RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 BADQ92934 168 aa12.57□□□□□ -0.4
MBD3-203ENST00000585903 NUP88Q99567 741 aaPredicted RBP12.57□□□□□ -0.4
MBD3-203ENST00000585903 NAPBQ9H115 298 aa12.57□□□□□ -0.4
MBD3-203ENST00000585903 SPC25Q9HBM1 224 aa12.57□□□□□ -0.4
MBD3-203ENST00000585903 ANAPC4Q9UJX5 808 aa12.57□□□□□ -0.4
MBD3-203ENST00000585903 RIPK3Q9Y572 518 aa12.57□□□□□ -0.4
MBD3-203ENST00000585903 SALL3Q9BXA9 1300 aa12.57□□□□□ -0.4
MBD3-203ENST00000585903 SYNRGQ9UMZ2 1314 aa12.57□□□□□ -0.4
MBD3-203ENST00000585903 LOC102724159A0A0B4J2E5 919 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 TRIM43BA6NCK2 446 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 DCDC2CA8MYV0 355 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 PGK1P00558 417 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 TAL1P17542 331 aaPredicted RBP12.56□□□□□ -0.4
MBD3-203ENST00000585903 COL9A1P20849 921 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 NT5C2P49902 561 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 GJA9P57773 515 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 ACVR2BQ13705 512 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 PWP2Q15269 919 aaKnown RBP12.56□□□□□ -0.4
MBD3-203ENST00000585903 SHHQ15465 462 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 ALX1Q15699 326 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 SLFN13Q68D06 897 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 RCSD1Q6JBY9 416 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 ANKRD35Q8N283 1001 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 STAG1Q8WVM7 1258 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 KIFC2Q96AC6 838 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 TRIM43Q96BQ3 446 aaPredicted RBP12.56□□□□□ -0.4
MBD3-203ENST00000585903 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 FAM161BQ96MY7 647 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 FSD1Q9BTV5 496 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 ACAD9Q9H845 621 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 PRDM5Q9NQX1 630 aaPredicted RBP12.56□□□□□ -0.4
MBD3-203ENST00000585903 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.56□□□□□ -0.4
MBD3-203ENST00000585903 ZMYM6O95789 1325 aa12.56□□□□□ -0.4
MBD3-203ENST00000585903 ASB14A6NK59 587 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 ORC4O43929 436 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 FGRP09769 529 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 PCP11498 1178 aaKnown RBP12.55□□□□□ -0.4
MBD3-203ENST00000585903 TFAP4Q01664 338 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 TSHZ3Q63HK5 1081 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 CCDC174Q6PII3 467 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 FAM133AQ8N9E0 248 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 FERMT2Q96AC1 680 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 EVI5LQ96CN4 794 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 GLT1D1Q96MS3 346 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 STARD7Q9NQZ5 370 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.55□□□□□ -0.4
MBD3-203ENST00000585903 PNMA2Q9UL42 364 aa12.55□□□□□ -0.4
MBD3-203ENST00000585903 PRDM1O75626 825 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 CABYRO75952 493 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 MYCNP04198 464 aaPredicted RBP12.54□□□□□ -0.4
MBD3-203ENST00000585903 RAG1P15918 1043 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 SLC1A4P43007 532 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 CDK7P50613 346 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 FPGSQ05932 587 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 FAAP100Q0VG06 881 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 KCNA10Q16322 511 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 CCDC144BQ3MJ40 725 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 CCDC129Q6ZRS4 1044 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 ARMCX2Q7L311 632 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 SH3RF1Q7Z6J0 888 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 CPXCR1Q8N123 301 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 MAFAQ8NHW3 353 aaPredicted RBP12.54□□□□□ -0.4
MBD3-203ENST00000585903 FGD4Q96M96 766 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 CDX2Q99626 313 aaPredicted RBP12.54□□□□□ -0.4
MBD3-203ENST00000585903 MAF1Q9H063 256 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 KATNBL1Q9H079 304 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 RAVER2Q9HCJ3 691 aaKnown RBP12.54□□□□□ -0.4
MBD3-203ENST00000585903 HELLSQ9NRZ9 838 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 TMEM39AQ9NV64 488 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 PPP4R2Q9NY27 417 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 TBX21Q9UL17 535 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 Q9Y3F1 56 aa12.54□□□□□ -0.4
MBD3-203ENST00000585903 A0A0U1RQG5 324 aaPredicted RBP12.53□□□□□ -0.4
MBD3-203ENST00000585903 TMEM232C9JQI7 657 aa12.53□□□□□ -0.4
MBD3-203ENST00000585903 TIMP1P01033 207 aa12.53□□□□□ -0.4
MBD3-203ENST00000585903 C9orf50Q5SZB4 431 aa12.53□□□□□ -0.4
MBD3-203ENST00000585903 LRRC47Q8N1G4 583 aaKnown RBP12.53□□□□□ -0.4
MBD3-203ENST00000585903 DCAF4Q8WV16 495 aa12.53□□□□□ -0.4
MBD3-203ENST00000585903 SYMPKQ92797 1274 aaKnown RBP12.53□□□□□ -0.4
MBD3-203ENST00000585903 TCP11L1Q9NUJ3 509 aa12.53□□□□□ -0.4
MBD3-203ENST00000585903 ZHX1Q9UKY1 873 aaPredicted RBP12.53□□□□□ -0.4
MBD3-203ENST00000585903 ZNF536O15090 1300 aa12.53□□□□□ -0.4
MBD3-203ENST00000585903 LRRC37A2A6NM11 1700 aa12.53□□□□□ -0.4
MBD3-203ENST00000585903 TSPY2A6NKD2 308 aa12.52□□□□□ -0.41
MBD3-203ENST00000585903 FOXP2O15409 715 aa12.52□□□□□ -0.41
MBD3-203ENST00000585903 PQBP1O60828 265 aaKnown RBP12.52□□□□□ -0.41
MBD3-203ENST00000585903 IGHDP01880 384 aa12.52□□□□□ -0.41
MBD3-203ENST00000585903 ASGR1P07306 291 aa12.52□□□□□ -0.41
MBD3-203ENST00000585903 C6orf222P0C671 652 aaPredicted RBP12.52□□□□□ -0.41
MBD3-203ENST00000585903 ITGB8P26012 769 aa12.52□□□□□ -0.41
MBD3-203ENST00000585903 MFSD5Q6N075 450 aa12.52□□□□□ -0.41
MBD3-203ENST00000585903 BTNL9Q6UXG8 535 aa12.52□□□□□ -0.41
MBD3-203ENST00000585903 CENPQQ7L2Z9 268 aaPredicted RBP12.52□□□□□ -0.41
MBD3-203ENST00000585903 SMC5Q8IY18 1101 aa12.52□□□□□ -0.41
MBD3-203ENST00000585903 CCDC144CPQ8IYA2 1237 aa12.52□□□□□ -0.41
MBD3-203ENST00000585903 MORC4Q8TE76 937 aa12.52□□□□□ -0.41
MBD3-203ENST00000585903 RNPC3Q96LT9 517 aaKnown RBP12.52□□□□□ -0.41
MBD3-203ENST00000585903 SEC62Q99442 399 aaKnown RBP12.52□□□□□ -0.41
MBD3-203ENST00000585903 SEMA6BQ9H3T3 888 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms