RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 DNM1LO00429 736 aa12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 PDHBP11177 359 aa12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 FXR1P51114 621 aaKnown RBP eCLIP12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 ANO1Q5XXA6 986 aa12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 C7orf61Q8IZ16 206 aa12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 MSL3Q8N5Y2 521 aaKnown RBP12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 FAM133AQ8N9E0 248 aa12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 TTC14Q96N46 770 aa12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 RANBP17Q9H2T7 1088 aaKnown RBP12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 RNF41Q9H4P4 317 aaPredicted RBP12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 TOMM22Q9NS69 142 aa12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 RBM27Q9P2N5 1060 aaKnown RBP12.49□□□□□ -0.41
SUPT4H1-204ENST00000580947 RAD50Q92878 1312 aa12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 ZNF213O14771 459 aa12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 CHMLP26374 656 aa12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 NT5C2P49902 561 aa12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 SNAP25P60880 206 aa12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 ZNF543Q08ER8 600 aa12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 ANKS1AQ92625 1134 aa12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 ESR2Q92731 530 aa12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 KATNBL1Q9H079 304 aa12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 A1CFQ9NQ94 594 aaKnown RBP12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 RNF146Q9NTX7 359 aa12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 FBXO40Q9UH90 709 aa12.48□□□□□ -0.41
SUPT4H1-204ENST00000580947 COL6A3P12111 3177 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 B4E1Z4 1266 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 KDM4AO75164 1064 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 ICAM1P05362 532 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 SLC16A2P36021 539 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 CNTN2Q02246 1040 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 SNX17Q15036 470 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 LRRC41Q15345 812 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 TKFCQ3LXA3 575 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 MUM1L1Q5H9M0 696 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 GJC2Q5T442 439 aaPredicted RBP12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 DGKHQ86XP1 1220 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 DDX11Q96FC9 970 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 GDF15Q99988 308 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 ZKSCAN3Q9BRR0 538 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 ACAD9Q9H845 621 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 HOMER2Q9NSB8 354 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 MTMR7Q9Y216 660 aa12.47□□□□□ -0.41
SUPT4H1-204ENST00000580947 FRMPD2Q68DX3 1309 aaPredicted RBP12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 SOWAHBA6NEL2 793 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 ADCY6O43306 1168 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 ADAMTS4O75173 837 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 SLC4A3P48751 1232 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 PTH1RQ03431 593 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 CCDC96Q2M329 555 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 SYDE2Q5VT97 1194 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 CCDC174Q6PII3 467 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 ANKRD35Q8N283 1001 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 ENAHQ8N8S7 591 aaPredicted RBP12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 ARRDC4Q8NCT1 418 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 LENG1Q96BZ8 264 aaPredicted RBP12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 TRERF1Q96PN7 1200 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 GPCPD1Q9NPB8 672 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 ZSWIM5Q9P217 1185 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 ZMYND8Q9ULU4 1186 aaPredicted RBP12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 TAF6LQ9Y6J9 622 aa12.46□□□□□ -0.41
SUPT4H1-204ENST00000580947 SGSM2O43147 1006 aa12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 ALAS1P13196 640 aa12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 AKR1A1P14550 325 aa12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 IKQ13123 557 aaPredicted RBP12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 IMMTQ16891 758 aaKnown RBP12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 ARMCX2Q7L311 632 aa12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 CCDC144CPQ8IYA2 1237 aa12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 ZSCAN10Q96SZ4 725 aaPredicted RBP12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 SENP6Q9GZR1 1112 aaPredicted RBP12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 XPNPEP3Q9NQH7 507 aa12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 CYP39A1Q9NYL5 469 aa12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 CTNNA3Q9UI47 895 aa12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 ISY1Q9ULR0 285 aaKnown RBP12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 PHF24Q9UPV7 400 aa12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 CTDP1Q9Y5B0 961 aaPredicted RBP12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 MYH7BA7E2Y1 1941 aa12.45□□□□□ -0.42
SUPT4H1-204ENST00000580947 SYNRGQ9UMZ2 1314 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 A0A1W2PPC1 479 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 PGK1P00558 417 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 CYP21A2P08686 494 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 RARBP10826 455 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 SYN1P17600 705 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 BMP8BP34820 402 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 MAGEA10P43363 369 aaPredicted RBP12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 ACVR2BQ13705 512 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 SEC23AQ15436 765 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 C1orf53Q5VUE5 145 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 CCSAPQ6IQ19 270 aaPredicted RBP12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 CYB5R4Q7L1T6 521 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 PNMA1Q8ND90 353 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 KLHDC9Q8NEP7 349 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 CLEC4DQ8WXI8 215 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 CPVLQ9H3G5 476 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 ABHD16BQ9H3Z7 469 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 CCPG1Q9ULG6 757 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 CNPY2Q9Y2B0 182 aa12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 DDX49Q9Y6V7 483 aaKnown RBP12.44□□□□□ -0.42
SUPT4H1-204ENST00000580947 TNKSO95271 1327 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms