RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.28■■□□□ 1
MKS1-209ENST00000580127 ZBTB47Q9UFB7 747 aaPredicted RBP21.28■■□□□ 1
MKS1-209ENST00000580127 TTC41PQ6P2S7 1318 aa21.28■■□□□ 1
MKS1-209ENST00000580127 IGKV6D-41A0A0C4DH26 115 aa21.27■■□□□ 1
MKS1-209ENST00000580127 CST5P28325 142 aaPredicted RBP21.27■■□□□ 1
MKS1-209ENST00000580127 CCDC144BQ3MJ40 725 aa21.27■■□□□ 1
MKS1-209ENST00000580127 NOL8Q76FK4 1167 aaKnown RBP21.27■■□□□ 1
MKS1-209ENST00000580127 FAM160B2Q86V87 743 aa21.27■■□□□ 1
MKS1-209ENST00000580127 NAPBQ9H115 298 aa21.27■■□□□ 1
MKS1-209ENST00000580127 ASB14A6NK59 587 aa21.26■□□□□ 0.99
MKS1-209ENST00000580127 TMEM232C9JQI7 657 aa21.26■□□□□ 0.99
MKS1-209ENST00000580127 FOSL2P15408 326 aa21.26■□□□□ 0.99
MKS1-209ENST00000580127 STAT2P52630 851 aa21.26■□□□□ 0.99
MKS1-209ENST00000580127 TFAP4Q01664 338 aa21.26■□□□□ 0.99
MKS1-209ENST00000580127 PPIGQ13427 754 aaKnown RBP eCLIP21.26■□□□□ 0.994e-6■□□□□ 8.2
MKS1-209ENST00000580127 TKFCQ3LXA3 575 aa21.26■□□□□ 0.99
MKS1-209ENST00000580127 C20orf194Q5TEA3 1177 aa21.26■□□□□ 0.99
MKS1-209ENST00000580127 TMEM199Q8N511 208 aa21.26■□□□□ 0.99
MKS1-209ENST00000580127 COL25A1Q9BXS0 654 aaPredicted RBP21.26■□□□□ 0.99
MKS1-209ENST00000580127 ACAD9Q9H845 621 aa21.26■□□□□ 0.99
MKS1-209ENST00000580127 GREB1LQ9C091 1923 aaPredicted RBP21.25■□□□□ 0.99
MKS1-209ENST00000580127 A0A0U1RQG5 324 aaPredicted RBP21.25■□□□□ 0.99
MKS1-209ENST00000580127 ASGR1P07306 291 aa21.25■□□□□ 0.99
MKS1-209ENST00000580127 ITGB8P26012 769 aa21.25■□□□□ 0.99
MKS1-209ENST00000580127 SLC1A4P43007 532 aa21.25■□□□□ 0.99
MKS1-209ENST00000580127 GJA9P57773 515 aa21.25■□□□□ 0.99
MKS1-209ENST00000580127 MFSD5Q6N075 450 aa21.25■□□□□ 0.99
MKS1-209ENST00000580127 ARMCX2Q7L311 632 aa21.25■□□□□ 0.99
MKS1-209ENST00000580127 STAG1Q8WVM7 1258 aa21.25■□□□□ 0.99
MKS1-209ENST00000580127 LENG1Q96BZ8 264 aaPredicted RBP21.25■□□□□ 0.99
MKS1-209ENST00000580127 SEZ6LQ9BYH1 1024 aa21.25■□□□□ 0.99
MKS1-209ENST00000580127 M0R2C6 588 aa21.24■□□□□ 0.99
MKS1-209ENST00000580127 ARVCFO00192 962 aa21.24■□□□□ 0.99
MKS1-209ENST00000580127 CABYRO75952 493 aa21.24■□□□□ 0.99
MKS1-209ENST00000580127 CCSAPQ6IQ19 270 aaPredicted RBP21.24■□□□□ 0.99
MKS1-209ENST00000580127 CCDC129Q6ZRS4 1044 aa21.24■□□□□ 0.99
MKS1-209ENST00000580127 LRRC47Q8N1G4 583 aaKnown RBP21.24■□□□□ 0.99
MKS1-209ENST00000580127 MYLIPQ8WY64 445 aa21.24■□□□□ 0.99
MKS1-209ENST00000580127 GMCL1Q96IK5 515 aa21.24■□□□□ 0.99
MKS1-209ENST00000580127 FSD1Q9BTV5 496 aa21.24■□□□□ 0.99
MKS1-209ENST00000580127 UPF3AQ9H1J1 476 aaKnown RBP21.24■□□□□ 0.99
MKS1-209ENST00000580127 HOMER2Q9NSB8 354 aa21.24■□□□□ 0.99
MKS1-209ENST00000580127 ZEB2O60315 1214 aa21.23■□□□□ 0.99
MKS1-209ENST00000580127 CDK7P50613 346 aa21.23■□□□□ 0.99
MKS1-209ENST00000580127 TNFAIP2Q03169 654 aa21.23■□□□□ 0.99
MKS1-209ENST00000580127 PPARAQ07869 468 aa21.23■□□□□ 0.99
MKS1-209ENST00000580127 CCDC144CPQ8IYA2 1237 aa21.23■□□□□ 0.99
MKS1-209ENST00000580127 SYMPKQ92797 1274 aaKnown RBP21.23■□□□□ 0.99
MKS1-209ENST00000580127 AP5M1Q9H0R1 490 aa21.23■□□□□ 0.99
MKS1-209ENST00000580127 TTYH1Q9H313 450 aaPredicted RBP21.23■□□□□ 0.99
MKS1-209ENST00000580127 EPB41L4AQ9HCS5 686 aaPredicted RBP21.23■□□□□ 0.99
MKS1-209ENST00000580127 PLA2G6O60733 806 aa21.22■□□□□ 0.99
MKS1-209ENST00000580127 EPHB4P54760 987 aa21.22■□□□□ 0.99
MKS1-209ENST00000580127 TSHZ3Q63HK5 1081 aa21.22■□□□□ 0.99
MKS1-209ENST00000580127 RCSD1Q6JBY9 416 aa21.22■□□□□ 0.99
MKS1-209ENST00000580127 MTIF3Q9H2K0 278 aaKnown RBP21.22■□□□□ 0.99
MKS1-209ENST00000580127 STX8Q9UNK0 236 aa21.22■□□□□ 0.99
MKS1-209ENST00000580127 TSPY2A6NKD2 308 aa21.21■□□□□ 0.99
MKS1-209ENST00000580127 MCCP23508 829 aa21.21■□□□□ 0.99
MKS1-209ENST00000580127 TRERF1Q96PN7 1200 aa21.21■□□□□ 0.99
MKS1-209ENST00000580127 RNF146Q9NTX7 359 aa21.21■□□□□ 0.99
MKS1-209ENST00000580127 TBX21Q9UL17 535 aa21.21■□□□□ 0.99
MKS1-209ENST00000580127 LAMA2P24043 3122 aaKnown RBP21.21■□□□□ 0.99
MKS1-209ENST00000580127 DNAJB2P25686 324 aa21.2■□□□□ 0.98
MKS1-209ENST00000580127 CNTN2Q02246 1040 aa21.2■□□□□ 0.98
MKS1-209ENST00000580127 ZMYM1Q5SVZ6 1142 aa21.2■□□□□ 0.98
MKS1-209ENST00000580127 FAM133AQ8N9E0 248 aa21.2■□□□□ 0.98
MKS1-209ENST00000580127 PLIN4Q96Q06 1357 aa21.2■□□□□ 0.98
MKS1-209ENST00000580127 MCM3APO60318 1980 aa21.19■□□□□ 0.98
MKS1-209ENST00000580127 MYADML2A6NDP7 307 aa21.19■□□□□ 0.98
MKS1-209ENST00000580127 ALAS1P13196 640 aa21.19■□□□□ 0.98
MKS1-209ENST00000580127 NKX3-2P78367 333 aa21.19■□□□□ 0.98
MKS1-209ENST00000580127 IQSEC1Q6DN90 963 aa21.19■□□□□ 0.98
MKS1-209ENST00000580127 PSRC1Q6PGN9 363 aaPredicted RBP21.19■□□□□ 0.98
MKS1-209ENST00000580127 TIFAQ96CG3 184 aa21.19■□□□□ 0.98
MKS1-209ENST00000580127 AGBL1Q96MI9 1066 aa21.19■□□□□ 0.98
MKS1-209ENST00000580127 ZNF576Q9H609 170 aa21.19■□□□□ 0.98
MKS1-209ENST00000580127 SEC62Q99442 399 aaKnown RBP21.18■□□□□ 0.98
MKS1-209ENST00000580127 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.18■□□□□ 0.98
MKS1-209ENST00000580127 A1CFQ9NQ94 594 aaKnown RBP21.18■□□□□ 0.98
MKS1-209ENST00000580127 Q9Y3F1 56 aa21.18■□□□□ 0.98
MKS1-209ENST00000580127 RANBP6O60518 1105 aaKnown RBP21.17■□□□□ 0.98
MKS1-209ENST00000580127 MX1P20591 662 aa21.17■□□□□ 0.98
MKS1-209ENST00000580127 FSCN1Q16658 493 aaKnown RBP21.17■□□□□ 0.98
MKS1-209ENST00000580127 FGD4Q96M96 766 aa21.17■□□□□ 0.98
MKS1-209ENST00000580127 GAS2L1Q99501 681 aaPredicted RBP21.17■□□□□ 0.98
MKS1-209ENST00000580127 ADD3Q9UEY8 706 aaKnown RBP21.17■□□□□ 0.98
MKS1-209ENST00000580127 MSRAQ9UJ68 235 aa21.17■□□□□ 0.98
MKS1-209ENST00000580127 PNMA2Q9UL42 364 aa21.17■□□□□ 0.98
MKS1-209ENST00000580127 DYNC1LI2O43237 492 aaPredicted RBP21.16■□□□□ 0.98
MKS1-209ENST00000580127 CSF2RAP15509 400 aa21.16■□□□□ 0.98
MKS1-209ENST00000580127 GRIN2CQ14957 1233 aa21.16■□□□□ 0.98
MKS1-209ENST00000580127 TMEM240Q5SV17 173 aa21.16■□□□□ 0.98
MKS1-209ENST00000580127 KCTD1Q719H9 257 aa21.16■□□□□ 0.98
MKS1-209ENST00000580127 FAM126BQ8IXS8 530 aa21.16■□□□□ 0.98
MKS1-209ENST00000580127 PPP1R12CQ9BZL4 782 aa21.16■□□□□ 0.98
MKS1-209ENST00000580127 MYO9BQ13459 2157 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 FGBP02675 491 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 BEX3Q00994 111 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 ITGA7Q13683 1181 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms