RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 SNAP25P60880 206 aa10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 HERVK_113P62684 666 aa10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 FUT2Q10981 343 aa10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 SLC35G1Q2M3R5 365 aa10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 QRICH1Q2TAL8 776 aa10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 HEATR3Q7Z4Q2 680 aa10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 IFNL1Q8IU54 200 aa10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 WASF1Q92558 559 aa10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 INTS4Q96HW7 963 aaKnown RBP10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PAGR1Q9BTK6 254 aa10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 RIOX1Q9H6W3 641 aa10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 HOXC10Q9NYD6 342 aa10.52□□□□□ -0.73
PDLIM1P2-201ENST00000582923 RLFQ13129 1914 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PNMA6FA0A0J9YX94 578 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 VWA5AO00534 786 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ZBTB5O15062 677 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PRPF3O43395 683 aaKnown RBP10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 FDX1P10109 184 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 SCG2P13521 617 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 GJB2P29033 226 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PLS1Q14651 629 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 TAF1CQ15572 869 aaPredicted RBP10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 REM2Q8IYK8 340 aaPredicted RBP10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 MB21D1Q8N884 522 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 GTF3C2Q8WUA4 911 aaPredicted RBP10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 GPKOWQ92917 476 aaPredicted RBP eCLIP10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ZIC5Q96T25 663 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 P2RX7Q99572 595 aaKnown RBP10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PTPN18Q99952 460 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 RANBP17Q9H2T7 1088 aaKnown RBP10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 SLC38A10Q9HBR0 1119 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ZCCHC17Q9NP64 241 aaKnown RBP10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 CCPG1Q9ULG6 757 aa10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 COL11A1P12107 1806 aaPredicted RBP10.51□□□□□ -0.73
PDLIM1P2-201ENST00000582923 RBBP6Q7Z6E9 1792 aaKnown RBP10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 hCG_1984214I3L0E3 225 aa10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 XBP1P17861 261 aa10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 TRAF1Q13077 416 aa10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 TRIM29Q14134 588 aa10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PFKFB3Q16875 520 aaPredicted RBP10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 USH1GQ495M9 461 aa10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 FBXO11Q86XK2 927 aa10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 CPXCR1Q8N123 301 aa10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ZNF713Q8N859 430 aaPredicted RBP10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ALG1Q9BT22 464 aa10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 AMNQ9BXJ7 453 aa10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 RAVER2Q9HCJ3 691 aaKnown RBP10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PNMA2Q9UL42 364 aa10.5□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ICAM1P05362 532 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ALAS1P13196 640 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 FDPSP14324 419 aaKnown RBP10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 TAL1P17542 331 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 MAP2K2P36507 400 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 TM4SF4P48230 202 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 GCLCP48506 637 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 OAZ1P54368 228 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 NAPAP54920 295 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 WWC2Q6AWC2 1192 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 SNRNP48Q6IEG0 339 aaKnown RBP10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 LBX2Q6XYB7 198 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 CCDC148Q8NFR7 591 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 CCDC12Q8WUD4 166 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 MTMR8Q96EF0 704 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 C8orf76Q96K31 380 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 AIFM3Q96NN9 605 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 IPO9Q96P70 1041 aaKnown RBP10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 TEX13BQ9BXU2 312 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ZFYVE28Q9HCC9 887 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 HOMER2Q9NSB8 354 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PCDHA1Q9Y5I3 950 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ABCB11O95342 1321 aa10.49□□□□□ -0.73
PDLIM1P2-201ENST00000582923 H3BQV1 296 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 STXBP3O00186 592 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PPP1R11O60927 126 aaPredicted RBP10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PDCP20941 246 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 CRHR2Q13324 411 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 TMEM132BQ14DG7 1078 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PKN1Q16512 942 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 IFFO2Q5TF58 517 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PPP1R18Q6NYC8 613 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ANKRD13CQ8N6S4 541 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 REPS2Q8NFH8 660 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 COA7Q96BR5 231 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 AGBL1Q96MI9 1066 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 CWC22Q9HCG8 908 aaKnown RBP10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 VPS54Q9P1Q0 977 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 BTBD7Q9P203 1132 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ADAMTS5Q9UNA0 930 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 RABGAP1Q9Y3P9 1069 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ZNF536O15090 1300 aa10.48□□□□□ -0.73
PDLIM1P2-201ENST00000582923 VPS37CA5D8V6 355 aaPredicted RBP10.47□□□□□ -0.73
PDLIM1P2-201ENST00000582923 PEX10O60683 326 aa10.47□□□□□ -0.73
PDLIM1P2-201ENST00000582923 COPB2P35606 906 aa10.47□□□□□ -0.73
PDLIM1P2-201ENST00000582923 STAT3P40763 770 aa10.47□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ADCY7P51828 1080 aa10.47□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ERVK-9P63128 1117 aa10.47□□□□□ -0.73
PDLIM1P2-201ENST00000582923 ERVK-24P63145 666 aa10.47□□□□□ -0.73
PDLIM1P2-201ENST00000582923 CCNA1P78396 465 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms