RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 VPS53Q5VIR6 699 aa16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 FAM133AQ8N9E0 248 aa16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 CHST13Q8NET6 341 aa16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 DDX11Q96FC9 970 aa16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 GMCL1Q96IK5 515 aa16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 NAPBQ9H115 298 aa16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 FAM184BQ9ULE4 1060 aa16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 LCTP09848 1927 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 CHD7Q9P2D1 2997 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 TMEM232C9JQI7 657 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 NMT2O60551 498 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 DUSP11O75319 330 aaKnown RBP16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 FGRP09769 529 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 CNTN2Q02246 1040 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 CTDSPL2Q05D32 466 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 PDE4BQ07343 736 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 KCNA10Q16322 511 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 LRRFIP1Q32MZ4 808 aaKnown RBP16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 FAM161BQ96MY7 647 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 TOX2Q96NM4 488 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 NACAP1Q9BZK3 213 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 UPF3AQ9H1J1 476 aaKnown RBP16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 TTYH1Q9H313 450 aaPredicted RBP16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 ANAPC4Q9UJX5 808 aa16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 ZHX1Q9UKY1 873 aaPredicted RBP16.13■□□□□ 0.17
CUEDC1-203ENST00000577422 MOXD2PA6NHM9 499 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 PLA2G6O60733 806 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 PQBP1O60828 265 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 SLC4A3P48751 1232 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 CDK7P50613 346 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 STAT2P52630 851 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 RRP1P56182 461 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 GJA9P57773 515 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 NKX3-2P78367 333 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 CCDC144BQ3MJ40 725 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 ARMCX2Q7L311 632 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 CCDC144CPQ8IYA2 1237 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 ANKRD35Q8N283 1001 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 AGBL1Q96MI9 1066 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 ABHD16BQ9H3Z7 469 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 A1CFQ9NQ94 594 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 FBXO40Q9UH90 709 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 TBX21Q9UL17 535 aa16.12■□□□□ 0.17
CUEDC1-203ENST00000577422 REV3LO60673 3130 aa16.11■□□□□ 0.17
CUEDC1-203ENST00000577422 SOWAHBA6NEL2 793 aa16.11■□□□□ 0.17
CUEDC1-203ENST00000577422 FDX1P10109 184 aa16.11■□□□□ 0.17
CUEDC1-203ENST00000577422 MCCP23508 829 aa16.11■□□□□ 0.17
CUEDC1-203ENST00000577422 SMAD3P84022 425 aaKnown RBP16.11■□□□□ 0.17
CUEDC1-203ENST00000577422 STAG1Q8WVM7 1258 aa16.11■□□□□ 0.17
CUEDC1-203ENST00000577422 SEMA6BQ9H3T3 888 aa16.11■□□□□ 0.17
CUEDC1-203ENST00000577422 STARD7Q9NQZ5 370 aa16.11■□□□□ 0.17
CUEDC1-203ENST00000577422 HOMER2Q9NSB8 354 aa16.11■□□□□ 0.17
CUEDC1-203ENST00000577422 DDX49Q9Y6V7 483 aaKnown RBP16.11■□□□□ 0.17
CUEDC1-203ENST00000577422 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.1■□□□□ 0.17
CUEDC1-203ENST00000577422 PTGS1P23219 599 aa16.1■□□□□ 0.17
CUEDC1-203ENST00000577422 SLC1A4P43007 532 aa16.1■□□□□ 0.17
CUEDC1-203ENST00000577422 ZNF697Q5TEC3 545 aa16.1■□□□□ 0.17
CUEDC1-203ENST00000577422 KCTD1Q719H9 257 aa16.1■□□□□ 0.17
CUEDC1-203ENST00000577422 FAM160B2Q86V87 743 aa16.1■□□□□ 0.17
CUEDC1-203ENST00000577422 CHMP4CQ96CF2 233 aa16.1■□□□□ 0.17
CUEDC1-203ENST00000577422 CDX2Q99626 313 aaPredicted RBP16.1■□□□□ 0.17
CUEDC1-203ENST00000577422 ACAD9Q9H845 621 aa16.1■□□□□ 0.17
CUEDC1-203ENST00000577422 ELP1O95163 1332 aa16.1■□□□□ 0.17
CUEDC1-203ENST00000577422 ASGR1P07306 291 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 SLC3A2P08195 630 aaKnown RBP16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 PDE1AP54750 535 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 SNAP25P60880 206 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 ALX1Q15699 326 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 MUM1L1Q5H9M0 696 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 RCSD1Q6JBY9 416 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 CHURC1Q8WUH1 139 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 CRBNQ96SW2 442 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 RNF146Q9NTX7 359 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 TMEM39AQ9NV64 488 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 PRR12Q9ULL5 1215 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 STX8Q9UNK0 236 aa16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 GNEQ9Y223 722 aaKnown RBP16.09■□□□□ 0.17
CUEDC1-203ENST00000577422 XIRP2A4UGR9 3374 aa16.08■□□□□ 0.17
CUEDC1-203ENST00000577422 A0A0D9SFI3 127 aa16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 TSPY2A6NKD2 308 aa16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 ORC4O43929 436 aa16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 C6orf222P0C671 652 aaPredicted RBP16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 RAG1P15918 1043 aa16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 HDAC1Q13547 482 aaPredicted RBP16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 TMEM63BQ5T3F8 832 aa16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 ANKRD45Q5TZF3 282 aa16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 C16orf59Q7L2K0 433 aa16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 EVI5LQ96CN4 794 aa16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 FAM227BQ96M60 508 aa16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 TRERF1Q96PN7 1200 aa16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 CTDP1Q9Y5B0 961 aaPredicted RBP16.08■□□□□ 0.16
CUEDC1-203ENST00000577422 TIMP1P01033 207 aa16.07■□□□□ 0.16
CUEDC1-203ENST00000577422 FGAP02671 866 aa16.07■□□□□ 0.16
CUEDC1-203ENST00000577422 FPGSQ05932 587 aa16.07■□□□□ 0.16
CUEDC1-203ENST00000577422 TKFCQ3LXA3 575 aa16.07■□□□□ 0.16
CUEDC1-203ENST00000577422 ZNF589Q86UQ0 364 aaPredicted RBP16.07■□□□□ 0.16
CUEDC1-203ENST00000577422 FAM126BQ8IXS8 530 aa16.07■□□□□ 0.16
CUEDC1-203ENST00000577422 SLC43A3Q8NBI5 491 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms