RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 NEK9Q8TD19 979 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 PAGE5Q96GU1 130 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 PYCARDQ9ULZ3 195 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 FRMD4BQ9Y2L6 1034 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 MRPL11Q9Y3B7 192 aaKnown RBP6.5□□□□□ -1.37
RTTN-209ENST00000583043 SPATA31A5Q5VU36 1347 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 SPATA31A7Q8IWB4 1347 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 SLC1A4P43007 532 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 PPFIA1Q13136 1202 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 TNFAIP1Q13829 316 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 GLE1Q53GS7 698 aaKnown RBP6.5□□□□□ -1.37
RTTN-209ENST00000583043 GBP6Q6ZN66 633 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 MCF2L2Q86YR7 1114 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 LIMA1Q9UHB6 759 aaKnown RBP6.5□□□□□ -1.37
RTTN-209ENST00000583043 HPSEQ9Y251 543 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.5□□□□□ -1.37
RTTN-209ENST00000583043 COL4A3BPQ9Y5P4 624 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 NPR1P16066 1061 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 HSPA6P17066 643 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 LONRF3Q496Y0 759 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 FOXR2Q6PJQ5 311 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 ANKS1AQ92625 1134 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 ARID3AQ99856 593 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 MMRN2Q9H8L6 949 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 DCP1AQ9NPI6 582 aaPredicted RBP6.5□□□□□ -1.37
RTTN-209ENST00000583043 DISC1Q9NRI5 854 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 SYNPO2Q9UMS6 1093 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 HYOU1Q9Y4L1 999 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 PCDHB13Q9Y5F0 798 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 SAR1BQ9Y6B6 198 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 MROH7-TTC4A0A0A0MT08 1334 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 CBX1P83916 185 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 ERFEQ4G0M1 354 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 CFAP221Q4G0U5 840 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 AMNQ9BXJ7 453 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 GINM1Q9NU53 330 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 DIS3Q9Y2L1 958 aaKnown RBP6.5□□□□□ -1.37
RTTN-209ENST00000583043 EPN1Q9Y6I3 576 aaPredicted RBP6.5□□□□□ -1.37
RTTN-209ENST00000583043 PNMA6FA0A0J9YX94 578 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 TRAF5O00463 557 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 RFX1P22670 979 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 SFMBT2Q5VUG0 894 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 SAMD3Q8N6K7 520 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 WDR11Q9BZH6 1224 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 CHD2O14647 1828 aaKnown RBP6.5□□□□□ -1.37
RTTN-209ENST00000583043 NEDD4P46934 1319 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 H0YIN7 160 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 TBX3O15119 743 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 ANTXR2P58335 489 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 FKBP3Q00688 224 aaKnown RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 MECOMQ03112 1051 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 PAK2Q13177 524 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 DHX40Q8IX18 779 aaKnown RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 MSANTD4Q8NCY6 345 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 KIFAP3Q92845 792 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 CCDC77Q9BR77 488 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 MYL10Q9BUA6 226 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 DNAJC5Q9H3Z4 198 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 VAT1LQ9HCJ6 419 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 PARP2Q9UGN5 583 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 FBXO2Q9UK22 296 aaPredicted RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 PARP4Q9UKK3 1724 aaKnown RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 MTUS1Q9ULD2 1270 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 CTIFO43310 598 aaKnown RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 GFPT2O94808 682 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 MAGEA1P43355 309 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 HDLBPQ00341 1268 aaKnown RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 ISM2Q6H9L7 571 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 CYB5R4Q7L1T6 521 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 PODNQ7Z5L7 613 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 APBB1IPQ7Z5R6 666 aaPredicted RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 SYCP3Q8IZU3 236 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 TGFBRAP1Q8WUH2 860 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 LARP4BQ92615 738 aaKnown RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 FEZ2Q9UHY8 353 aaPredicted RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 FDPSP14324 419 aaKnown RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 SMTNP53814 917 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 STX17P56962 302 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 ASIC2Q16515 512 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 RUFY4Q6ZNE9 571 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 UNC13DQ70J99 1090 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 FAM160B2Q86V87 743 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 BARHL2Q9NY43 387 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 H0YHG0 523 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 MFAP3LO75121 409 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 KIAA0753Q2KHM9 967 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 FAM26FQ5R3K3 315 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 SP8Q8IXZ3 490 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 RNF10Q8N5U6 811 aaKnown RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 ENAHQ8N8S7 591 aaPredicted RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 PSTPIP2Q9H939 334 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 SERPINB13Q9UIV8 391 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 A0A1B0GTH6 734 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 WDHD1O75717 1129 aaPredicted RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 BCRP11274 1271 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 MUTP22033 750 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 ATP5DP30049 168 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 C12orf60Q5U649 245 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 MOXD1Q6UVY6 613 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 FAM20AQ96MK3 541 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms