RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 ADCYAP1R1P41586 468 aa17.64■□□□□ 0.41
MKS1-205ENST00000577315 TSEN34Q9BSV6 310 aaKnown RBP17.64■□□□□ 0.41
MKS1-205ENST00000577315 ABHD16BQ9H3Z7 469 aa17.64■□□□□ 0.41
MKS1-205ENST00000577315 ATP11BQ9Y2G3 1177 aa17.64■□□□□ 0.41
MKS1-205ENST00000577315 SNAI1O95863 264 aaPredicted RBP17.63■□□□□ 0.41
MKS1-205ENST00000577315 TAL1P17542 331 aaPredicted RBP17.63■□□□□ 0.41
MKS1-205ENST00000577315 MFSD6Q6ZSS7 791 aa17.63■□□□□ 0.41
MKS1-205ENST00000577315 PLEKHM2Q8IWE5 1019 aa17.63■□□□□ 0.41
MKS1-205ENST00000577315 RNF41Q9H4P4 317 aaPredicted RBP17.63■□□□□ 0.41
MKS1-205ENST00000577315 INCENPQ9NQS7 918 aa17.63■□□□□ 0.41
MKS1-205ENST00000577315 DNAH12Q6ZR08 3092 aa17.62■□□□□ 0.41
MKS1-205ENST00000577315 NMT2O60551 498 aa17.62■□□□□ 0.41
MKS1-205ENST00000577315 DUSP11O75319 330 aaKnown RBP17.62■□□□□ 0.41
MKS1-205ENST00000577315 TOP1P11387 765 aaKnown RBP17.62■□□□□ 0.41
MKS1-205ENST00000577315 SDSP20132 328 aa17.62■□□□□ 0.41
MKS1-205ENST00000577315 MDM2Q00987 491 aaPredicted RBP17.62■□□□□ 0.41
MKS1-205ENST00000577315 ACVR2BQ13705 512 aa17.62■□□□□ 0.41
MKS1-205ENST00000577315 RRP12Q5JTH9 1297 aaKnown RBP17.62■□□□□ 0.41
MKS1-205ENST00000577315 AKNAD1Q5T1N1 836 aa17.62■□□□□ 0.41
MKS1-205ENST00000577315 KCTD1Q719H9 257 aa17.62■□□□□ 0.41
MKS1-205ENST00000577315 ZNF589Q86UQ0 364 aaPredicted RBP17.62■□□□□ 0.41
MKS1-205ENST00000577315 EXOC6Q8TAG9 804 aa17.62■□□□□ 0.41
MKS1-205ENST00000577315 TTC14Q96N46 770 aa17.62■□□□□ 0.41
MKS1-205ENST00000577315 RNF146Q9NTX7 359 aa17.62■□□□□ 0.41
MKS1-205ENST00000577315 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.62■□□□□ 0.41
MKS1-205ENST00000577315 ZHX1Q9UKY1 873 aaPredicted RBP17.62■□□□□ 0.41
MKS1-205ENST00000577315 PRR12Q9ULL5 1215 aa17.62■□□□□ 0.41
MKS1-205ENST00000577315 MOXD2PA6NHM9 499 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 ASB14A6NK59 587 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 POTEB2H3BUK9 544 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 SOX1O00570 391 aaPredicted RBP17.61■□□□□ 0.41
MKS1-205ENST00000577315 ADAMTS4O75173 837 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 PGK1P00558 417 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 IGHDP01880 384 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 CCDC96Q2M329 555 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 TRIM60Q495X7 471 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 NUP133Q8WUM0 1156 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 FERMT2Q96AC1 680 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 SPC25Q9HBM1 224 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 HOMER2Q9NSB8 354 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 PNMA2Q9UL42 364 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 TACC3Q9Y6A5 838 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 ZNF536O15090 1300 aa17.61■□□□□ 0.41
MKS1-205ENST00000577315 SZT2Q5T011 3432 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 ALAS1P13196 640 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 CCDC178Q5BJE1 867 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 BTNL9Q6UXG8 535 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 ARMCX2Q7L311 632 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 FAM133AQ8N9E0 248 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 PCSK9Q8NBP7 692 aaKnown RBP17.6■□□□□ 0.41
MKS1-205ENST00000577315 LRCH3Q96II8 777 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 AGBL1Q96MI9 1066 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 TRERF1Q96PN7 1200 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 TMEM47Q9BQJ4 181 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 A1CFQ9NQ94 594 aaKnown RBP17.6■□□□□ 0.41
MKS1-205ENST00000577315 DIAPH3Q9NSV4 1193 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 MYH6P13533 1939 aa17.6■□□□□ 0.41
MKS1-205ENST00000577315 SYNRGQ9UMZ2 1314 aa17.59■□□□□ 0.41
MKS1-205ENST00000577315 A0A1W2PQ45 241 aaPredicted RBP17.59■□□□□ 0.41
MKS1-205ENST00000577315 A0A1W2PQY0 241 aa17.59■□□□□ 0.41
MKS1-205ENST00000577315 ZNF213O14771 459 aa17.59■□□□□ 0.41
MKS1-205ENST00000577315 ICAM1P05362 532 aa17.59■□□□□ 0.41
MKS1-205ENST00000577315 CST5P28325 142 aaPredicted RBP17.59■□□□□ 0.41
MKS1-205ENST00000577315 KLHDC9Q8NEP7 349 aa17.59■□□□□ 0.41
MKS1-205ENST00000577315 ESR2Q92731 530 aa17.59■□□□□ 0.41
MKS1-205ENST00000577315 FGD4Q96M96 766 aa17.59■□□□□ 0.41
MKS1-205ENST00000577315 ACLYP53396 1101 aa17.58■□□□□ 0.4
MKS1-205ENST00000577315 HAND2P61296 217 aa17.58■□□□□ 0.4
MKS1-205ENST00000577315 CCDC144BQ3MJ40 725 aa17.58■□□□□ 0.4
MKS1-205ENST00000577315 CCDC174Q6PII3 467 aa17.58■□□□□ 0.4
MKS1-205ENST00000577315 CCDC144CPQ8IYA2 1237 aa17.58■□□□□ 0.4
MKS1-205ENST00000577315 TOX2Q96NM4 488 aa17.58■□□□□ 0.4
MKS1-205ENST00000577315 RANBP17Q9H2T7 1088 aaKnown RBP17.58■□□□□ 0.4
MKS1-205ENST00000577315 PRDM5Q9NQX1 630 aaPredicted RBP17.58■□□□□ 0.4
MKS1-205ENST00000577315 STARD7Q9NQZ5 370 aa17.58■□□□□ 0.4
MKS1-205ENST00000577315 PDLIM7Q9NR12 457 aa17.58■□□□□ 0.4
MKS1-205ENST00000577315 CCPG1Q9ULG6 757 aa17.58■□□□□ 0.4
MKS1-205ENST00000577315 MTMR7Q9Y216 660 aa17.58■□□□□ 0.4
MKS1-205ENST00000577315 LCTP09848 1927 aa17.58■□□□□ 0.4
MKS1-205ENST00000577315 LOC102724159A0A0B4J2E5 919 aa17.57■□□□□ 0.4
MKS1-205ENST00000577315 CLTBP09497 229 aa17.57■□□□□ 0.4
MKS1-205ENST00000577315 GJA9P57773 515 aa17.57■□□□□ 0.4
MKS1-205ENST00000577315 CNTN2Q02246 1040 aa17.57■□□□□ 0.4
MKS1-205ENST00000577315 TLE2Q04725 743 aa17.57■□□□□ 0.4
MKS1-205ENST00000577315 PWP2Q15269 919 aaKnown RBP17.57■□□□□ 0.4
MKS1-205ENST00000577315 SYDE2Q5VT97 1194 aa17.57■□□□□ 0.4
MKS1-205ENST00000577315 CWC27Q6UX04 472 aaKnown RBP17.57■□□□□ 0.4
MKS1-205ENST00000577315 CHMP4CQ96CF2 233 aa17.57■□□□□ 0.4
MKS1-205ENST00000577315 GLT1D1Q96MS3 346 aa17.57■□□□□ 0.4
MKS1-205ENST00000577315 UPF3AQ9H1J1 476 aaKnown RBP17.57■□□□□ 0.4
MKS1-205ENST00000577315 LAMA3Q16787 3333 aa17.57■□□□□ 0.4
MKS1-205ENST00000577315 ELP1O95163 1332 aa17.56■□□□□ 0.4
MKS1-205ENST00000577315 MROH7Q68CQ1 1323 aa17.56■□□□□ 0.4
MKS1-205ENST00000577315 C6orf222P0C671 652 aaPredicted RBP17.56■□□□□ 0.4
MKS1-205ENST00000577315 PDHBP11177 359 aa17.56■□□□□ 0.4
MKS1-205ENST00000577315 KCNA10Q16322 511 aa17.56■□□□□ 0.4
MKS1-205ENST00000577315 CCSAPQ6IQ19 270 aaPredicted RBP17.56■□□□□ 0.4
MKS1-205ENST00000577315 IQCA1Q86XH1 822 aa17.56■□□□□ 0.4
MKS1-205ENST00000577315 DGKHQ86XP1 1220 aa17.56■□□□□ 0.4
MKS1-205ENST00000577315 LENG1Q96BZ8 264 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms