RNA–Protein interactions for RNA: ENST00000583070.5

NUP85-220, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-220ENST00000583070 SLC35G1Q2M3R5 365 aa12.5□□□□□ -0.41
NUP85-220ENST00000583070 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
NUP85-220ENST00000583070 ADGRF4Q8IZF3 695 aa12.5□□□□□ -0.41
NUP85-220ENST00000583070 ZNF274Q96GC6 653 aaPredicted RBP12.5□□□□□ -0.41
NUP85-220ENST00000583070 SPZ1Q9BXG8 430 aa12.5□□□□□ -0.41
NUP85-220ENST00000583070 ARHGAP39Q9C0H5 1083 aa12.5□□□□□ -0.41
NUP85-220ENST00000583070 CPVLQ9H3G5 476 aa12.5□□□□□ -0.41
NUP85-220ENST00000583070 MROH8Q9H579 483 aa12.5□□□□□ -0.41
NUP85-220ENST00000583070 JMJD4Q9H9V9 463 aa12.5□□□□□ -0.41
NUP85-220ENST00000583070 RBM28Q9NW13 759 aaKnown RBP12.5□□□□□ -0.41
NUP85-220ENST00000583070 PNMA2Q9UL42 364 aa12.5□□□□□ -0.41
NUP85-220ENST00000583070 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
NUP85-220ENST00000583070 GOLGA8BA8MQT2 603 aa12.49□□□□□ -0.41
NUP85-220ENST00000583070 CYTH3O43739 400 aa12.49□□□□□ -0.41
NUP85-220ENST00000583070 RXRAP19793 462 aa12.49□□□□□ -0.41
NUP85-220ENST00000583070 PLS1Q14651 629 aa12.49□□□□□ -0.41
NUP85-220ENST00000583070 SNRNP48Q6IEG0 339 aaKnown RBP12.49□□□□□ -0.41
NUP85-220ENST00000583070 TMTC3Q6ZXV5 915 aa12.49□□□□□ -0.41
NUP85-220ENST00000583070 NBPF11Q86T75 865 aa12.49□□□□□ -0.41
NUP85-220ENST00000583070 UBA5Q9GZZ9 404 aa12.49□□□□□ -0.41
NUP85-220ENST00000583070 RAVER2Q9HCJ3 691 aaKnown RBP12.49□□□□□ -0.41
NUP85-220ENST00000583070 FAM217BQ9NTX9 383 aaPredicted RBP12.49□□□□□ -0.41
NUP85-220ENST00000583070 CTDP1Q9Y5B0 961 aaPredicted RBP12.49□□□□□ -0.41
NUP85-220ENST00000583070 CCDC196A0A1B0GTZ2 297 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 GOLGA8AA7E2F4 631 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 TNPO2O14787 897 aaKnown RBP12.48□□□□□ -0.41
NUP85-220ENST00000583070 PLEKHA8P1O95397 391 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 ERCC3P19447 782 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 PDIA3P30101 505 aaKnown RBP12.48□□□□□ -0.41
NUP85-220ENST00000583070 METAP2P50579 478 aaKnown RBP eCLIP12.48□□□□□ -0.41
NUP85-220ENST00000583070 AK2P54819 239 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 FUT2Q10981 343 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 RABEP1Q15276 862 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 CDC37Q16543 378 aaPredicted RBP12.48□□□□□ -0.41
NUP85-220ENST00000583070 RTN1Q16799 776 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 TKFCQ3LXA3 575 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 OTOP1Q7RTM1 612 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 GPR142Q7Z601 462 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 CTU1Q7Z7A3 348 aaKnown RBP12.48□□□□□ -0.41
NUP85-220ENST00000583070 RAB11FIP4Q86YS3 637 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 CCDC144CPQ8IYA2 1237 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 CPXCR1Q8N123 301 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 COA7Q96BR5 231 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 EFCC1Q9HA90 598 aa12.48□□□□□ -0.41
NUP85-220ENST00000583070 CNTNAP5Q8WYK1 1306 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 ZBTB5O15062 677 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 STRNO43815 780 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 FMNL1O95466 1100 aaPredicted RBP12.47□□□□□ -0.41
NUP85-220ENST00000583070 CDC27P30260 824 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 PRMT2P55345 433 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 SNAP25P60880 206 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 QRICH1Q2TAL8 776 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 CCDC174Q6PII3 467 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 PLEKHH3Q7Z736 793 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 CCAR1Q8IX12 1150 aaKnown RBP12.47□□□□□ -0.41
NUP85-220ENST00000583070 ABRAQ8N0Z2 381 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 SRBD1Q8N5C6 995 aaKnown RBP12.47□□□□□ -0.41
NUP85-220ENST00000583070 CHST13Q8NET6 341 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 AGBL1Q96MI9 1066 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 SRRDQ9UH36 339 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 FBXO40Q9UH90 709 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 CCPG1Q9ULG6 757 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 RIPK3Q9Y572 518 aa12.47□□□□□ -0.41
NUP85-220ENST00000583070 KIAA0100Q14667 2235 aaKnown RBP12.47□□□□□ -0.41
NUP85-220ENST00000583070 PNMA6FA0A0J9YX94 578 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 SLC15A5A6NIM6 579 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
NUP85-220ENST00000583070 PTPREP23469 700 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 HOXD10P28358 340 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 GRB14Q14449 540 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 NTRK3Q16288 839 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 MORN1Q5T089 497 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 NCAPG2Q86XI2 1143 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 SOCS4Q8WXH5 440 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 USP6NLQ92738 828 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 PIGSQ96S52 555 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 ACAD9Q9H845 621 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 GJD2Q9UKL4 321 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 TPCN1Q9ULQ1 816 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 NAP1L2Q9ULW6 460 aaPredicted RBP12.46□□□□□ -0.41
NUP85-220ENST00000583070 TRIM17Q9Y577 477 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 IVNS1ABPQ9Y6Y0 642 aa12.46□□□□□ -0.41
NUP85-220ENST00000583070 LRRC37A2A6NM11 1700 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 ABCB11O95342 1321 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 PFKFB2O60825 505 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 PPP1R11O60927 126 aaPredicted RBP12.45□□□□□ -0.42
NUP85-220ENST00000583070 ALAS1P13196 640 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 ADD1P35611 737 aaKnown RBP12.45□□□□□ -0.42
NUP85-220ENST00000583070 PRKCZQ05513 592 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 TRAF1Q13077 416 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 IRF5Q13568 498 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 PKN2Q16513 984 aaKnown RBP12.45□□□□□ -0.42
NUP85-220ENST00000583070 FBXO11Q86XK2 927 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 RRP36Q96EU6 259 aaKnown RBP12.45□□□□□ -0.42
NUP85-220ENST00000583070 TRERF1Q96PN7 1200 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 NUDT12Q9BQG2 462 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 AMNQ9BXJ7 453 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 MAF1Q9H063 256 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 VAT1LQ9HCJ6 419 aa12.45□□□□□ -0.42
NUP85-220ENST00000583070 RNF146Q9NTX7 359 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms