RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 LRRC3Q9BY71 257 aa5.96□□□□□ -1.46
PTPRM-215ENST00000583289 PTPRTO14522 1441 aa5.96□□□□□ -1.46
PTPRM-215ENST00000583289 SCAPERQ9BY12 1400 aa5.96□□□□□ -1.46
PTPRM-215ENST00000583289 TRPM1Q7Z4N2 1603 aa5.96□□□□□ -1.46
PTPRM-215ENST00000583289 PRDM15P57071 1507 aaPredicted RBP5.95□□□□□ -1.46
PTPRM-215ENST00000583289 MINDY4BA8MYZ0 360 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 RBAK-RBAKDNI3L0D1 243 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 TMEM253P0C7T8 217 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 TAGLNQ01995 201 aaKnown RBP5.95□□□□□ -1.46
PTPRM-215ENST00000583289 CHRNEQ04844 493 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 DUSP4Q13115 394 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 CLEC16AQ2KHT3 1053 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 BCORL1Q5H9F3 1711 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 ERMP1Q7Z2K6 904 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 LRRC56Q8IYG6 542 aaPredicted RBP5.95□□□□□ -1.46
PTPRM-215ENST00000583289 ENOX1Q8TC92 643 aaKnown RBP5.95□□□□□ -1.46
PTPRM-215ENST00000583289 SLC26A8Q96RN1 970 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 ASCC2Q9H1I8 757 aaPredicted RBP5.95□□□□□ -1.46
PTPRM-215ENST00000583289 SLC6A17Q9H1V8 727 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 CWC22Q9HCG8 908 aaKnown RBP5.95□□□□□ -1.46
PTPRM-215ENST00000583289 KCNQ5Q9NR82 932 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 KBTBD4Q9NVX7 518 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 NUDCQ9Y266 331 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 ABCA9Q8IUA7 1624 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 FANCAO15360 1455 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 PLA2R1Q13018 1463 aa5.95□□□□□ -1.46
PTPRM-215ENST00000583289 LRPPRCP42704 1394 aaKnown RBP5.94□□□□□ -1.46
PTPRM-215ENST00000583289 RGS13O14921 159 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 LRRN2O75325 713 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 C1QTNF9P0C862 333 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 MED14OSP0DP75 135 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 GARTP22102 1010 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 CFPP27918 469 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 GBP1P32455 592 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 IRF2BP1Q8IU81 584 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 SPPL2CQ8IUH8 684 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 KIF2CQ99661 725 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 RNF32Q9H0A6 362 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 KNSTRNQ9Y448 316 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 A2MP01023 1474 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 RPGRIP1LQ68CZ1 1315 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 KIAA1210Q9ULL0 1709 aa5.94□□□□□ -1.46
PTPRM-215ENST00000583289 PARD3Q8TEW0 1356 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 NPC1L1Q9UHC9 1359 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 CFAP74Q9C0B2 1584 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 TRAPPC8Q9Y2L5 1435 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 DNAJA2O60884 412 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 KRT1P04264 644 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 RAG1P15918 1043 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 GLDCP23378 1020 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 EIF4A3P38919 411 aaKnown RBP5.93□□□□□ -1.46
PTPRM-215ENST00000583289 CCDC184Q52MB2 194 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 SIAH1Q8IUQ4 282 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 AFAP1Q8N556 730 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 ANKS4BQ8N8V4 417 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 FBXO27Q8NI29 283 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 PUS7Q96PZ0 661 aaKnown RBP5.93□□□□□ -1.46
PTPRM-215ENST00000583289 TESK2Q96S53 571 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.93□□□□□ -1.46
PTPRM-215ENST00000583289 SP110Q9HB58 689 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 GMIPQ9P107 970 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 TET3O43151 1660 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 TRPM2O94759 1503 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 RNF123Q5XPI4 1314 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 ERCC6L2Q5T890 1561 aa5.93□□□□□ -1.46
PTPRM-215ENST00000583289 DEPDC5O75140 1603 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 ADGRL1O94910 1474 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 ZNF518AQ6AHZ1 1483 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 SCAF11Q99590 1463 aaKnown RBP5.92□□□□□ -1.46
PTPRM-215ENST00000583289 SHISA3A0PJX4 238 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 TCAF2A6NFQ2 919 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 KIF3BO15066 747 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 ATE1O95260 518 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 TRHRP34981 398 aaPredicted RBP5.92□□□□□ -1.46
PTPRM-215ENST00000583289 TEKQ02763 1124 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 RAD51AP2Q09MP3 1159 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 NMIQ13287 307 aaPredicted RBP5.92□□□□□ -1.46
PTPRM-215ENST00000583289 SNX17Q15036 470 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 FBXL19Q6PCT2 694 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 RNF111Q6ZNA4 994 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 HS2ST1Q7LGA3 356 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 SYTL5Q8TDW5 730 aaPredicted RBP5.92□□□□□ -1.46
PTPRM-215ENST00000583289 VWCEQ96DN2 955 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 GZF1Q9H116 711 aaPredicted RBP5.92□□□□□ -1.46
PTPRM-215ENST00000583289 CD320Q9NPF0 282 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 PCDHB14Q9Y5E9 798 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 ATP7AQ04656 1500 aa5.92□□□□□ -1.46
PTPRM-215ENST00000583289 ASXL2Q76L83 1435 aa5.91□□□□□ -1.46
PTPRM-215ENST00000583289 CEP152O94986 1710 aa5.91□□□□□ -1.46
PTPRM-215ENST00000583289 ZFYVE16Q7Z3T8 1539 aa5.91□□□□□ -1.46
PTPRM-215ENST00000583289 SLC22A31A6NKX4 558 aa5.91□□□□□ -1.46
PTPRM-215ENST00000583289 TLR3O15455 904 aaKnown RBP5.91□□□□□ -1.46
PTPRM-215ENST00000583289 GREM1O60565 184 aa5.91□□□□□ -1.46
PTPRM-215ENST00000583289 ARSHQ5FYA8 562 aa5.91□□□□□ -1.46
PTPRM-215ENST00000583289 ATG14Q6ZNE5 492 aa5.91□□□□□ -1.46
PTPRM-215ENST00000583289 C1QL4Q86Z23 238 aa5.91□□□□□ -1.46
PTPRM-215ENST00000583289 BCL2L13Q9BXK5 485 aa5.91□□□□□ -1.46
PTPRM-215ENST00000583289 C19orf44Q9H6X5 657 aa5.91□□□□□ -1.46
PTPRM-215ENST00000583289 PANK3Q9H999 370 aa5.91□□□□□ -1.46
PTPRM-215ENST00000583289 BRMS1Q9HCU9 246 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms