RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 JAK2O60674 1132 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 ALDH1A1P00352 501 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 HERVK_113P62684 666 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 TRAF1Q13077 416 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 SLC35G1Q2M3R5 365 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 FAM184AQ8NB25 1140 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 SMARCC2Q8TAQ2 1214 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 MTMR8Q96EF0 704 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 DDX11Q96FC9 970 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 RANBP17Q9H2T7 1088 aaKnown RBP21.18■□□□□ 0.98
RFFL-211ENST00000584541 PNMA2Q9UL42 364 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 THSD7BQ9C0I4 1608 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 VWA5AO00534 786 aa21.17■□□□□ 0.98
RFFL-211ENST00000584541 PPFIA3O75145 1194 aa21.17■□□□□ 0.98
RFFL-211ENST00000584541 TAF1CQ15572 869 aaPredicted RBP21.17■□□□□ 0.98
RFFL-211ENST00000584541 LBX2Q6XYB7 198 aa21.17■□□□□ 0.98
RFFL-211ENST00000584541 ZIC5Q96T25 663 aa21.17■□□□□ 0.98
RFFL-211ENST00000584541 SLC38A10Q9HBR0 1119 aa21.17■□□□□ 0.98
RFFL-211ENST00000584541 FOXD4L1Q9NU39 408 aa21.17■□□□□ 0.98
RFFL-211ENST00000584541 ADAMTS5Q9UNA0 930 aa21.17■□□□□ 0.98
RFFL-211ENST00000584541 hCG_1642624A0A1W2PR95 340 aa21.16■□□□□ 0.98
RFFL-211ENST00000584541 CYP2C8P10632 490 aa21.16■□□□□ 0.98
RFFL-211ENST00000584541 GCLCP48506 637 aaPredicted RBP21.16■□□□□ 0.98
RFFL-211ENST00000584541 SNAP25P60880 206 aa21.16■□□□□ 0.98
RFFL-211ENST00000584541 QRICH1Q2TAL8 776 aa21.16■□□□□ 0.98
RFFL-211ENST00000584541 CCDC174Q6PII3 467 aa21.16■□□□□ 0.98
RFFL-211ENST00000584541 AMNQ9BXJ7 453 aa21.16■□□□□ 0.98
RFFL-211ENST00000584541 hCG_1984214I3L0E3 225 aa21.15■□□□□ 0.98
RFFL-211ENST00000584541 SCG2P13521 617 aa21.15■□□□□ 0.98
RFFL-211ENST00000584541 XBP1P17861 261 aa21.15■□□□□ 0.98
RFFL-211ENST00000584541 GJB2P29033 226 aa21.15■□□□□ 0.98
RFFL-211ENST00000584541 OAZ1P54368 228 aa21.15■□□□□ 0.98
RFFL-211ENST00000584541 PFKFB3Q16875 520 aaPredicted RBP21.15■□□□□ 0.98
RFFL-211ENST00000584541 FBXO11Q86XK2 927 aa21.15■□□□□ 0.98
RFFL-211ENST00000584541 ZNF713Q8N859 430 aaPredicted RBP21.15■□□□□ 0.98
RFFL-211ENST00000584541 SPRYD3Q8NCJ5 442 aa21.15■□□□□ 0.98
RFFL-211ENST00000584541 ZFYVE28Q9HCC9 887 aa21.15■□□□□ 0.98
RFFL-211ENST00000584541 ICAM1P05362 532 aa21.14■□□□□ 0.97
RFFL-211ENST00000584541 PLS1Q14651 629 aa21.14■□□□□ 0.97
RFFL-211ENST00000584541 HEATR3Q7Z4Q2 680 aa21.14■□□□□ 0.97
RFFL-211ENST00000584541 CPXCR1Q8N123 301 aa21.14■□□□□ 0.97
RFFL-211ENST00000584541 PAGR1Q9BTK6 254 aa21.14■□□□□ 0.97
RFFL-211ENST00000584541 RABGAP1Q9Y3P9 1069 aa21.14■□□□□ 0.97
RFFL-211ENST00000584541 DTNBO60941 627 aa21.13■□□□□ 0.97
RFFL-211ENST00000584541 FDPSP14324 419 aaKnown RBP21.13■□□□□ 0.97
RFFL-211ENST00000584541 SLC4A3P48751 1232 aa21.13■□□□□ 0.97
RFFL-211ENST00000584541 PKN1Q16512 942 aa21.13■□□□□ 0.97
RFFL-211ENST00000584541 CCDC12Q8WUD4 166 aaPredicted RBP21.13■□□□□ 0.97
RFFL-211ENST00000584541 IPO9Q96P70 1041 aaKnown RBP21.13■□□□□ 0.97
RFFL-211ENST00000584541 ALG1Q9BT22 464 aa21.13■□□□□ 0.97
RFFL-211ENST00000584541 RAVER2Q9HCJ3 691 aaKnown RBP21.13■□□□□ 0.97
RFFL-211ENST00000584541 CCPG1Q9ULG6 757 aa21.13■□□□□ 0.97
RFFL-211ENST00000584541 ATP2A1O14983 1001 aa21.12■□□□□ 0.97
RFFL-211ENST00000584541 TRIM29Q14134 588 aa21.12■□□□□ 0.97
RFFL-211ENST00000584541 TMEM132BQ14DG7 1078 aa21.12■□□□□ 0.97
RFFL-211ENST00000584541 USH1GQ495M9 461 aa21.12■□□□□ 0.97
RFFL-211ENST00000584541 REPS2Q8NFH8 660 aa21.12■□□□□ 0.97
RFFL-211ENST00000584541 TEX13BQ9BXU2 312 aa21.12■□□□□ 0.97
RFFL-211ENST00000584541 CWC22Q9HCG8 908 aaKnown RBP21.12■□□□□ 0.97
RFFL-211ENST00000584541 PCDHA1Q9Y5I3 950 aa21.12■□□□□ 0.97
RFFL-211ENST00000584541 ABCB11O95342 1321 aa21.11■□□□□ 0.97
RFFL-211ENST00000584541 RBBP6Q7Z6E9 1792 aaKnown RBP21.11■□□□□ 0.97
RFFL-211ENST00000584541 CA12O43570 354 aa21.11■□□□□ 0.97
RFFL-211ENST00000584541 PDCP20941 246 aa21.11■□□□□ 0.97
RFFL-211ENST00000584541 SNRNP48Q6IEG0 339 aaKnown RBP21.11■□□□□ 0.97
RFFL-211ENST00000584541 CCDC148Q8NFR7 591 aa21.11■□□□□ 0.97
RFFL-211ENST00000584541 GPKOWQ92917 476 aaPredicted RBP eCLIP21.11■□□□□ 0.97
RFFL-211ENST00000584541 SH3GLB2Q9NR46 395 aa21.11■□□□□ 0.97
RFFL-211ENST00000584541 BARHL2Q9NY43 387 aa21.11■□□□□ 0.97
RFFL-211ENST00000584541 BTBD7Q9P203 1132 aa21.11■□□□□ 0.97
RFFL-211ENST00000584541 RBPJLQ9UBG7 517 aa21.11■□□□□ 0.97
RFFL-211ENST00000584541 ZNF214Q9UL59 606 aaPredicted RBP21.11■□□□□ 0.97
RFFL-211ENST00000584541 ZNF536O15090 1300 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 PPP1R11O60927 126 aaPredicted RBP21.1■□□□□ 0.97
RFFL-211ENST00000584541 COPB2P35606 906 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 STAT3P40763 770 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 NAPAP54920 295 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 CCNA1P78396 465 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 TKFCQ3LXA3 575 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 WWC2Q6AWC2 1192 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 PPP1R18Q6NYC8 613 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 FAM177A1Q8N128 213 aaPredicted RBP21.1■□□□□ 0.97
RFFL-211ENST00000584541 ANKRD13CQ8N6S4 541 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 GPRC5AQ8NFJ5 357 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 COA7Q96BR5 231 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 C8orf76Q96K31 380 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 AGBL1Q96MI9 1066 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 SPATC1LQ9H0A9 340 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 MRPL11Q9Y3B7 192 aaKnown RBP21.1■□□□□ 0.97
RFFL-211ENST00000584541 SMCHD1A6NHR9 2005 aa21.1■□□□□ 0.97
RFFL-211ENST00000584541 STXBP3O00186 592 aa21.09■□□□□ 0.97
RFFL-211ENST00000584541 TLR2O60603 784 aa21.09■□□□□ 0.97
RFFL-211ENST00000584541 ALAS1P13196 640 aa21.09■□□□□ 0.97
RFFL-211ENST00000584541 ERVK-9P63128 1117 aa21.09■□□□□ 0.97
RFFL-211ENST00000584541 ERVK-24P63145 666 aa21.09■□□□□ 0.97
RFFL-211ENST00000584541 CRHR2Q13324 411 aa21.09■□□□□ 0.97
RFFL-211ENST00000584541 AIFM3Q96NN9 605 aa21.09■□□□□ 0.97
RFFL-211ENST00000584541 VPS54Q9P1Q0 977 aa21.09■□□□□ 0.97
RFFL-211ENST00000584541 MORF4L1Q9UBU8 362 aa21.09■□□□□ 0.97
RFFL-211ENST00000584541 CNMDO75829 334 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms