RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 TREML2Q5T2D2 321 aa18.92■□□□□ 0.62
CDK5RAP3-228ENST00000583363 GPAT2Q6NUI2 795 aa18.92■□□□□ 0.62
CDK5RAP3-228ENST00000583363 PRPF38AQ8NAV1 312 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP3-228ENST00000583363 RRP36Q96EU6 259 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP3-228ENST00000583363 PIGSQ96S52 555 aa18.92■□□□□ 0.62
CDK5RAP3-228ENST00000583363 DDIT3P35638 169 aa18.91■□□□□ 0.62
CDK5RAP3-228ENST00000583363 COG2Q14746 738 aa18.91■□□□□ 0.62
CDK5RAP3-228ENST00000583363 PFKFB3Q16875 520 aaPredicted RBP18.91■□□□□ 0.62
CDK5RAP3-228ENST00000583363 PIBF1Q8WXW3 757 aa18.91■□□□□ 0.62
CDK5RAP3-228ENST00000583363 WASF1Q92558 559 aa18.91■□□□□ 0.62
CDK5RAP3-228ENST00000583363 SLF1Q9BQI6 1058 aa18.91■□□□□ 0.62
CDK5RAP3-228ENST00000583363 TANGO6Q9C0B7 1094 aa18.91■□□□□ 0.62
CDK5RAP3-228ENST00000583363 PPP1R9AQ9ULJ8 1098 aa18.91■□□□□ 0.62
CDK5RAP3-228ENST00000583363 AGTPBP1Q9UPW5 1226 aa18.91■□□□□ 0.62
CDK5RAP3-228ENST00000583363 PTPRFP10586 1907 aa18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 PNMA6FA0A0J9YX94 578 aa18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 TESPA1A2RU30 521 aaPredicted RBP18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 FLOT1O75955 427 aa18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 DSG3P32926 999 aa18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 LARP1BQ659C4 914 aaKnown RBP18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 KIFC2Q96AC6 838 aa18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 AIFM3Q96NN9 605 aa18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 ALG1Q9BT22 464 aa18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 HOXC10Q9NYD6 342 aa18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 ADAMTS5Q9UNA0 930 aa18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 KIF3AQ9Y496 699 aa18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 HTTP42858 3142 aa18.9■□□□□ 0.62
CDK5RAP3-228ENST00000583363 CCL15-CCL14A0A0B4J2E2 113 aa18.89■□□□□ 0.61
CDK5RAP3-228ENST00000583363 ZBTB5O15062 677 aa18.89■□□□□ 0.61
CDK5RAP3-228ENST00000583363 SCG2P13521 617 aa18.89■□□□□ 0.61
CDK5RAP3-228ENST00000583363 CCL15Q16663 113 aa18.89■□□□□ 0.61
CDK5RAP3-228ENST00000583363 BRI3BPQ8WY22 251 aa18.89■□□□□ 0.61
CDK5RAP3-228ENST00000583363 RANBP17Q9H2T7 1088 aaKnown RBP18.89■□□□□ 0.61
CDK5RAP3-228ENST00000583363 MANSC4A6NHS7 340 aaPredicted RBP18.88■□□□□ 0.61
CDK5RAP3-228ENST00000583363 FDX1P10109 184 aa18.88■□□□□ 0.61
CDK5RAP3-228ENST00000583363 PDCP20941 246 aa18.88■□□□□ 0.61
CDK5RAP3-228ENST00000583363 SYT1P21579 422 aa18.88■□□□□ 0.61
CDK5RAP3-228ENST00000583363 SNAP25P60880 206 aa18.88■□□□□ 0.61
CDK5RAP3-228ENST00000583363 PABPC4Q13310 644 aaKnown RBP eCLIP18.88■□□□□ 0.61
CDK5RAP3-228ENST00000583363 CDC37Q16543 378 aaPredicted RBP18.88■□□□□ 0.61
CDK5RAP3-228ENST00000583363 QRICH1Q2TAL8 776 aa18.88■□□□□ 0.61
CDK5RAP3-228ENST00000583363 HOMER1Q86YM7 354 aa18.88■□□□□ 0.61
CDK5RAP3-228ENST00000583363 RGS22Q8NE09 1264 aa18.88■□□□□ 0.61
CDK5RAP3-228ENST00000583363 SEC63Q9UGP8 760 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-228ENST00000583363 BTBD19C9JJ37 291 aa18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 ALDH1A1P00352 501 aa18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 OSBPP22059 807 aa18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 SAMD1Q6SPF0 538 aaPredicted RBP18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 ANKRD23Q86SG2 305 aa18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 MYPNQ86TC9 1320 aa18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 IFNL1Q8IU54 200 aa18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 C8orf76Q96K31 380 aa18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 P2RX7Q99572 595 aaKnown RBP18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 PTPN18Q99952 460 aa18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 SLC38A10Q9HBR0 1119 aa18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 SLC45A1Q9Y2W3 748 aa18.87■□□□□ 0.61
CDK5RAP3-228ENST00000583363 IGF2BP3O00425 579 aaKnown RBP eCLIP18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 VWA5AO00534 786 aa18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 PPP1R11O60927 126 aaPredicted RBP18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 ZBED4O75132 1171 aa18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 PDIA4P13667 645 aaKnown RBP18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 INHBEP58166 350 aa18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 WWC2Q6AWC2 1192 aa18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 FBXO18Q8NFZ0 1043 aa18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 SHISA4Q96DD7 197 aa18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 ATG4CQ96DT6 458 aa18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 ASCC2Q9H1I8 757 aaPredicted RBP18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 SH3GLB2Q9NR46 395 aa18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 GJB4Q9NTQ9 266 aa18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 BARHL2Q9NY43 387 aa18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 LOC285556D6RIA3 1793 aa18.86■□□□□ 0.61
CDK5RAP3-228ENST00000583363 RLFQ13129 1914 aa18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 SPDYE16A6NNV3 312 aaPredicted RBP18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 STX6O43752 255 aa18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 IRX3P78415 501 aaPredicted RBP18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 OTUD7BQ6GQQ9 843 aa18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 REPS2Q8NFH8 660 aa18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 GPKOWQ92917 476 aaPredicted RBP eCLIP18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 AMNQ9BXJ7 453 aa18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 VPS54Q9P1Q0 977 aa18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 CIZ1Q9ULV3 898 aaPredicted RBP18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 MKI67P46013 3256 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 CENPFP49454 3210 aa18.85■□□□□ 0.61
CDK5RAP3-228ENST00000583363 MYH6P13533 1939 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 ZNF536O15090 1300 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 hCG_1984214I3L0E3 225 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 STXBP3O00186 592 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 PDHXO00330 501 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 XBP1P17861 261 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 FOSBP53539 338 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 KRT40Q6A162 431 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 CCDC174Q6PII3 467 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 POTEEQ6S8J3 1075 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 LBX2Q6XYB7 198 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 OTOP1Q7RTM1 612 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 HEATR3Q7Z4Q2 680 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 FBXO11Q86XK2 927 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 FAM177A1Q8N128 213 aaPredicted RBP18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 FAM43AQ8N2R8 423 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 ZNF713Q8N859 430 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms