RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CPXCR1Q8N123 301 aa22.27■■□□□ 1.16
DDX39A-204ENST00000586558 CPVLQ9H3G5 476 aa22.27■■□□□ 1.16
DDX39A-204ENST00000586558 RIOX1Q9H6W3 641 aa22.27■■□□□ 1.16
DDX39A-204ENST00000586558 JMJD4Q9H9V9 463 aa22.27■■□□□ 1.16
DDX39A-204ENST00000586558 EFCC1Q9HA90 598 aa22.27■■□□□ 1.16
DDX39A-204ENST00000586558 RAVER2Q9HCJ3 691 aaKnown RBP22.27■■□□□ 1.16
DDX39A-204ENST00000586558 ZNF536O15090 1300 aa22.27■■□□□ 1.16
DDX39A-204ENST00000586558 PDIA3P30101 505 aaKnown RBP22.26■■□□□ 1.15
DDX39A-204ENST00000586558 AK2P54819 239 aa22.26■■□□□ 1.15
DDX39A-204ENST00000586558 CDC37Q16543 378 aaPredicted RBP22.26■■□□□ 1.15
DDX39A-204ENST00000586558 TKFCQ3LXA3 575 aa22.26■■□□□ 1.15
DDX39A-204ENST00000586558 TMTC3Q6ZXV5 915 aa22.26■■□□□ 1.15
DDX39A-204ENST00000586558 RAB11FIP4Q86YS3 637 aa22.26■■□□□ 1.15
DDX39A-204ENST00000586558 CCDC144CPQ8IYA2 1237 aa22.26■■□□□ 1.15
DDX39A-204ENST00000586558 COA7Q96BR5 231 aa22.26■■□□□ 1.15
DDX39A-204ENST00000586558 MTMR8Q96EF0 704 aa22.26■■□□□ 1.15
DDX39A-204ENST00000586558 ARHGAP39Q9C0H5 1083 aa22.26■■□□□ 1.15
DDX39A-204ENST00000586558 CWC22Q9HCG8 908 aaKnown RBP22.26■■□□□ 1.15
DDX39A-204ENST00000586558 HPS5Q9UPZ3 1129 aa22.26■■□□□ 1.15
DDX39A-204ENST00000586558 ERCC3P19447 782 aa22.25■■□□□ 1.15
DDX39A-204ENST00000586558 HOXD10P28358 340 aa22.25■■□□□ 1.15
DDX39A-204ENST00000586558 CTGFP29279 349 aa22.25■■□□□ 1.15
DDX39A-204ENST00000586558 CCDC174Q6PII3 467 aa22.25■■□□□ 1.15
DDX39A-204ENST00000586558 PLEKHH3Q7Z736 793 aa22.25■■□□□ 1.15
DDX39A-204ENST00000586558 CTU1Q7Z7A3 348 aaKnown RBP22.25■■□□□ 1.15
DDX39A-204ENST00000586558 NCAPG2Q86XI2 1143 aa22.25■■□□□ 1.15
DDX39A-204ENST00000586558 FBXO40Q9UH90 709 aa22.25■■□□□ 1.15
DDX39A-204ENST00000586558 CCPG1Q9ULG6 757 aa22.25■■□□□ 1.15
DDX39A-204ENST00000586558 IVNS1ABPQ9Y6Y0 642 aa22.25■■□□□ 1.15
DDX39A-204ENST00000586558 STRNO43815 780 aa22.24■■□□□ 1.15
DDX39A-204ENST00000586558 PLEKHA8P1O95397 391 aa22.24■■□□□ 1.15
DDX39A-204ENST00000586558 PRMT2P55345 433 aa22.24■■□□□ 1.15
DDX39A-204ENST00000586558 SNAP25P60880 206 aa22.24■■□□□ 1.15
DDX39A-204ENST00000586558 TRAF1Q13077 416 aa22.24■■□□□ 1.15
DDX39A-204ENST00000586558 SLC35G1Q2M3R5 365 aa22.24■■□□□ 1.15
DDX39A-204ENST00000586558 OTOP1Q7RTM1 612 aa22.24■■□□□ 1.15
DDX39A-204ENST00000586558 GPR142Q7Z601 462 aa22.24■■□□□ 1.15
DDX39A-204ENST00000586558 NBPF11Q86T75 865 aa22.24■■□□□ 1.15
DDX39A-204ENST00000586558 CHST13Q8NET6 341 aa22.24■■□□□ 1.15
DDX39A-204ENST00000586558 VAT1LQ9HCJ6 419 aa22.24■■□□□ 1.15
DDX39A-204ENST00000586558 COL11A1P12107 1806 aaPredicted RBP22.24■■□□□ 1.15
DDX39A-204ENST00000586558 ZBTB5O15062 677 aa22.23■■□□□ 1.15
DDX39A-204ENST00000586558 CYTH3O43739 400 aa22.23■■□□□ 1.15
DDX39A-204ENST00000586558 QRICH1Q2TAL8 776 aa22.23■■□□□ 1.15
DDX39A-204ENST00000586558 WDR78Q5VTH9 848 aa22.23■■□□□ 1.15
DDX39A-204ENST00000586558 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.23■■□□□ 1.15
DDX39A-204ENST00000586558 ABRAQ8N0Z2 381 aa22.23■■□□□ 1.15
DDX39A-204ENST00000586558 SRBD1Q8N5C6 995 aaKnown RBP22.23■■□□□ 1.15
DDX39A-204ENST00000586558 SOCS4Q8WXH5 440 aa22.23■■□□□ 1.15
DDX39A-204ENST00000586558 RRP36Q96EU6 259 aaKnown RBP22.23■■□□□ 1.15
DDX39A-204ENST00000586558 AGBL1Q96MI9 1066 aa22.23■■□□□ 1.15
DDX39A-204ENST00000586558 FAM217BQ9NTX9 383 aaPredicted RBP22.23■■□□□ 1.15
DDX39A-204ENST00000586558 TRIM17Q9Y577 477 aa22.23■■□□□ 1.15
DDX39A-204ENST00000586558 PNMA6FA0A0J9YX94 578 aa22.22■■□□□ 1.15
DDX39A-204ENST00000586558 SLC15A5A6NIM6 579 aa22.22■■□□□ 1.15
DDX39A-204ENST00000586558 CDC27P30260 824 aa22.22■■□□□ 1.15
DDX39A-204ENST00000586558 CAP1Q01518 475 aa22.22■■□□□ 1.15
DDX39A-204ENST00000586558 FBXO11Q86XK2 927 aa22.22■■□□□ 1.15
DDX39A-204ENST00000586558 SRRDQ9UH36 339 aa22.22■■□□□ 1.15
DDX39A-204ENST00000586558 RIPK3Q9Y572 518 aa22.22■■□□□ 1.15
DDX39A-204ENST00000586558 ST18O60284 1047 aa22.21■■□□□ 1.15
DDX39A-204ENST00000586558 FCER1AP12319 257 aa22.21■■□□□ 1.15
DDX39A-204ENST00000586558 ALAS1P13196 640 aa22.21■■□□□ 1.15
DDX39A-204ENST00000586558 PTPREP23469 700 aa22.21■■□□□ 1.15
DDX39A-204ENST00000586558 PKN2Q16513 984 aaKnown RBP22.21■■□□□ 1.15
DDX39A-204ENST00000586558 PIGSQ96S52 555 aa22.21■■□□□ 1.15
DDX39A-204ENST00000586558 AMNQ9BXJ7 453 aa22.21■■□□□ 1.15
DDX39A-204ENST00000586558 ACAD9Q9H845 621 aa22.21■■□□□ 1.15
DDX39A-204ENST00000586558 RNF146Q9NTX7 359 aa22.21■■□□□ 1.15
DDX39A-204ENST00000586558 SEC63Q9UGP8 760 aaKnown RBP22.21■■□□□ 1.15
DDX39A-204ENST00000586558 TPCN1Q9ULQ1 816 aa22.21■■□□□ 1.15
DDX39A-204ENST00000586558 CASP8AP2Q9UKL3 1982 aa22.21■■□□□ 1.15
DDX39A-204ENST00000586558 ECM2O94769 699 aaPredicted RBP22.2■■□□□ 1.14
DDX39A-204ENST00000586558 ADD1P35611 737 aaKnown RBP22.2■■□□□ 1.14
DDX39A-204ENST00000586558 SLC4A3P48751 1232 aa22.2■■□□□ 1.14
DDX39A-204ENST00000586558 FUT2Q10981 343 aa22.2■■□□□ 1.14
DDX39A-204ENST00000586558 GRB14Q14449 540 aa22.2■■□□□ 1.14
DDX39A-204ENST00000586558 KCTD2Q14681 263 aa22.2■■□□□ 1.14
DDX39A-204ENST00000586558 HOMER1Q86YM7 354 aa22.2■■□□□ 1.14
DDX39A-204ENST00000586558 TRERF1Q96PN7 1200 aa22.2■■□□□ 1.14
DDX39A-204ENST00000586558 NUDT12Q9BQG2 462 aa22.2■■□□□ 1.14
DDX39A-204ENST00000586558 LARP6Q9BRS8 491 aaKnown RBP22.2■■□□□ 1.14
DDX39A-204ENST00000586558 SLKQ9H2G2 1235 aaPredicted RBP22.2■■□□□ 1.14
DDX39A-204ENST00000586558 HOMER2Q9NSB8 354 aa22.2■■□□□ 1.14
DDX39A-204ENST00000586558 PFKFB2O60825 505 aa22.19■■□□□ 1.14
DDX39A-204ENST00000586558 MORN1Q5T089 497 aa22.19■■□□□ 1.14
DDX39A-204ENST00000586558 IFFO2Q5TF58 517 aa22.19■■□□□ 1.14
DDX39A-204ENST00000586558 CPLX2Q6PUV4 134 aaKnown RBP22.19■■□□□ 1.14
DDX39A-204ENST00000586558 CMTR1Q8N1G2 835 aaKnown RBP22.19■■□□□ 1.14
DDX39A-204ENST00000586558 MMP19Q99542 508 aa22.19■■□□□ 1.14
DDX39A-204ENST00000586558 MAF1Q9H063 256 aa22.19■■□□□ 1.14
DDX39A-204ENST00000586558 RBM27Q9P2N5 1060 aaKnown RBP22.19■■□□□ 1.14
DDX39A-204ENST00000586558 GJD2Q9UKL4 321 aa22.19■■□□□ 1.14
DDX39A-204ENST00000586558 LIMCH1Q9UPQ0 1083 aa22.19■■□□□ 1.14
DDX39A-204ENST00000586558 ABCB11O95342 1321 aa22.19■■□□□ 1.14
DDX39A-204ENST00000586558 CNTNAP5Q8WYK1 1306 aa22.19■■□□□ 1.14
DDX39A-204ENST00000586558 MGAMO43451 1857 aa22.19■■□□□ 1.14
DDX39A-204ENST00000586558 ZSWIM8A7E2V4 1837 aa22.18■■□□□ 1.14
DDX39A-204ENST00000586558 ZNF236Q9UL36 1845 aa22.18■■□□□ 1.14
DDX39A-204ENST00000586558 CPLX1O14810 134 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms