RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ECHDC1Q9NTX5 307 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 ADCY6O43306 1168 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 TTLL1O95922 423 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 FDX1P10109 184 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 GNAT2P19087 354 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 NKX3-2P78367 333 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 IRX5P78411 483 aaPredicted RBP10.21□□□□□ -0.77
CASC3-206ENST00000579238 TJAP1Q5JTD0 557 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 GNASQ5JWF2 1037 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 RASIP1Q5U651 963 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 ARMCX2Q7L311 632 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 TMEM199Q8N511 208 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 USP38Q8NB14 1042 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 GMCL1P1Q8NEA9 526 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 CEP95Q96GE4 821 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 MTMR4Q9NYA4 1195 aa10.21□□□□□ -0.77
CASC3-206ENST00000579238 CTAGE5O15320 804 aa10.2□□□□□ -0.78
CASC3-206ENST00000579238 TLR3O15455 904 aaKnown RBP10.2□□□□□ -0.78
CASC3-206ENST00000579238 RNF113AO15541 343 aaKnown RBP10.2□□□□□ -0.78
CASC3-206ENST00000579238 GPAA1O43292 621 aa10.2□□□□□ -0.78
CASC3-206ENST00000579238 SMARCA5O60264 1052 aaPredicted RBP10.2□□□□□ -0.78
CASC3-206ENST00000579238 ZFYP08048 801 aaPredicted RBP10.2□□□□□ -0.78
CASC3-206ENST00000579238 CSF2RAP15509 400 aa10.2□□□□□ -0.78
CASC3-206ENST00000579238 TDO2P48775 406 aa10.2□□□□□ -0.78
CASC3-206ENST00000579238 PSRC1Q6PGN9 363 aaPredicted RBP10.2□□□□□ -0.78
CASC3-206ENST00000579238 CCDC129Q6ZRS4 1044 aa10.2□□□□□ -0.78
CASC3-206ENST00000579238 C16orf59Q7L2K0 433 aa10.2□□□□□ -0.78
CASC3-206ENST00000579238 FAM126BQ8IXS8 530 aa10.2□□□□□ -0.78
CASC3-206ENST00000579238 MIER1Q8N108 512 aa10.2□□□□□ -0.78
CASC3-206ENST00000579238 GAS2L1Q99501 681 aaPredicted RBP10.2□□□□□ -0.78
CASC3-206ENST00000579238 PBX4Q9BYU1 374 aa10.2□□□□□ -0.78
CASC3-206ENST00000579238 KATNBL1Q9H079 304 aa10.2□□□□□ -0.78
CASC3-206ENST00000579238 EPB41L4AQ9HCS5 686 aaPredicted RBP10.2□□□□□ -0.78
CASC3-206ENST00000579238 SPTBN5Q9NRC6 3674 aaKnown RBP10.2□□□□□ -0.78
CASC3-206ENST00000579238 PLIN4Q96Q06 1357 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 PATL2C9JE40 543 aaKnown RBP10.19□□□□□ -0.78
CASC3-206ENST00000579238 PRDM1O75626 825 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 CD4P01730 458 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 APPP05067 770 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 BMP3P12645 472 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 PBX2P40425 430 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 AKNAD1Q5T1N1 836 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 SLFN13Q68D06 897 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 ZNF365Q70YC5 407 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 FAM160B2Q86V87 743 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 CCDC144CPQ8IYA2 1237 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 LRRC47Q8N1G4 583 aaKnown RBP10.19□□□□□ -0.78
CASC3-206ENST00000579238 FAM133AQ8N9E0 248 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 NEDD1Q8NHV4 660 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 GPATCH3Q96I76 525 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 PPP1R12CQ9BZL4 782 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 ACAD9Q9H845 621 aa10.19□□□□□ -0.78
CASC3-206ENST00000579238 MCM3APO60318 1980 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 MYH4Q9Y623 1939 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.18□□□□□ -0.78
CASC3-206ENST00000579238 ASB14A6NK59 587 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 GRXCR1A8MXD5 290 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 TMEM232C9JQI7 657 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 M0R2C6 588 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 CABYRO75952 493 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 TSPY3P0CV98 308 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 TSPY8P0CW00 308 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 ACRP10323 421 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 CYP2C18P33260 490 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 STAT2P52630 851 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 CNTN2Q02246 1040 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 TNFAIP2Q03169 654 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 PDE4BQ07343 736 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 RAB30Q15771 203 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
CASC3-206ENST00000579238 TKFCQ3LXA3 575 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 NOL8Q76FK4 1167 aaKnown RBP10.18□□□□□ -0.78
CASC3-206ENST00000579238 IFNL3Q8IZI9 196 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 SLC43A3Q8NBI5 491 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 CHURC1Q8WUH1 139 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 HERVK_113Q902F9 699 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 GMCL1Q96IK5 515 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 NACAP1Q9BZK3 213 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 MTIF3Q9H2K0 278 aaKnown RBP10.18□□□□□ -0.78
CASC3-206ENST00000579238 IL23AQ9NPF7 189 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 A1CFQ9NQ94 594 aaKnown RBP10.18□□□□□ -0.78
CASC3-206ENST00000579238 HOMER2Q9NSB8 354 aa10.18□□□□□ -0.78
CASC3-206ENST00000579238 GNEQ9Y223 722 aaKnown RBP10.18□□□□□ -0.78
CASC3-206ENST00000579238 ASTN1O14525 1302 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 SOWAHBA6NEL2 793 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 TNFRSF10AO00220 468 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 ZEB2O60315 1214 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 PLA2G6O60733 806 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 SLC3A2P08195 630 aaKnown RBP10.17□□□□□ -0.78
CASC3-206ENST00000579238 BEX3Q00994 111 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 TFAP4Q01664 338 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 FSCN1Q16658 493 aaKnown RBP10.17□□□□□ -0.78
CASC3-206ENST00000579238 PPP4R3BQ5MIZ7 849 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 TSHZ3Q63HK5 1081 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 CXCL17Q6UXB2 119 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 TLK2Q86UE8 772 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 STAG1Q8WVM7 1258 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 ATXN2LQ8WWM7 1075 aaKnown RBP10.17□□□□□ -0.78
CASC3-206ENST00000579238 AGBL1Q96MI9 1066 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 SEZ6LQ9BYH1 1024 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms