RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	MRVI1	Q9Y6F6	885 aa		11.29	□□□□□ -0.6
TRIM16-222	ENST00000581224	UBE2Q2L	H0YL09	131 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	FZD9	O00144	591 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	KIF3C	O14782	793 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	SLC26A4	O43511	780 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	FOS	P01100	380 aa	Predicted RBP	11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	MYL1	P05976	194 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	BMP3	P12645	472 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	GCFC2	P16383	781 aa	Known RBP	11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	ATP2B1	P20020	1258 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	HOXA7	P31268	230 aa	Predicted RBP	11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	CACNB3	P54284	484 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	NLRP12	P59046	1061 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	SEPT2	Q15019	361 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	BTNL9	Q6UXG8	535 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	NEK8	Q86SG6	692 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	HOMER1	Q86YM7	354 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	ADGRF4	Q8IZF3	695 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	PIBF1	Q8WXW3	757 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	PANK2	Q9BZ23	570 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	CUEDC2	Q9H467	287 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	JMJD4	Q9H9V9	463 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	MAGEF1	Q9HAY2	307 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	VEZT	Q9HBM0	779 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	GPCPD1	Q9NPB8	672 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	RIC8A	Q9NPQ8	531 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	PCDHA6	Q9UN73	950 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	PCDHA8	Q9Y5H6	950 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	WDR90	Q96KV7	1748 aa		11.28	□□□□□ -0.6
TRIM16-222	ENST00000581224	WNT10B	O00744	389 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	GH2	P01242	217 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	SLFN14	P0C7P3	912 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	VEGFA	P15692	232 aa	Predicted RBP	11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	ZNF174	Q15697	407 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	DCAF15	Q66K64	600 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	FAM160B2	Q86V87	743 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	AMN	Q9BXJ7	453 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	UBA5	Q9GZZ9	404 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	DNAJC18	Q9H819	358 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	TUBE1	Q9UJT0	475 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	TMX2	Q9Y320	296 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	PPP2R3B	Q9Y5P8	575 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	STK24	Q9Y6E0	443 aa		11.27	□□□□□ -0.61
TRIM16-222	ENST00000581224	CLRN2	A0PK11	232 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	IKBKB	O14920	756 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	POLR2D	O15514	142 aa	Known RBP	11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	PTMA	P06454	111 aa	Known RBP	11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	FDX1	P10109	184 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	LMOD1	P29536	600 aa	Predicted RBP	11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	MCM7	P33993	719 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	CAP2	P40123	477 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	UBA7	P41226	1012 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	USP11	P51784	963 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	IK	Q13123	557 aa	Predicted RBP	11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	AP3B2	Q13367	1082 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	TMEM266	Q2M3C6	531 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	GPC2	Q8N158	579 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	MLKL	Q8NB16	471 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	SMARCE1	Q969G3	411 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	CCDC47	Q96A33	483 aa	Known RBP	11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	CLIC6	Q96NY7	704 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	CSRNP2	Q9H175	543 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	PSTPIP2	Q9H939	334 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	CBX8	Q9HC52	389 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	RMND1	Q9NWS8	449 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	CNTNAP1	P78357	1384 aa		11.26	□□□□□ -0.61
TRIM16-222	ENST00000581224	SCN4A	P35499	1836 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	VWA3A	A6NCI4	1184 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	IQCA1L	A6NCM1	817 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	NEMF	O60524	1076 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	CTNND1	O60716	968 aa	Known RBP	11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	STAT2	P52630	851 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	C1QTNF8	P60827	252 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	PDIA5	Q14554	519 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	POSTN	Q15063	836 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	NT5DC1	Q5TFE4	455 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	SYDE2	Q5VT97	1194 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	PPP4R3A	Q6IN85	833 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	SARM1	Q6SZW1	724 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	MOXD1	Q6UVY6	613 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	FBXO11	Q86XK2	927 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	FAM43A	Q8N2R8	423 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	SAMD3	Q8N6K7	520 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	LPAR1	Q92633	364 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	SHISA4	Q96DD7	197 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	GSDMA	Q96QA5	445 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	CCSER1	Q9C0I3	900 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	LRRC27	Q9C0I9	530 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	DNAJC25	Q9H1X3	360 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	EHMT1	Q9H9B1	1298 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	CNOT7	Q9UIV1	285 aa	Known RBP	11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	ZBTB21	Q9ULJ3	1066 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	PCDHA1	Q9Y5I3	950 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	PCDHAC2	Q9Y5I4	1007 aa		11.25	□□□□□ -0.61
TRIM16-222	ENST00000581224	RAD21	O60216	631 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms