aa17.42■□□□□ 0.38
CXXC1-206ENST00000586568 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.41■□□□□ 0.38
CXXC1-206ENST00000586568 TSPY2A6NKD2 308 aa17.41■□□□□ 0.38
CXXC1-206ENST00000586568 FGRP09769 529 aa17.41■□□□□ 0.38
CXXC1-206ENST00000586568 ALAS1P13196 640 aa17.41■□□□□ 0.38
CXXC1-206ENST00000586568 SNAP25P60880 206 aa17.41■□□□□ 0.38
CXXC1-206ENST00000586568 ALX1Q15699 326 aa17.41■□□□□ 0.38
CXXC1-206ENST00000586568 RASIP1Q5U651 963 aa17.41■□□□□ 0.38
CXXC1-206ENST00000586568 FAM126BQ8IXS8 530 aa17.41■□□□□ 0.38
CXXC1-206ENST00000586568 SLC43A3Q8NBI5 491 aa17.41■□□□□ 0.38
CXXC1-206ENST00000586568 PRR12Q9ULL5 1215 aa17.41■□□□□ 0.38
CXXC1-206ENST00000586568 GNEQ9Y223 722 aaKnown RBP17.41■□□□□ 0.38
CXXC1-206ENST00000586568 LTBP2Q14767 1821 aa17.41■□□□□ 0.38
CXXC1-206ENST00000586568 ASTN1O14525 1302 aa17.41■□□□□ 0.38
CXXC1-206ENST00000586568 PARP14Q460N5 1801 aa17.4■□□□□ 0.38
CXXC1-206ENST00000586568 ORC4O43929 436 aa17.4■□□□□ 0.38
CXXC1-206ENST00000586568 CD4P01730 458 aa17.4■□□□□ 0.38
CXXC1-206ENST00000586568 DNAJB2P25686 324 aa17.4■□□□□ 0.38
CXXC1-206ENST00000586568 BEX3Q00994 111 aa17.4■□□□□ 0.38
CXXC1-206ENST00000586568 PPIGQ13427 754 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■□□□ 12.8
CXXC1-206ENST00000586568 GRIN2CQ14957 1233 aa17.4■□□□□ 0.38
CXXC1-206ENST00000586568 MUM1L1Q5H9M0 696 aa17.4■□□□□ 0.38
CXXC1-206ENST00000586568 TMEM240Q5SV17 173 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms