RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 SLFNL1Q499Z3 407 aa13.55□□□□□ -0.24
SUPT4H1-203ENST00000579289 GNASQ5JWF2 1037 aa13.55□□□□□ -0.24
SUPT4H1-203ENST00000579289 MICALL1Q8N3F8 863 aa13.55□□□□□ -0.24
SUPT4H1-203ENST00000579289 TSPYL2Q9H2G4 693 aaPredicted RBP13.55□□□□□ -0.24
SUPT4H1-203ENST00000579289 ABHD16BQ9H3Z7 469 aa13.55□□□□□ -0.24
SUPT4H1-203ENST00000579289 ZHX1Q9UKY1 873 aaPredicted RBP13.55□□□□□ -0.24
SUPT4H1-203ENST00000579289 SCN5AQ14524 2016 aa13.55□□□□□ -0.24
SUPT4H1-203ENST00000579289 CYP2D7A0A087X1C5 515 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 MAGEB6P1A0A0J9YX57 407 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 RBAK-RBAKDNI3L0D1 243 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 PRKAB2O43741 272 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 CHGBP05060 677 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 CA3P07451 260 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 PDE6AP16499 860 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 CDK8P49336 464 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 FAM83BQ5T0W9 1011 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 C12orf60Q5U649 245 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 CXCL17Q6UXB2 119 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 IL27Q8NEV9 243 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 SCLYQ96I15 445 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 CERS4Q9HA82 394 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 SWAP70Q9UH65 585 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 SLC4A7Q9Y6M7 1214 aa13.54□□□□□ -0.24
SUPT4H1-203ENST00000579289 COL4A4P53420 1690 aaPredicted RBP13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 MYH8P13535 1937 aa13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 BAZ2AQ9UIF9 1905 aaKnown RBP13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 BCAR3O75815 825 aa13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 ITGA7Q13683 1181 aa13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 C16orf86Q6ZW13 317 aa13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 ARMCX2Q7L311 632 aa13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 CCDC144CPQ8IYA2 1237 aa13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 SNX27Q96L92 541 aa13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 NUP88Q99567 741 aaPredicted RBP13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 TEX13BQ9BXU2 312 aa13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 ARHGEF10LQ9HCE6 1279 aa13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
SUPT4H1-203ENST00000579289 PRR33A8MZF0 331 aa13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 TLR3O15455 904 aaKnown RBP13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 SURF6O75683 361 aaKnown RBP13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 ATP2A2P16615 1042 aaKnown RBP13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 COPB2P35606 906 aa13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 MRE11P49959 708 aa13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 GRB10Q13322 594 aa13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 GPNMBQ14956 572 aa13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 SNRNP48Q6IEG0 339 aaKnown RBP13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 FAM133AQ8N9E0 248 aa13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 HLA-CQ95604 372 aa13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 CCDC17Q96LX7 622 aa13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 ZNF532Q9HCE3 1301 aa13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 TET1Q8NFU7 2136 aa13.52□□□□□ -0.25
SUPT4H1-203ENST00000579289 C5orf42Q9H799 3197 aa13.51□□□□□ -0.25
SUPT4H1-203ENST00000579289 CFAP54Q96N23 3096 aa13.51□□□□□ -0.25
SUPT4H1-203ENST00000579289 LCTP09848 1927 aa13.51□□□□□ -0.25
SUPT4H1-203ENST00000579289 SOWAHBA6NEL2 793 aa13.51□□□□□ -0.25
SUPT4H1-203ENST00000579289 SMPD1P17405 629 aa13.51□□□□□ -0.25
SUPT4H1-203ENST00000579289 CNTN2Q02246 1040 aa13.51□□□□□ -0.25
SUPT4H1-203ENST00000579289 TMEM67Q5HYA8 995 aa13.51□□□□□ -0.25
SUPT4H1-203ENST00000579289 TAPT1Q6NXT6 567 aa13.51□□□□□ -0.25
SUPT4H1-203ENST00000579289 CRNKL1Q9BZJ0 848 aaKnown RBP13.51□□□□□ -0.25
SUPT4H1-203ENST00000579289 SH2D4AQ9H788 454 aa13.51□□□□□ -0.25
SUPT4H1-203ENST00000579289 SLC38A10Q9HBR0 1119 aa13.51□□□□□ -0.25
SUPT4H1-203ENST00000579289 MYO15AQ9UKN7 3530 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 ZNF318Q5VUA4 2279 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 APBB1O00213 710 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 PSMC6P62333 389 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 NHLH1Q02575 133 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 SLC9C2Q5TAH2 1124 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 FAM178BQ8IXR5 827 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 TMEM57Q8N5G2 664 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 ANKS1AQ92625 1134 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 VTI1AQ96AJ9 217 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 SLF1Q9BQI6 1058 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 ALDH8A1Q9H2A2 487 aaPredicted RBP13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 MTIF3Q9H2K0 278 aaKnown RBP13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 ARMT1Q9H993 441 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 KANSL2Q9H9L4 492 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 PDGFCQ9NRA1 345 aa13.5□□□□□ -0.25
SUPT4H1-203ENST00000579289 ZNF536O15090 1300 aa13.49□□□□□ -0.25
SUPT4H1-203ENST00000579289 IGKV6D-41A0A0C4DH26 115 aa13.49□□□□□ -0.25
SUPT4H1-203ENST00000579289 CABYRO75952 493 aa13.49□□□□□ -0.25
SUPT4H1-203ENST00000579289 TNFAIP2Q03169 654 aa13.49□□□□□ -0.25
SUPT4H1-203ENST00000579289 SKIV2LQ15477 1246 aaKnown RBP13.49□□□□□ -0.25
SUPT4H1-203ENST00000579289 FSCN1Q16658 493 aaKnown RBP13.49□□□□□ -0.25
SUPT4H1-203ENST00000579289 RPUSD2Q8IZ73 545 aaKnown RBP13.49□□□□□ -0.25
SUPT4H1-203ENST00000579289 DDX11Q96FC9 970 aa13.49□□□□□ -0.25
SUPT4H1-203ENST00000579289 C1orf115Q9H7X2 142 aa13.49□□□□□ -0.25
SUPT4H1-203ENST00000579289 TRMT13Q9NUP7 481 aaKnown RBP13.49□□□□□ -0.25
SUPT4H1-203ENST00000579289 DMDP11532 3685 aa13.49□□□□□ -0.25
SUPT4H1-203ENST00000579289 POTEB3A0JP26 581 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 LCHNA4D1U4 455 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 USP17L12C9JPN9 530 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 USP17L21D6R901 530 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 F5H6K3 240 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 NDUFB10O96000 172 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 CYP2C9P11712 490 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 HNRNPUQ00839 825 aaKnown RBP eCLIP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms