RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 SNAP25P60880 206 aa17.98■□□□□ 0.47
SREBF1-222ENST00000583732 CNTN2Q02246 1040 aa17.98■□□□□ 0.47
SREBF1-222ENST00000583732 ARMCX2Q7L311 632 aa17.98■□□□□ 0.47
SREBF1-222ENST00000583732 ZNF467Q7Z7K2 595 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-222ENST00000583732 KLHDC9Q8NEP7 349 aa17.98■□□□□ 0.47
SREBF1-222ENST00000583732 NUP133Q8WUM0 1156 aa17.98■□□□□ 0.47
SREBF1-222ENST00000583732 RNPC3Q96LT9 517 aaKnown RBP17.98■□□□□ 0.47
SREBF1-222ENST00000583732 TSEN34Q9BSV6 310 aaKnown RBP17.98■□□□□ 0.47
SREBF1-222ENST00000583732 INCENPQ9NQS7 918 aa17.98■□□□□ 0.47
SREBF1-222ENST00000583732 SYNPO2Q9UMS6 1093 aa17.98■□□□□ 0.47
SREBF1-222ENST00000583732 STX8Q9UNK0 236 aa17.98■□□□□ 0.47
SREBF1-222ENST00000583732 MOXD2PA6NHM9 499 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 TSPY2A6NKD2 308 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 DCDC2CA8MYV0 355 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 MCCP23508 829 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 SLC1A4P43007 532 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 OAZ1P54368 228 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 FPGSQ05932 587 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 FAAP100Q0VG06 881 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 CCDC144BQ3MJ40 725 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 CCDC174Q6PII3 467 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 KCTD1Q719H9 257 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.97■□□□□ 0.47
SREBF1-222ENST00000583732 CCDC144CPQ8IYA2 1237 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 VTI1AQ96AJ9 217 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 AGBL1Q96MI9 1066 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 CDX2Q99626 313 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-222ENST00000583732 ABHD16BQ9H3Z7 469 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 ACAD9Q9H845 621 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 RNF146Q9NTX7 359 aa17.97■□□□□ 0.47
SREBF1-222ENST00000583732 FOXP2O15409 715 aa17.96■□□□□ 0.47
SREBF1-222ENST00000583732 NMT2O60551 498 aa17.96■□□□□ 0.47
SREBF1-222ENST00000583732 ALAS1P13196 640 aa17.96■□□□□ 0.47
SREBF1-222ENST00000583732 CCSAPQ6IQ19 270 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-222ENST00000583732 FAM160B2Q86V87 743 aa17.96■□□□□ 0.47
SREBF1-222ENST00000583732 STAG1Q8WVM7 1258 aa17.96■□□□□ 0.47
SREBF1-222ENST00000583732 GLT1D1Q96MS3 346 aa17.96■□□□□ 0.47
SREBF1-222ENST00000583732 SEMA6BQ9H3T3 888 aa17.96■□□□□ 0.47
SREBF1-222ENST00000583732 SPC25Q9HBM1 224 aa17.96■□□□□ 0.47
SREBF1-222ENST00000583732 ZBTB47Q9UFB7 747 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-222ENST00000583732 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.96■□□□□ 0.478e-6■■■□□ 18.6
SREBF1-222ENST00000583732 LCTP09848 1927 aa17.96■□□□□ 0.47
SREBF1-222ENST00000583732 ZNF536O15090 1300 aa17.96■□□□□ 0.46
SREBF1-222ENST00000583732 ASGR1P07306 291 aa17.95■□□□□ 0.46
SREBF1-222ENST00000583732 SMAD3P84022 425 aaKnown RBP17.95■□□□□ 0.46
SREBF1-222ENST00000583732 VPS53Q5VIR6 699 aa17.95■□□□□ 0.46
SREBF1-222ENST00000583732 ANKRD33Q7Z3H0 272 aa17.95■□□□□ 0.46
SREBF1-222ENST00000583732 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.95■□□□□ 0.46
SREBF1-222ENST00000583732 CHURC1Q8WUH1 139 aa17.95■□□□□ 0.46
SREBF1-222ENST00000583732 MYLIPQ8WY64 445 aa17.95■□□□□ 0.46
SREBF1-222ENST00000583732 GMCL1Q96IK5 515 aa17.95■□□□□ 0.46
SREBF1-222ENST00000583732 TTYH1Q9H313 450 aaPredicted RBP17.95■□□□□ 0.46
SREBF1-222ENST00000583732 A1CFQ9NQ94 594 aaKnown RBP17.95■□□□□ 0.46
SREBF1-222ENST00000583732 DDX49Q9Y6V7 483 aaKnown RBP17.95■□□□□ 0.46
SREBF1-222ENST00000583732 SALL3Q9BXA9 1300 aa17.95■□□□□ 0.46
SREBF1-222ENST00000583732 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-222ENST00000583732 RANBP6O60518 1105 aaKnown RBP17.94■□□□□ 0.46
SREBF1-222ENST00000583732 FDX1P10109 184 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 CST5P28325 142 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-222ENST00000583732 RRP1P56182 461 aaKnown RBP17.94■□□□□ 0.46
SREBF1-222ENST00000583732 GJA9P57773 515 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 BEX3Q00994 111 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 CCDC96Q2M329 555 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 GNASQ5JWF2 1037 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 ANKRD45Q5TZF3 282 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 NOL8Q76FK4 1167 aaKnown RBP17.94■□□□□ 0.46
SREBF1-222ENST00000583732 FAM133AQ8N9E0 248 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 PCSK9Q8NBP7 692 aaKnown RBP17.94■□□□□ 0.46
SREBF1-222ENST00000583732 TOX2Q96NM4 488 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 TRERF1Q96PN7 1200 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 CRBNQ96SW2 442 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 KATNBL1Q9H079 304 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 UPF3AQ9H1J1 476 aaKnown RBP17.94■□□□□ 0.46
SREBF1-222ENST00000583732 IL17RBQ9NRM6 502 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 TOMM22Q9NS69 142 aa17.94■□□□□ 0.46
SREBF1-222ENST00000583732 SOWAHBA6NEL2 793 aa17.93■□□□□ 0.46
SREBF1-222ENST00000583732 PTGS1P23219 599 aa17.93■□□□□ 0.46
SREBF1-222ENST00000583732 TBX21Q9UL17 535 aa17.93■□□□□ 0.46
SREBF1-222ENST00000583732 PRR12Q9ULL5 1215 aa17.93■□□□□ 0.46
SREBF1-222ENST00000583732 MROH7Q68CQ1 1323 aa17.93■□□□□ 0.46
SREBF1-222ENST00000583732 A0A0U1RQG5 324 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-222ENST00000583732 TIMP1P01033 207 aa17.92■□□□□ 0.46
SREBF1-222ENST00000583732 TNFAIP2Q03169 654 aa17.92■□□□□ 0.46
SREBF1-222ENST00000583732 MUM1L1Q5H9M0 696 aa17.92■□□□□ 0.46
SREBF1-222ENST00000583732 RRP12Q5JTH9 1297 aaKnown RBP17.92■□□□□ 0.46
SREBF1-222ENST00000583732 PPP4R3BQ5MIZ7 849 aa17.92■□□□□ 0.46
SREBF1-222ENST00000583732 RCSD1Q6JBY9 416 aa17.92■□□□□ 0.46
SREBF1-222ENST00000583732 MAFAQ8NHW3 353 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-222ENST00000583732 PPP1R12CQ9BZL4 782 aa17.92■□□□□ 0.46
SREBF1-222ENST00000583732 ELP1O95163 1332 aa17.92■□□□□ 0.46
SREBF1-222ENST00000583732 UNC80Q8N2C7 3258 aa17.91■□□□□ 0.46
SREBF1-222ENST00000583732 ARVCFO00192 962 aa17.91■□□□□ 0.46
SREBF1-222ENST00000583732 TKFCQ3LXA3 575 aa17.91■□□□□ 0.46
SREBF1-222ENST00000583732 NSMFQ6X4W1 530 aa17.91■□□□□ 0.46
SREBF1-222ENST00000583732 EEPD1Q7L9B9 569 aa17.91■□□□□ 0.46
SREBF1-222ENST00000583732 FBXO16Q8IX29 292 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-222ENST00000583732 EVI5LQ96CN4 794 aa17.91■□□□□ 0.46
SREBF1-222ENST00000583732 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.91■□□□□ 0.467e-14■■■□□ 16.2
SREBF1-222ENST00000583732 COL25A1Q9BXS0 654 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-222ENST00000583732 CCPG1Q9ULG6 757 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms