RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 RNF180Q86T96 592 aa18.75■□□□□ 0.59
CRLF3-203ENST00000578692 UBE2OQ9C0C9 1292 aaKnown RBP18.75■□□□□ 0.59
CRLF3-203ENST00000578692 HOMER2Q9NSB8 354 aa18.75■□□□□ 0.59
CRLF3-203ENST00000578692 PRR12Q9ULL5 1215 aa18.75■□□□□ 0.59
CRLF3-203ENST00000578692 ATP11BQ9Y2G3 1177 aa18.75■□□□□ 0.59
CRLF3-203ENST00000578692 ZNF536O15090 1300 aa18.75■□□□□ 0.59
CRLF3-203ENST00000578692 PGK1P00558 417 aa18.74■□□□□ 0.59
CRLF3-203ENST00000578692 MDM2Q00987 491 aaPredicted RBP18.74■□□□□ 0.59
CRLF3-203ENST00000578692 TKFCQ3LXA3 575 aa18.74■□□□□ 0.59
CRLF3-203ENST00000578692 AKNAD1Q5T1N1 836 aa18.74■□□□□ 0.59
CRLF3-203ENST00000578692 CWC27Q6UX04 472 aaKnown RBP18.74■□□□□ 0.59
CRLF3-203ENST00000578692 DCAF4Q8WV16 495 aa18.74■□□□□ 0.59
CRLF3-203ENST00000578692 FERMT2Q96AC1 680 aa18.74■□□□□ 0.59
CRLF3-203ENST00000578692 TMEM47Q9BQJ4 181 aa18.74■□□□□ 0.59
CRLF3-203ENST00000578692 ACAD9Q9H845 621 aa18.74■□□□□ 0.59
CRLF3-203ENST00000578692 FAM184BQ9ULE4 1060 aa18.74■□□□□ 0.59
CRLF3-203ENST00000578692 HIP1O00291 1037 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 SOX1O00570 391 aaPredicted RBP18.73■□□□□ 0.59
CRLF3-203ENST00000578692 TOP1P11387 765 aaKnown RBP18.73■□□□□ 0.59
CRLF3-203ENST00000578692 PCP11498 1178 aaKnown RBP18.73■□□□□ 0.59
CRLF3-203ENST00000578692 SNAP25P60880 206 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 ACVR2BQ13705 512 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 CCDC96Q2M329 555 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 CCDC174Q6PII3 467 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 RASGRP2Q7LDG7 609 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 TDHQ8IZJ6 230 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 TTC14Q96N46 770 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 TRERF1Q96PN7 1200 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 DIAPH3Q9NSV4 1193 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 RNF146Q9NTX7 359 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.73■□□□□ 0.59
CRLF3-203ENST00000578692 PRKAG2Q9UGJ0 569 aa18.73■□□□□ 0.59
CRLF3-203ENST00000578692 ZHX1Q9UKY1 873 aaPredicted RBP18.73■□□□□ 0.59
CRLF3-203ENST00000578692 RANBP2P49792 3224 aaKnown RBP18.73■□□□□ 0.59
CRLF3-203ENST00000578692 POTEB2H3BUK9 544 aa18.72■□□□□ 0.59
CRLF3-203ENST00000578692 ZNF213O14771 459 aa18.72■□□□□ 0.59
CRLF3-203ENST00000578692 ALAS1P13196 640 aa18.72■□□□□ 0.59
CRLF3-203ENST00000578692 FGD4Q96M96 766 aa18.72■□□□□ 0.59
CRLF3-203ENST00000578692 LBHD1Q9BQE6 289 aaPredicted RBP18.72■□□□□ 0.59
CRLF3-203ENST00000578692 ABHD16BQ9H3Z7 469 aa18.72■□□□□ 0.59
CRLF3-203ENST00000578692 RNF41Q9H4P4 317 aaPredicted RBP18.72■□□□□ 0.59
CRLF3-203ENST00000578692 PHF24Q9UPV7 400 aa18.72■□□□□ 0.59
CRLF3-203ENST00000578692 CNTN2Q02246 1040 aa18.71■□□□□ 0.59
CRLF3-203ENST00000578692 SNX17Q15036 470 aa18.71■□□□□ 0.59
CRLF3-203ENST00000578692 C1orf53Q5VUE5 145 aa18.71■□□□□ 0.59
CRLF3-203ENST00000578692 TTBK2Q6IQ55 1244 aa18.71■□□□□ 0.59
CRLF3-203ENST00000578692 BTNL9Q6UXG8 535 aa18.71■□□□□ 0.59
CRLF3-203ENST00000578692 FAM133AQ8N9E0 248 aa18.71■□□□□ 0.59
CRLF3-203ENST00000578692 LENG1Q96BZ8 264 aaPredicted RBP18.71■□□□□ 0.59
CRLF3-203ENST00000578692 LRCH3Q96II8 777 aa18.71■□□□□ 0.59
CRLF3-203ENST00000578692 A1CFQ9NQ94 594 aaKnown RBP18.71■□□□□ 0.59
CRLF3-203ENST00000578692 ADAMTS4O75173 837 aa18.7■□□□□ 0.58
CRLF3-203ENST00000578692 SLC16A2P36021 539 aa18.7■□□□□ 0.58
CRLF3-203ENST00000578692 LRIT3Q3SXY7 679 aa18.7■□□□□ 0.58
CRLF3-203ENST00000578692 TRIM60Q495X7 471 aa18.7■□□□□ 0.58
CRLF3-203ENST00000578692 ARMCX2Q7L311 632 aa18.7■□□□□ 0.58
CRLF3-203ENST00000578692 TBC1D10CQ8IV04 446 aa18.7■□□□□ 0.58
CRLF3-203ENST00000578692 CCDC144CPQ8IYA2 1237 aa18.7■□□□□ 0.58
CRLF3-203ENST00000578692 ESR2Q92731 530 aa18.7■□□□□ 0.58
CRLF3-203ENST00000578692 TSEN34Q9BSV6 310 aaKnown RBP18.7■□□□□ 0.58
CRLF3-203ENST00000578692 DNAH12Q6ZR08 3092 aa18.7■□□□□ 0.58
CRLF3-203ENST00000578692 DUSP11O75319 330 aaKnown RBP18.69■□□□□ 0.58
CRLF3-203ENST00000578692 CCDC144BQ3MJ40 725 aa18.69■□□□□ 0.58
CRLF3-203ENST00000578692 MUM1L1Q5H9M0 696 aa18.69■□□□□ 0.58
CRLF3-203ENST00000578692 RANBP17Q9H2T7 1088 aaKnown RBP18.69■□□□□ 0.58
CRLF3-203ENST00000578692 GPCPD1Q9NPB8 672 aa18.69■□□□□ 0.58
CRLF3-203ENST00000578692 CCPG1Q9ULG6 757 aa18.69■□□□□ 0.58
CRLF3-203ENST00000578692 A0A1W2PQ45 241 aaPredicted RBP18.68■□□□□ 0.58
CRLF3-203ENST00000578692 A0A1W2PQY0 241 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 SOWAHBA6NEL2 793 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 ICAM1P05362 532 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 PDHBP11177 359 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 SYDE2Q5VT97 1194 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 KLHDC9Q8NEP7 349 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 ZKSCAN3Q9BRR0 538 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 DSCC1Q9BVC3 393 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 PRDM5Q9NQX1 630 aaPredicted RBP18.68■□□□□ 0.58
CRLF3-203ENST00000578692 FRMPD2Q68DX3 1309 aaPredicted RBP18.68■□□□□ 0.58
CRLF3-203ENST00000578692 SYNRGQ9UMZ2 1314 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 NEDD4P46934 1319 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 ASB14A6NK59 587 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 NT5C2P49902 561 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 TLE2Q04725 743 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 KCNA10Q16322 511 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 DGKHQ86XP1 1220 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 NUP133Q8WUM0 1156 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 KATNBL1Q9H079 304 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 SPC25Q9HBM1 224 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 CYP39A1Q9NYL5 469 aa18.68■□□□□ 0.58
CRLF3-203ENST00000578692 MCM3APO60318 1980 aa18.67■□□□□ 0.58
CRLF3-203ENST00000578692 SZT2Q5T011 3432 aa18.67■□□□□ 0.58
CRLF3-203ENST00000578692 MOXD2PA6NHM9 499 aa18.67■□□□□ 0.58
CRLF3-203ENST00000578692 ADCY6O43306 1168 aa18.67■□□□□ 0.58
CRLF3-203ENST00000578692 PDE4AP27815 886 aa18.67■□□□□ 0.58
CRLF3-203ENST00000578692 ACLYP53396 1101 aa18.67■□□□□ 0.58
CRLF3-203ENST00000578692 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
CRLF3-203ENST00000578692 CCDC178Q5BJE1 867 aa18.67■□□□□ 0.58
CRLF3-203ENST00000578692 CCSAPQ6IQ19 270 aaPredicted RBP18.67■□□□□ 0.58
CRLF3-203ENST00000578692 NSMFQ6X4W1 530 aa18.67■□□□□ 0.58
CRLF3-203ENST00000578692 CTNNA3Q9UI47 895 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms