RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 KAT14Q9H8E8 782 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 FLRT1Q9NZU1 646 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 OGDHLQ9ULD0 1010 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 PLXNB2O15031 1838 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 COBLO75128 1261 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 SEC24BO95487 1268 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 FDX1P10109 184 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 BMP3P12645 472 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 WTAPQ15007 396 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 SLFN13Q68D06 897 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 BLOC1S2Q6QNY1 142 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 NECAB2Q7Z6G3 386 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 SGMS1Q86VZ5 419 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 RIOX2Q8IUF8 465 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 ABRAQ8N0Z2 381 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 PRPF38AQ8NAV1 312 aaKnown RBP11.56□□□□□ -0.56
GGA3-209ENST00000580646 PNMA1Q8ND90 353 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 IL27Q8NEV9 243 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 REPS2Q8NFH8 660 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 MAP3K14Q99558 947 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 SLC5A4Q9NY91 659 aa11.56□□□□□ -0.56
GGA3-209ENST00000580646 ZNF214Q9UL59 606 aaPredicted RBP11.56□□□□□ -0.56
GGA3-209ENST00000580646 COLQQ9Y215 455 aaPredicted RBP11.56□□□□□ -0.56
GGA3-209ENST00000580646 H0YGN5 161 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 SH2B2O14492 632 aaPredicted RBP11.55□□□□□ -0.56
GGA3-209ENST00000580646 IGHA2P01877 340 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 PDHBP11177 359 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 FCER1AP12319 257 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 CYP2C19P33261 490 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 SLC1A4P43007 532 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 TMEM67Q5HYA8 995 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 GPATCH4Q5T3I0 446 aaKnown RBP11.55□□□□□ -0.56
GGA3-209ENST00000580646 OLFML2BQ68BL8 750 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 LHX8Q68G74 356 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 BTNL9Q6UXG8 535 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 FAM160B2Q86V87 743 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 DIS3LQ8TF46 1054 aaKnown RBP11.55□□□□□ -0.56
GGA3-209ENST00000580646 JAKMIP1Q96N16 626 aaKnown RBP11.55□□□□□ -0.56
GGA3-209ENST00000580646 AGXT2Q9BYV1 514 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 LY9Q9HBG7 655 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 FEM1BQ9UK73 627 aa11.55□□□□□ -0.56
GGA3-209ENST00000580646 ZNFX1Q9P2E3 1918 aaKnown RBP11.54□□□□□ -0.56
GGA3-209ENST00000580646 A0A0C4DFX4 3053 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 ZNF236Q9UL36 1845 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 ZBED4O75132 1171 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 DDAH1O94760 285 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
GGA3-209ENST00000580646 RPS6KB1P23443 525 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 COPB2P35606 906 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 RBM25P49756 843 aaKnown RBP11.54□□□□□ -0.56
GGA3-209ENST00000580646 MNX1P50219 401 aaPredicted RBP11.54□□□□□ -0.56
GGA3-209ENST00000580646 STAT2P52630 851 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 RCAN1P53805 252 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 ASPRV1Q53RT3 343 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 RUFY3Q7L099 469 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 CHST3Q7LGC8 479 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 CHURC1Q8WUH1 139 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 KIFC2Q96AC6 838 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 MMP19Q99542 508 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 TEX13BQ9BXU2 312 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 BACH2Q9BYV9 841 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 ALDH8A1Q9H2A2 487 aaPredicted RBP11.54□□□□□ -0.56
GGA3-209ENST00000580646 UPF2Q9HAU5 1272 aaKnown RBP11.54□□□□□ -0.56
GGA3-209ENST00000580646 CTDP1Q9Y5B0 961 aaPredicted RBP11.54□□□□□ -0.56
GGA3-209ENST00000580646 NR2E3Q9Y5X4 410 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 TRIOBPQ9H2D6 2365 aa11.54□□□□□ -0.56
GGA3-209ENST00000580646 COL6A3P12111 3177 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 ATP2A1O14983 1001 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 CALM1P0DP23 149 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 CALM2P0DP24 149 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 CALM3P0DP25 149 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 CNGA1P29973 690 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 ZNF543Q08ER8 600 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 TROAPQ12815 778 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 KCTD2Q14681 263 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 SNRNP48Q6IEG0 339 aaKnown RBP11.53□□□□□ -0.56
GGA3-209ENST00000580646 CATIPQ7Z7H3 387 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 CPXCR1Q8N123 301 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 TRPV1Q8NER1 839 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 MAML3Q96JK9 1138 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 SLC38A10Q9HBR0 1119 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 DDX20Q9UHI6 824 aaKnown RBP11.53□□□□□ -0.56
GGA3-209ENST00000580646 RIPK3Q9Y572 518 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 CYP46A1Q9Y6A2 500 aa11.53□□□□□ -0.56
GGA3-209ENST00000580646 CCDC69A6NI79 296 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 EVI5O60447 810 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 MSCO60682 206 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 PGK2P07205 417 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 PARP1P09874 1014 aaKnown RBP11.52□□□□□ -0.57
GGA3-209ENST00000580646 CYBAP13498 195 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 SLC4A3P48751 1232 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 OAZ1P54368 228 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 EVCP57679 992 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 COL9A3Q14050 684 aaPredicted RBP11.52□□□□□ -0.57
GGA3-209ENST00000580646 GRM4Q14833 912 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 ZNF792Q3KQV3 632 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 ZNF654Q8IZM8 581 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 CHMP4CQ96CF2 233 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms