RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 METAP2P50579 478 aaKnown RBP eCLIP23.3■■□□□ 1.32
TOP3A-213ENST00000582230 AK2P54819 239 aa23.3■■□□□ 1.32
TOP3A-213ENST00000582230 SNRNP48Q6IEG0 339 aaKnown RBP23.3■■□□□ 1.32
TOP3A-213ENST00000582230 SPZ1Q9BXG8 430 aa23.3■■□□□ 1.32
TOP3A-213ENST00000582230 PORCNQ9H237 461 aa23.3■■□□□ 1.32
TOP3A-213ENST00000582230 JMJD4Q9H9V9 463 aa23.3■■□□□ 1.32
TOP3A-213ENST00000582230 VAT1LQ9HCJ6 419 aa23.3■■□□□ 1.32
TOP3A-213ENST00000582230 NID2Q14112 1375 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 PARP14Q460N5 1801 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 TNPO2O14787 897 aaKnown RBP23.29■■□□□ 1.32
TOP3A-213ENST00000582230 ERCC3P19447 782 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 HOXD10P28358 340 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 SNAP25P60880 206 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 CCDC174Q6PII3 467 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 COA7Q96BR5 231 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 MTMR8Q96EF0 704 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 TRIM47Q96LD4 638 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 ARHGAP39Q9C0H5 1083 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 EFCC1Q9HA90 598 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 CWC22Q9HCG8 908 aaKnown RBP23.29■■□□□ 1.32
TOP3A-213ENST00000582230 HPS5Q9UPZ3 1129 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 ZNF536O15090 1300 aa23.29■■□□□ 1.32
TOP3A-213ENST00000582230 CDC37Q16543 378 aaPredicted RBP23.28■■□□□ 1.32
TOP3A-213ENST00000582230 TKFCQ3LXA3 575 aa23.28■■□□□ 1.32
TOP3A-213ENST00000582230 TMTC3Q6ZXV5 915 aa23.28■■□□□ 1.32
TOP3A-213ENST00000582230 NBPF11Q86T75 865 aa23.28■■□□□ 1.32
TOP3A-213ENST00000582230 NCAPG2Q86XI2 1143 aa23.28■■□□□ 1.32
TOP3A-213ENST00000582230 CYTH3O43739 400 aa23.27■■□□□ 1.32
TOP3A-213ENST00000582230 STRNO43815 780 aa23.27■■□□□ 1.32
TOP3A-213ENST00000582230 PLEKHA8P1O95397 391 aa23.27■■□□□ 1.32
TOP3A-213ENST00000582230 CTGFP29279 349 aa23.27■■□□□ 1.32
TOP3A-213ENST00000582230 WDR78Q5VTH9 848 aa23.27■■□□□ 1.32
TOP3A-213ENST00000582230 GPR142Q7Z601 462 aa23.27■■□□□ 1.32
TOP3A-213ENST00000582230 PLEKHH3Q7Z736 793 aa23.27■■□□□ 1.32
TOP3A-213ENST00000582230 SRBD1Q8N5C6 995 aaKnown RBP23.27■■□□□ 1.32
TOP3A-213ENST00000582230 AGBL1Q96MI9 1066 aa23.27■■□□□ 1.32
TOP3A-213ENST00000582230 FAM217BQ9NTX9 383 aaPredicted RBP23.27■■□□□ 1.32
TOP3A-213ENST00000582230 FBXO40Q9UH90 709 aa23.27■■□□□ 1.32
TOP3A-213ENST00000582230 CCPG1Q9ULG6 757 aa23.27■■□□□ 1.32
TOP3A-213ENST00000582230 IVNS1ABPQ9Y6Y0 642 aa23.27■■□□□ 1.32
TOP3A-213ENST00000582230 ZBTB5O15062 677 aa23.26■■□□□ 1.31
TOP3A-213ENST00000582230 CDC27P30260 824 aa23.26■■□□□ 1.31
TOP3A-213ENST00000582230 PRMT2P55345 433 aa23.26■■□□□ 1.31
TOP3A-213ENST00000582230 TRAF1Q13077 416 aa23.26■■□□□ 1.31
TOP3A-213ENST00000582230 SLC35G1Q2M3R5 365 aa23.26■■□□□ 1.31
TOP3A-213ENST00000582230 QRICH1Q2TAL8 776 aa23.26■■□□□ 1.31
TOP3A-213ENST00000582230 CTU1Q7Z7A3 348 aaKnown RBP23.26■■□□□ 1.31
TOP3A-213ENST00000582230 CHST13Q8NET6 341 aa23.26■■□□□ 1.31
TOP3A-213ENST00000582230 RRP36Q96EU6 259 aaKnown RBP23.26■■□□□ 1.31
TOP3A-213ENST00000582230 LARP6Q9BRS8 491 aaKnown RBP23.26■■□□□ 1.31
TOP3A-213ENST00000582230 TPCN1Q9ULQ1 816 aa23.26■■□□□ 1.31
TOP3A-213ENST00000582230 PNMA6FA0A0J9YX94 578 aa23.25■■□□□ 1.31
TOP3A-213ENST00000582230 ST18O60284 1047 aa23.25■■□□□ 1.31
TOP3A-213ENST00000582230 ECM2O94769 699 aaPredicted RBP23.25■■□□□ 1.31
TOP3A-213ENST00000582230 SLC4A3P48751 1232 aa23.25■■□□□ 1.31
TOP3A-213ENST00000582230 CAP1Q01518 475 aa23.25■■□□□ 1.31
TOP3A-213ENST00000582230 OTOP1Q7RTM1 612 aa23.25■■□□□ 1.31
TOP3A-213ENST00000582230 ABRAQ8N0Z2 381 aa23.25■■□□□ 1.31
TOP3A-213ENST00000582230 RIPK3Q9Y572 518 aa23.25■■□□□ 1.31
TOP3A-213ENST00000582230 TRIM17Q9Y577 477 aa23.25■■□□□ 1.31
TOP3A-213ENST00000582230 SLC15A5A6NIM6 579 aa23.24■■□□□ 1.31
TOP3A-213ENST00000582230 FCER1AP12319 257 aa23.24■■□□□ 1.31
TOP3A-213ENST00000582230 ALAS1P13196 640 aa23.24■■□□□ 1.31
TOP3A-213ENST00000582230 PTPREP23469 700 aa23.24■■□□□ 1.31
TOP3A-213ENST00000582230 ADD1P35611 737 aaKnown RBP23.24■■□□□ 1.31
TOP3A-213ENST00000582230 FBXO11Q86XK2 927 aa23.24■■□□□ 1.31
TOP3A-213ENST00000582230 CMTR1Q8N1G2 835 aaKnown RBP23.24■■□□□ 1.31
TOP3A-213ENST00000582230 SOCS4Q8WXH5 440 aa23.24■■□□□ 1.31
TOP3A-213ENST00000582230 PIGSQ96S52 555 aa23.24■■□□□ 1.31
TOP3A-213ENST00000582230 AMNQ9BXJ7 453 aa23.24■■□□□ 1.31
TOP3A-213ENST00000582230 SLKQ9H2G2 1235 aaPredicted RBP23.24■■□□□ 1.31
TOP3A-213ENST00000582230 SEC63Q9UGP8 760 aaKnown RBP23.24■■□□□ 1.31
TOP3A-213ENST00000582230 SRRDQ9UH36 339 aa23.24■■□□□ 1.31
TOP3A-213ENST00000582230 LIMCH1Q9UPQ0 1083 aa23.24■■□□□ 1.31
TOP3A-213ENST00000582230 CCT2P78371 535 aaKnown RBP23.23■■□□□ 1.31
TOP3A-213ENST00000582230 FUT2Q10981 343 aa23.23■■□□□ 1.31
TOP3A-213ENST00000582230 PKN2Q16513 984 aaKnown RBP23.23■■□□□ 1.31
TOP3A-213ENST00000582230 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.23■■□□□ 1.31
TOP3A-213ENST00000582230 HOMER1Q86YM7 354 aa23.23■■□□□ 1.31
TOP3A-213ENST00000582230 CCDC82Q8N4S0 544 aa23.23■■□□□ 1.31
TOP3A-213ENST00000582230 TRERF1Q96PN7 1200 aa23.23■■□□□ 1.31
TOP3A-213ENST00000582230 NUDT12Q9BQG2 462 aa23.23■■□□□ 1.31
TOP3A-213ENST00000582230 ACAD9Q9H845 621 aa23.23■■□□□ 1.31
TOP3A-213ENST00000582230 RNF146Q9NTX7 359 aa23.23■■□□□ 1.31
TOP3A-213ENST00000582230 PFKFB2O60825 505 aa23.22■■□□□ 1.31
TOP3A-213ENST00000582230 STK3Q13188 491 aa23.22■■□□□ 1.31
TOP3A-213ENST00000582230 KCTD2Q14681 263 aa23.22■■□□□ 1.31
TOP3A-213ENST00000582230 MORN1Q5T089 497 aa23.22■■□□□ 1.31
TOP3A-213ENST00000582230 CPLX2Q6PUV4 134 aaKnown RBP23.22■■□□□ 1.31
TOP3A-213ENST00000582230 HOMER2Q9NSB8 354 aa23.22■■□□□ 1.31
TOP3A-213ENST00000582230 GJD2Q9UKL4 321 aa23.22■■□□□ 1.31
TOP3A-213ENST00000582230 CPLX1O14810 134 aa23.21■■□□□ 1.31
TOP3A-213ENST00000582230 GRB14Q14449 540 aa23.21■■□□□ 1.31
TOP3A-213ENST00000582230 NOL8Q76FK4 1167 aaKnown RBP23.21■■□□□ 1.31
TOP3A-213ENST00000582230 MMP19Q99542 508 aa23.21■■□□□ 1.31
TOP3A-213ENST00000582230 MAF1Q9H063 256 aa23.21■■□□□ 1.31
TOP3A-213ENST00000582230 NCOA5Q9HCD5 579 aaKnown RBP23.21■■□□□ 1.31
TOP3A-213ENST00000582230 RBM27Q9P2N5 1060 aaKnown RBP23.21■■□□□ 1.31
TOP3A-213ENST00000582230 MRPL11Q9Y3B7 192 aaKnown RBP23.21■■□□□ 1.31
TOP3A-213ENST00000582230 ABCB11O95342 1321 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms