RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 RPUSD2Q8IZ73 545 aaKnown RBP7.58□□□□□ -1.2
TVP23B-210ENST00000582288 SLC43A3Q8NBI5 491 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 SNX27Q96L92 541 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 UPF3AQ9H1J1 476 aaKnown RBP7.58□□□□□ -1.2
TVP23B-210ENST00000582288 C11orf16Q9NQ32 467 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 YBX2Q9Y2T7 364 aaKnown RBP7.58□□□□□ -1.2
TVP23B-210ENST00000582288 TMX2Q9Y320 296 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 MTCH2Q9Y6C9 303 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 SLC4A7Q9Y6M7 1214 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 MYH1P12882 1939 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 DNAJC25-GNG10A0A024R161 153 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.57□□□□□ -1.2
TVP23B-210ENST00000582288 SMIM22K7EJ46 135 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 SNAI1O95863 264 aaPredicted RBP7.57□□□□□ -1.2
TVP23B-210ENST00000582288 PGK2P07205 417 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 ACRP10323 421 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 STAT3P40763 770 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 PLCD1P51178 756 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 DYNLL1P63167 89 aaKnown RBP7.57□□□□□ -1.2
TVP23B-210ENST00000582288 TTC39AQ5SRH9 613 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.57□□□□□ -1.2
TVP23B-210ENST00000582288 ALYREFQ86V81 257 aaKnown RBP7.57□□□□□ -1.2
TVP23B-210ENST00000582288 MAGEB6Q8N7X4 407 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 ARHGAP45Q92619 1136 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 HLA-CQ95604 372 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 ATG4CQ96DT6 458 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 ZFP91Q96JP5 570 aaPredicted RBP7.57□□□□□ -1.2
TVP23B-210ENST00000582288 MEIS3Q99687 375 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 ABHD16BQ9H3Z7 469 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 VCPKMTQ9H867 229 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 ARHGEF10LQ9HCE6 1279 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 SMC4Q9NTJ3 1288 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 LMCD1Q9NZU5 365 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 SWAP70Q9UH65 585 aa7.57□□□□□ -1.2
TVP23B-210ENST00000582288 ZNF214Q9UL59 606 aaPredicted RBP7.57□□□□□ -1.2
TVP23B-210ENST00000582288 LRRC37A2A6NM11 1700 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 BHMG1C9JSJ3 638 aaPredicted RBP7.56□□□□□ -1.2
TVP23B-210ENST00000582288 APBB1O00213 710 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 VWA5AO00534 786 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 RIOK3O14730 519 aaKnown RBP7.56□□□□□ -1.2
TVP23B-210ENST00000582288 C6orf222P0C671 652 aaPredicted RBP7.56□□□□□ -1.2
TVP23B-210ENST00000582288 CYP2C18P33260 490 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 SKIV2LQ15477 1246 aaKnown RBP7.56□□□□□ -1.2
TVP23B-210ENST00000582288 TNNI3KQ59H18 835 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 GNASQ5JWF2 1037 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 KIAA1755Q5JYT7 1200 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 SIAH1Q8IUQ4 282 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 PHOSPHO2Q8TCD6 241 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 PTCD2Q8WV60 388 aaKnown RBP7.56□□□□□ -1.2
TVP23B-210ENST00000582288 CCDC17Q96LX7 622 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 HIPK3Q9H422 1215 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 PIH1D3Q9NQM4 214 aaKnown RBP7.56□□□□□ -1.2
TVP23B-210ENST00000582288 SNRKQ9NRH2 765 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 NOB1Q9ULX3 412 aaKnown RBP7.56□□□□□ -1.2
TVP23B-210ENST00000582288 FPGT-TNNI3KV9GXZ4 949 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 PARP14Q460N5 1801 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 NCOR1O75376 2440 aa7.56□□□□□ -1.2
TVP23B-210ENST00000582288 ZNFX1Q9P2E3 1918 aaKnown RBP7.55□□□□□ -1.2
TVP23B-210ENST00000582288 MYADML2A6NDP7 307 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 ATP2A1O14983 1001 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 POLR3DP05423 398 aaPredicted RBP7.55□□□□□ -1.2
TVP23B-210ENST00000582288 ALADP13716 330 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 ATP2A2P16615 1042 aaKnown RBP7.55□□□□□ -1.2
TVP23B-210ENST00000582288 ZAP70P43403 619 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 MRE11P49959 708 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 ACVR2BQ13705 512 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 CCDC144BQ3MJ40 725 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 TMEM67Q5HYA8 995 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 OTOP2Q7RTS6 562 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 MICALL1Q8N3F8 863 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 MIGA1Q8NAN2 632 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 FBXO22Q8NEZ5 403 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 REPS2Q8NFH8 660 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 VTI1AQ96AJ9 217 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 LENG1Q96BZ8 264 aaPredicted RBP7.55□□□□□ -1.2
TVP23B-210ENST00000582288 CDCA7LQ96GN5 454 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 DBNDD2Q9BQY9 259 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 RIOK1Q9BRS2 568 aaKnown RBP7.55□□□□□ -1.2
TVP23B-210ENST00000582288 TEX13BQ9BXU2 312 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 PPP1R9AQ9ULJ8 1098 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 SMCHD1A6NHR9 2005 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 GBF1Q92538 1859 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 WDFY4Q6ZS81 3184 aa7.55□□□□□ -1.2
TVP23B-210ENST00000582288 TCF20Q9UGU0 1960 aaKnown RBP7.54□□□□□ -1.2
TVP23B-210ENST00000582288 MPHOSPH10O00566 681 aaKnown RBP7.54□□□□□ -1.2
TVP23B-210ENST00000582288 CTAGE5O15320 804 aa7.54□□□□□ -1.2
TVP23B-210ENST00000582288 IDH1O75874 414 aaKnown RBP7.54□□□□□ -1.2
TVP23B-210ENST00000582288 GNAI2P04899 355 aa7.54□□□□□ -1.2
TVP23B-210ENST00000582288 RFC2P35250 354 aa7.54□□□□□ -1.2
TVP23B-210ENST00000582288 RABGGTBP53611 331 aa7.54□□□□□ -1.2
TVP23B-210ENST00000582288 ICA1Q05084 483 aa7.54□□□□□ -1.2
TVP23B-210ENST00000582288 SLFN5Q08AF3 891 aa7.54□□□□□ -1.2
TVP23B-210ENST00000582288 ITGA7Q13683 1181 aa7.54□□□□□ -1.2
TVP23B-210ENST00000582288 ZNF775Q96BV0 537 aaPredicted RBP7.54□□□□□ -1.2
TVP23B-210ENST00000582288 DDX11Q96FC9 970 aa7.54□□□□□ -1.2
TVP23B-210ENST00000582288 SLC9A7Q96T83 725 aa7.54□□□□□ -1.2
TVP23B-210ENST00000582288 NOC4LQ9BVI4 516 aaKnown RBP7.54□□□□□ -1.2
TVP23B-210ENST00000582288 CRNKL1Q9BZJ0 848 aaKnown RBP7.54□□□□□ -1.2
TVP23B-210ENST00000582288 WNT8AQ9H1J5 351 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms