RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 TP53P04637 393 aaPredicted RBP6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 SLC7A5Q01650 507 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 SNX17Q15036 470 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 ADGRF1Q5T601 910 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 TDRD10Q5VZ19 366 aaKnown RBP6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 TMEM132EQ6IEE7 984 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 IRF2BP1Q8IU81 584 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 CKAP2LQ8IYA6 745 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 ZSCAN18Q8TBC5 510 aaPredicted RBP6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 KLHL6Q8WZ60 621 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 MAP6Q96JE9 813 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 FAM86C1Q9NVL1 165 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 PRR13Q9NZ81 148 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 PCDHB10Q9UN67 800 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 NOTOA8MTQ0 251 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 SHOXO15266 292 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 KLF4O43474 513 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 EFEMP2O95967 443 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 CD247P20963 164 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 GTF2F1P35269 517 aaKnown RBP eCLIP6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 SPOCD1Q6ZMY3 1216 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 CILP2Q8IUL8 1156 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 SHISA4Q96DD7 197 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 HHIPL1Q96JK4 782 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 DSCC1Q9BVC3 393 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 CDADC1Q9BWV3 514 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 MCOLN1Q9GZU1 580 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 ACTR10Q9NZ32 417 aa6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 R3HCC1Q9Y3T6 440 aaKnown RBP6.14□□□□□ -1.43
PPP4R1-227ENST00000583988 A0A087WZG4 1122 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 CTSKP43235 329 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 KIR2DL1P43626 348 aaPredicted RBP6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 KIR2DL2P43627 348 aaPredicted RBP6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 RTP1P59025 263 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 KCNA10Q16322 511 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 FXNQ16595 210 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 DCAF15Q66K64 600 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 VHLLQ6RSH7 139 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 CRTC3Q6UUV7 619 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 ANKS3Q6ZW76 656 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 NLRX1Q86UT6 975 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 MKL1Q969V6 931 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 CD320Q9NPF0 282 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 SMG5Q9UPR3 1016 aaKnown RBP6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 ZNF451Q9Y4E5 1061 aa6.13□□□□□ -1.43
PPP4R1-227ENST00000583988 MYOCOSA0A1B0GUC4 107 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 CBFA2T2O43439 604 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 NRDCO43847 1150 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 MED14OSP0DP75 135 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 SDHBP21912 280 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 GLDCP23378 1020 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 RAB33AQ14088 237 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 NCAPHQ15003 741 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 TCEAL1Q15170 157 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 KIAA1211LQ6NV74 962 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 LRP10Q7Z4F1 713 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 FCRL2Q96LA5 508 aaPredicted RBP6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 HAUS7Q99871 368 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 PLCD4Q9BRC7 762 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 ZNF552Q9H707 407 aaPredicted RBP6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 GP6Q9HCN6 339 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 SIRPGQ9P1W8 387 aa6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 GPR55Q9Y2T6 319 aaPredicted RBP6.12□□□□□ -1.43
PPP4R1-227ENST00000583988 OR14I1A6ND48 311 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 ZSCAN22P10073 491 aaPredicted RBP6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 VAV1P15498 845 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 BMP8BP34820 402 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 ZNF445P59923 1031 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 KIR3DS1Q14943 382 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 FBLN7Q53RD9 439 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 NOL9Q5SY16 702 aaKnown RBP6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 HEATR6Q6AI08 1181 aaKnown RBP6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 CIAPIN1Q6FI81 312 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 C1QL4Q86Z23 238 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 MICAL1Q8TDZ2 1067 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 SGPP1Q9BX95 441 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 KLHL25Q9H0H3 589 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 AP5S1Q9NUS5 200 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 TNFRSF10DQ9UBN6 386 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 PPP1R1BQ9UD71 204 aaPredicted RBP6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 SUSD2Q9UGT4 822 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 FHOD1Q9Y613 1164 aa6.11□□□□□ -1.43
PPP4R1-227ENST00000583988 ANKRD34BA5PLL1 514 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 NUAK1O60285 661 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 PEX10O60683 326 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 ZNF205O95201 554 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 EPHX1P07099 455 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 ZNF143P52747 638 aaPredicted RBP6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 LINC00310P59036 64 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 DLG4P78352 724 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 LARP1BQ659C4 914 aaKnown RBP6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 CWF19L1Q69YN2 538 aaKnown RBP6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 C6orf15Q6UXA7 325 aaPredicted RBP6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 LCNL1Q6ZST4 164 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 FAM178BQ8IXR5 827 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 HNRNPLLQ8WVV9 542 aaKnown RBP6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 BRF1Q92994 677 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 ERVK13-1Q9NX77 482 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 DIS3Q9Y2L1 958 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms