RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
SENP3-208ENST00000583277 FDX1P10109 184 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 FBXO11Q86XK2 927 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 BLIDQ8IZY5 108 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 C2orf69Q8N8R5 385 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 TMEM87AQ8NBN3 555 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 OTUD5Q96G74 571 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 GPBP1L1Q9HC44 474 aaPredicted RBP16.81■□□□□ 0.28
SENP3-208ENST00000583277 FLOT1O75955 427 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 CELF2O95319 508 aaKnown RBP16.81■□□□□ 0.28
SENP3-208ENST00000583277 ADCY7P51828 1080 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 FAM173BQ6P4H8 233 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 TEX2Q8IWB9 1127 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 PROCA1Q8NCQ7 364 aaPredicted RBP16.81■□□□□ 0.28
SENP3-208ENST00000583277 PNMA2Q9UL42 364 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 PPP1R9AQ9ULJ8 1098 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 KCNH4Q9UQ05 1017 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 CNPY2Q9Y2B0 182 aa16.81■□□□□ 0.28
SENP3-208ENST00000583277 RLFQ13129 1914 aa16.8■□□□□ 0.28
SENP3-208ENST00000583277 A0A0G2JLL6 359 aaPredicted RBP16.8■□□□□ 0.28
SENP3-208ENST00000583277 SMCO2A6NFE2 343 aa16.8■□□□□ 0.28
SENP3-208ENST00000583277 FIBPO43427 364 aa16.8■□□□□ 0.28
SENP3-208ENST00000583277 NR5A1Q13285 461 aa16.8■□□□□ 0.28
SENP3-208ENST00000583277 RILPL1Q5EBL4 403 aa16.8■□□□□ 0.28
SENP3-208ENST00000583277 PRRT2Q7Z6L0 340 aaPredicted RBP16.8■□□□□ 0.28
SENP3-208ENST00000583277 OXER1Q8TDS5 423 aa16.8■□□□□ 0.28
SENP3-208ENST00000583277 TNFRSF25Q93038 417 aa16.8■□□□□ 0.28
SENP3-208ENST00000583277 COA7Q96BR5 231 aa16.8■□□□□ 0.28
SENP3-208ENST00000583277 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
SENP3-208ENST00000583277 FBXO28Q9NVF7 368 aa16.8■□□□□ 0.28
SENP3-208ENST00000583277 PCDHA1Q9Y5I3 950 aa16.8■□□□□ 0.28
SENP3-208ENST00000583277 MYPNQ86TC9 1320 aa16.79■□□□□ 0.28
SENP3-208ENST00000583277 IRF6O14896 467 aa16.79■□□□□ 0.28
SENP3-208ENST00000583277 ITGBL1O95965 494 aaPredicted RBP16.79■□□□□ 0.28
SENP3-208ENST00000583277 DGKZQ13574 1117 aa16.79■□□□□ 0.28
SENP3-208ENST00000583277 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
SENP3-208ENST00000583277 CUL5Q93034 780 aa16.79■□□□□ 0.28
SENP3-208ENST00000583277 SLC10A4Q96EP9 437 aa16.79■□□□□ 0.28
SENP3-208ENST00000583277 CHAMP1Q96JM3 812 aa16.79■□□□□ 0.28
SENP3-208ENST00000583277 POLR3EQ9NVU0 708 aa16.79■□□□□ 0.28
SENP3-208ENST00000583277 NOL7Q9UMY1 257 aaKnown RBP16.79■□□□□ 0.28
SENP3-208ENST00000583277 ELP1O95163 1332 aa16.79■□□□□ 0.28
SENP3-208ENST00000583277 RBBP6Q7Z6E9 1792 aaKnown RBP16.78■□□□□ 0.28
SENP3-208ENST00000583277 USP17L15C9J2P7 530 aa16.78■□□□□ 0.28
SENP3-208ENST00000583277 USP17L13C9JLJ4 530 aa16.78■□□□□ 0.28
SENP3-208ENST00000583277 USP17L11C9JVI0 530 aa16.78■□□□□ 0.28
SENP3-208ENST00000583277 USP17L18D6R9N7 530 aa16.78■□□□□ 0.28
SENP3-208ENST00000583277 USP17L22D6RA61 530 aa16.78■□□□□ 0.28
SENP3-208ENST00000583277 USP17L17D6RBQ6 530 aa16.78■□□□□ 0.28
SENP3-208ENST00000583277 USP17L19D6RCP7 530 aa16.78■□□□□ 0.28
SENP3-208ENST00000583277 USP17L20D6RJB6 530 aa16.78■□□□□ 0.28
SENP3-208ENST00000583277 M0R2N6 131 aa16.78■□□□□ 0.28
SENP3-208ENST00000583277 MRPL12P52815 198 aaKnown RBP16.78■□□□□ 0.28
SENP3-208ENST00000583277 FMR1Q06787 632 aaKnown RBP eCLIP16.78■□□□□ 0.28
SENP3-208ENST00000583277 USP17L24Q0WX57 530 aa16.78■□□□□ 0.28
SENP3-208ENST00000583277 REXO1Q8N1G1 1221 aaKnown RBP16.78■□□□□ 0.28
SENP3-208ENST00000583277 RIC8AQ9NPQ8 531 aa16.78■□□□□ 0.28
SENP3-208ENST00000583277 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.78■□□□□ 0.28
SENP3-208ENST00000583277 COL11A1P12107 1806 aaPredicted RBP16.77■□□□□ 0.28
SENP3-208ENST00000583277 CCDC194A0A1B0GVG4 234 aa16.77■□□□□ 0.28
SENP3-208ENST00000583277 TRAPPC10P48553 1259 aa16.77■□□□□ 0.28
SENP3-208ENST00000583277 CATSPERGQ6ZRH7 1159 aa16.77■□□□□ 0.28
SENP3-208ENST00000583277 KRT25Q7Z3Z0 450 aa16.77■□□□□ 0.28
SENP3-208ENST00000583277 SPATA32Q96LK8 384 aa16.77■□□□□ 0.28
SENP3-208ENST00000583277 USP28Q96RU2 1077 aa16.77■□□□□ 0.28
SENP3-208ENST00000583277 SLC38A10Q9HBR0 1119 aa16.77■□□□□ 0.28
SENP3-208ENST00000583277 RTEL1Q9NZ71 1219 aa16.77■□□□□ 0.28
SENP3-208ENST00000583277 CTDP1Q9Y5B0 961 aaPredicted RBP16.77■□□□□ 0.28
SENP3-208ENST00000583277 ZBED4O75132 1171 aa16.77■□□□□ 0.27
SENP3-208ENST00000583277 YEATS4O95619 227 aa16.77■□□□□ 0.27
SENP3-208ENST00000583277 ICAM1P05362 532 aa16.77■□□□□ 0.27
SENP3-208ENST00000583277 SNAP25P60880 206 aa16.77■□□□□ 0.27
SENP3-208ENST00000583277 SNAPC2Q13487 334 aa16.77■□□□□ 0.27
SENP3-208ENST00000583277 USH1GQ495M9 461 aa16.77■□□□□ 0.27
SENP3-208ENST00000583277 MCTP2Q6DN12 878 aa16.77■□□□□ 0.27
SENP3-208ENST00000583277 CCDC174Q6PII3 467 aa16.77■□□□□ 0.27
SENP3-208ENST00000583277 SAMD1Q6SPF0 538 aaPredicted RBP16.77■□□□□ 0.27
SENP3-208ENST00000583277 FASTKD5Q7L8L6 764 aaKnown RBP16.77■□□□□ 0.27
SENP3-208ENST00000583277 LEO1Q8WVC0 666 aaPredicted RBP16.77■□□□□ 0.27
SENP3-208ENST00000583277 PSTPIP2Q9H939 334 aa16.77■□□□□ 0.27
SENP3-208ENST00000583277 TFIP11Q9UBB9 837 aaKnown RBP16.77■□□□□ 0.27
SENP3-208ENST00000583277 PCDHA6Q9UN73 950 aa16.77■□□□□ 0.27
SENP3-208ENST00000583277 PCDHA8Q9Y5H6 950 aa16.77■□□□□ 0.27
SENP3-208ENST00000583277 ABCB11O95342 1321 aa16.76■□□□□ 0.27
SENP3-208ENST00000583277 A0A0G2JMZ2 1700 aa16.76■□□□□ 0.27
SENP3-208ENST00000583277 PRPF40AO75400 957 aaKnown RBP16.76■□□□□ 0.27
SENP3-208ENST00000583277 NASPP49321 788 aaPredicted RBP16.76■□□□□ 0.27
SENP3-208ENST00000583277 COG2Q14746 738 aa16.76■□□□□ 0.27
SENP3-208ENST00000583277 ANO1Q5XXA6 986 aa16.76■□□□□ 0.27
SENP3-208ENST00000583277 GADL1Q6ZQY3 521 aa16.76■□□□□ 0.27
SENP3-208ENST00000583277 PIK3AP1Q6ZUJ8 805 aa16.76■□□□□ 0.27
SENP3-208ENST00000583277 GDPD2Q9HCC8 539 aa16.76■□□□□ 0.27
SENP3-208ENST00000583277 LMBRD1Q9NUN5 540 aa16.76■□□□□ 0.27
SENP3-208ENST00000583277 HOXC10Q9NYD6 342 aa16.76■□□□□ 0.27
SENP3-208ENST00000583277 MRPL11Q9Y3B7 192 aaKnown RBP16.76■□□□□ 0.27
SENP3-208ENST00000583277 SMCHD1A6NHR9 2005 aa16.75■□□□□ 0.27
SENP3-208ENST00000583277 VWA5AO00534 786 aa16.75■□□□□ 0.27
SENP3-208ENST00000583277 HOXA7P31268 230 aaPredicted RBP16.75■□□□□ 0.27
SENP3-208ENST00000583277 DSG3P32926 999 aa16.75■□□□□ 0.27
SENP3-208ENST00000583277 OAZ1P54368 228 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms